Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g006980.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT2G35330.2)
Sequence	ATGAGTTCTAAGGAGAAGTATATGAGGAACAATCGAAGATCAAGATCGGGTAGAACCGAT CATGATTATAATAGCCAAAGCAGTAGTAACCGTAACCGTAACCGTAGTTCTTTAGATTTT TCTGGAATTTCTGAATCTGGGGTTCGTCAATTGAATGCTGAGAGTGAAACAGCTCAACAG TCCAACCCGATTAATGTTGGGTCGGATGGGGATTCGGGGTCAGGTTCTGGGGTTGATGAG GGTGGGTTGAATATATGTACTGAGGATCAATTGGAAGCTATCTTGTTGCAAAAATTGGAG GTTTTGTATGGTGAGGCTATTGCTAAGATTACGAAGTTGGGTTATGGTGAGGAGGGTGTT ATGAAAGCTATGTTGAAAAATGGTCATTGTTATGGTGGGATGGATGTTTTGACTAATATT TTACATAACGCGCTGTCGTATTTGAATAATGGGTATGTAAATAGCGGGAGTTCTTCGAGT GGGGATGAATCAGACCAATCTTTTGTTGATTTAAGACAGTTAGTGGAGTATTCGTTAGCG GGTCTGATTTGCTTGTTGCAACAAATGAAACCACATTTAAGTAAAGCGGATGCGATGTGG TGCTTGTTGGTTAGTGATCTTCATGTGGGTAGGGCGAGTGTGATGGAAATTCCTGATGGG AGTGGTCGTACTACTGGGTCGCTGAGTGGTGGTGGTACTAGTACTAATGTGGAGGGTGTT GCTACTGGTCCTATTGGGGTTGTGCCTGCGATGTGTAGGTTTCATGGGGGCTGGGGTTTT GGGAATAGCACTGGTAATGCATATCCGTTAAATAAGTCTTCTGCAATTACCTCTGATTCT ACTCCATATAAAGAGATTGATTGTCCTAAGAGGTTTAACCTTACTCCGTCAATGAGAACC TTGCTAAAGAGGAATGTAGCTGCGTTTACGGCTGGACTTAGGTCAAACCCTAAGTATATG CAGAGCCAGTCCCGGGTTTCCTCTAGTTCCCTGACTGATGGGGATCAATCAAGTGGGCTT GCTCAGTCGGGTGTCTCACAAACTTCGAAAAGCCAAGATGTTAACTGTGTGGTAGGTAAA TTTCAAGATTTGAATCTTGATGAAAATACACAGCAGCAGAGCAAGGGCAATGAAGATCTG GACCAGAAAGATGAGATGCTACTAAGTCTGCTCGATCAGATAAAGGATCTTGAGAAACAG GTCAAGGAAAGGAAAGATTGGGCGCACCAAAAAGCTATGCAGGCTGCTAGGAAGCTTAGC AATGACTTGACAGAGCTGAAAATGTTGAGGATGGAGAAGGAGGATATCCAGAGAATGAAG AAAGGCAAACCTGCTGTAGAAGATGCTACCATGAAGAAATTATCAGAAATGGAGACTAGT TTAAGAACAGCAAGCGCGAATGTTGATCGGTCAAACATGTTTGTGAAAAAACTTCAGGAG GATAACGCAGAAATGAAGGCGGAGCTGGAGGCCCAGAAGCTAAGCGCTTCGGAATCTGCG AAAAAATGCGCGGAAGCTGCAAAAAGGGAGAAAAAGTGCTTGAAGAAGCTTGCTGTTTGG GACAAAAAGAAAAAGAAGCTTCAGGAGGAAATTGCAGCTGAGAAACAAAATATTTCAGAC ATGCAAAACCAGCTGGCTCAGTCAGAGGTAGCTATAAAAGATGCTGAGGTCAAATGGAGG CTGGAACAGAAGGCTAGGCAGCAAGCATCTGCACTAGTGGATGAAGAACGACGTTTGAAA GAAGCAGTCGAGGCTAACAACAAAAGGAAGCTTGAGGAATTGCGCTCAAAGGCAGAAATA GACTTCCAGCGGCACAAGGATGACTTGCAAAGGCTTGAACAGGATCTTTCTCGGCTTAAA GCATCTACTGAGCTGCAGAATCAGTCAGCTAATGTAGTAACAGGTTCTAACGTGGAACAG CACCCGCATGGAGATATTGCAAGGATGTTACGTGAGTTAGATAATTCCCAGGAGTATTCT CCCGTGAAGGAAGACTCTAGGGAGTGTATCATATGCATGAAGCATGAAGTTTCAGTTGTT TTCCTACCTTGTGCTCATCAGGTTCTGTGTTCCAGCTGCAACGACAACTTTGGAAAGAAG GGAAGAGTTTCTAAATGTCCATGCTGCAGGGCTCCAATTGAACGGAGGATCCGTGTCTTT GGTGCAACATCCTAA

Peptide Sequence

PEP ID	Solyc08g006980.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT2G35330.2)
Sequence	MSSKEKYMRNNRRSRSGRTDHDYNSQSSSNRNRNRSSLDFSGISESGVRQLNAESETAQQ SNPINVGSDGDSGSGSGVDEGGLNICTEDQLEAILLQKLEVLYGEAIAKITKLGYGEEGV MKAMLKNGHCYGGMDVLTNILHNALSYLNNGYVNSGSSSSGDESDQSFVDLRQLVEYSLA GLICLLQQMKPHLSKADAMWCLLVSDLHVGRASVMEIPDGSGRTTGSLSGGGTSTNVEGV ATGPIGVVPAMCRFHGGWGFGNSTGNAYPLNKSSAITSDSTPYKEIDCPKRFNLTPSMRT LLKRNVAAFTAGLRSNPKYMQSQSRVSSSSLTDGDQSSGLAQSGVSQTSKSQDVNCVVGK FQDLNLDENTQQQSKGNEDLDQKDEMLLSLLDQIKDLEKQVKERKDWAHQKAMQAARKLS NDLTELKMLRMEKEDIQRMKKGKPAVEDATMKKLSEMETSLRTASANVDRSNMFVKKLQE DNAEMKAELEAQKLSASESAKKCAEAAKREKKCLKKLAVWDKKKKKLQEEIAAEKQNISD MQNQLAQSEVAIKDAEVKWRLEQKARQQASALVDEERRLKEAVEANNKRKLEELRSKAEI DFQRHKDDLQRLEQDLSRLKASTELQNQSANVVTGSNVEQHPHGDIARMLRELDNSQEYS PVKEDSRECIICMKHEVSVVFLPCAHQVLCSSCNDNFGKKGRVSKCPCCRAPIERRIRVF GATS*

Transcript Sequence

Transcript ID	Solyc08g006980.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT2G35330.2)
Sequence	CATATATATATATGTCCAATTCTGTGTGTTGTCATTTGTAAACCTTCACTACGCAATTCT CTATGTGTGTGTAACCGAAGAAGGCGATAATCTCAAAGCTGTTTGTTTTGATGTTTTAGT GAAAATTGAATTTCCCAAATGAGTTCTAAGGAGAAGTATATGAGGAACAATCGAAGATCA AGATCGGGTAGAACCGATCATGATTATAATAGCCAAAGCAGTAGTAACCGTAACCGTAAC CGTAGTTCTTTAGATTTTTCTGGAATTTCTGAATCTGGGGTTCGTCAATTGAATGCTGAG AGTGAAACAGCTCAACAGTCCAACCCGATTAATGTTGGGTCGGATGGGGATTCGGGGTCA GGTTCTGGGGTTGATGAGGGTGGGTTGAATATATGTACTGAGGATCAATTGGAAGCTATC TTGTTGCAAAAATTGGAGGTTTTGTATGGTGAGGCTATTGCTAAGATTACGAAGTTGGGT TATGGTGAGGAGGGTGTTATGAAAGCTATGTTGAAAAATGGTCATTGTTATGGTGGGATG GATGTTTTGACTAATATTTTACATAACGCGCTGTCGTATTTGAATAATGGGTATGTAAAT AGCGGGAGTTCTTCGAGTGGGGATGAATCAGACCAATCTTTTGTTGATTTAAGACAGTTA GTGGAGTATTCGTTAGCGGGTCTGATTTGCTTGTTGCAACAAATGAAACCACATTTAAGT AAAGCGGATGCGATGTGGTGCTTGTTGGTTAGTGATCTTCATGTGGGTAGGGCGAGTGTG ATGGAAATTCCTGATGGGAGTGGTCGTACTACTGGGTCGCTGAGTGGTGGTGGTACTAGT ACTAATGTGGAGGGTGTTGCTACTGGTCCTATTGGGGTTGTGCCTGCGATGTGTAGGTTT CATGGGGGCTGGGGTTTTGGGAATAGCACTGGTAATGCATATCCGTTAAATAAGTCTTCT GCAATTACCTCTGATTCTACTCCATATAAAGAGATTGATTGTCCTAAGAGGTTTAACCTT ACTCCGTCAATGAGAACCTTGCTAAAGAGGAATGTAGCTGCGTTTACGGCTGGACTTAGG TCAAACCCTAAGTATATGCAGAGCCAGTCCCGGGTTTCCTCTAGTTCCCTGACTGATGGG GATCAATCAAGTGGGCTTGCTCAGTCGGGTGTCTCACAAACTTCGAAAAGCCAAGATGTT AACTGTGTGGTAGGTAAATTTCAAGATTTGAATCTTGATGAAAATACACAGCAGCAGAGC AAGGGCAATGAAGATCTGGACCAGAAAGATGAGATGCTACTAAGTCTGCTCGATCAGATA AAGGATCTTGAGAAACAGGTCAAGGAAAGGAAAGATTGGGCGCACCAAAAAGCTATGCAG GCTGCTAGGAAGCTTAGCAATGACTTGACAGAGCTGAAAATGTTGAGGATGGAGAAGGAG GATATCCAGAGAATGAAGAAAGGCAAACCTGCTGTAGAAGATGCTACCATGAAGAAATTA TCAGAAATGGAGACTAGTTTAAGAACAGCAAGCGCGAATGTTGATCGGTCAAACATGTTT GTGAAAAAACTTCAGGAGGATAACGCAGAAATGAAGGCGGAGCTGGAGGCCCAGAAGCTA AGCGCTTCGGAATCTGCGAAAAAATGCGCGGAAGCTGCAAAAAGGGAGAAAAAGTGCTTG AAGAAGCTTGCTGTTTGGGACAAAAAGAAAAAGAAGCTTCAGGAGGAAATTGCAGCTGAG AAACAAAATATTTCAGACATGCAAAACCAGCTGGCTCAGTCAGAGGTAGCTATAAAAGAT GCTGAGGTCAAATGGAGGCTGGAACAGAAGGCTAGGCAGCAAGCATCTGCACTAGTGGAT GAAGAACGACGTTTGAAAGAAGCAGTCGAGGCTAACAACAAAAGGAAGCTTGAGGAATTG CGCTCAAAGGCAGAAATAGACTTCCAGCGGCACAAGGATGACTTGCAAAGGCTTGAACAG GATCTTTCTCGGCTTAAAGCATCTACTGAGCTGCAGAATCAGTCAGCTAATGTAGTAACA GGTTCTAACGTGGAACAGCACCCGCATGGAGATATTGCAAGGATGTTACGTGAGTTAGAT AATTCCCAGGAGTATTCTCCCGTGAAGGAAGACTCTAGGGAGTGTATCATATGCATGAAG CATGAAGTTTCAGTTGTTTTCCTACCTTGTGCTCATCAGGTTCTGTGTTCCAGCTGCAAC GACAACTTTGGAAAGAAGGGAAGAGTTTCTAAATGTCCATGCTGCAGGGCTCCAATTGAA CGGAGGATCCGTGTCTTTGGTGCAACATCCTAAGCCTTCATCCCAGCTTTTATCATGGCA TGCTCGTAAACTGTCGGTTAGACTATAAAACAATGTTTTATTTCCTGCATTATCTTAAAA CTTATGCTAGTAGACTATGCTATCTTCAAACTTATGCTCATAGAAGATATACTAAGTAAG CAGCTCATTGTGTTGTAATGGGTACTCTTTAAACAGGCTTTTCTGAAAATGTTTTTTCCC ATCGTAGATGGGGGCAAACAAAAAAAAAACTCTCTTTGATATATTTTGCAGGTTCTTATC TTGACATGTGTGTTTGA