Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g006970.3.1
CDS Infomation

Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A118JUZ5_CYNCS)
Sequence

ATGGCTACTCCAATCACAAAACCCCCATCACCTGCTTGTACCAAAATCATAGAAGAAATC
ACAAGGATTTACAAATCACTACCACCAAGACCATCCATTTTAGAGATTGAAGCTTCAATT
TCTGTTGTAAAATCAGTAGAAACAGAAGAAAAAATAGAACTTGATGAAATTTCAAAGAGA
AGAGTTGAGATAGAAGAAAGTGTTCCAGCTGAGCTTTACTCTGTGTTAGAAAAAGTGAGA
AAAGCTATGGTTCTGTTCCAAAGCAAAGAACAGAAGAAAGAGGCTGTTGAGTTGATTGAG
CTTGATAAGACTTATCAAGATTTTGATGAGTTGATTCAGGAAGCTACAGAGTTGGTTTGT
GAAGATACCCAAATGGGAAAAATCAATTCTTTTGAGGACCCAATGGTTGAAATTGGAAAA
AAGGATGAGGTTTTGAAGAAGGGTTTGGTTACAAGTGGTGAATTGATTAATGTTTCTTCT
TCAGGGATCAAGCACAAAGAGAAGTACAGCTTGATGAAAGTAGCTGCCCTAATTGAAAAT
GCCGCCAAAACTCGAGCAAGAGTTGTTGATCTTCAGAACAAGTTAATGGACAAGATTGAA
TGGCTTCCATTGTCACTTGGGAAATTGGTGAATGTCACTGAGCTAAACGTTGCCGATAAC
CAGATCATGGCTCTTCCAACTACCATTGGTAGCCTTAATGGCTTAACGAAGCTCGATCTT
CACTCCAACCAAATTATAAACCTTCCTGATTCATTTGGTGAGCTAATCAATTTGACTGAT
CTTGACCTCCACGCGAACAGGTTGAAATCGCTGCCAGCTTCTTTCAGGAACTTAGTAAAT
CTGATCGATCTTGATTTGGGTTCGAACAGGTTCACTCATTTGCCTGATTTCGTTGGGAAC
TTAACCTCCTTGAAGAGACTAAACGTGGAAACAAATCAGCTCGAGGAACTTCCTTACACT
ATAGGATTTTGTTCTTCCCTTGTAGAACTGAGATTGGATTTTAATCAGCTTAAAGCTCTC
CCCGAGGCAATGGGAATGCTCGAACACTTGGAGATTCTTACGCTACACATTAACAGAATC
AAAGGATTACCAACAACAATGGGGAATCTTTCTCGCCTAAGGGAACTTGATGTTAGCTTC
AACGAAGTTGAGAACATACCCGAAACATTCTGTTTTGCTGTCAGCTTGGAAAAGCTTAAT
CTTGCAAACAACTTTGCGGACTTGAAAACTTTACCAAGATCAATCGGAAACCTTGAGAAT
CTTGAAGAGCTTGATATTAGCAACAGTCAAATAAGAACGTTGCCCGACTCCTTCAGGCTC
TTGTCAAAGTTGAAAACTTTTCGAGCTGATGAGACTCCGCTAGAAGTACCACCAAGGCAA
ATTATAAAGCTCGGGGCTCAGGTTGTTGTAGAGTACATGGCTGAATTCGTAACTAAGAAC
GAGCTTCAATTGCAGCGGCCTAAGAGGAGACCTTTCTTTTGTCCAAGTTGCCTGTTTCCT
AAAACCGAGGGGAAGAGGCGGATCTAG

Peptide Sequence

PEP ID

Solyc08g006970.3.1
PEP Infomation

Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A118JUZ5_CYNCS)
Sequence

MATPITKPPSPACTKIIEEITRIYKSLPPRPSILEIEASISVVKSVETEEKIELDEISKR
RVEIEESVPAELYSVLEKVRKAMVLFQSKEQKKEAVELIELDKTYQDFDELIQEATELVC
EDTQMGKINSFEDPMVEIGKKDEVLKKGLVTSGELINVSSSGIKHKEKYSLMKVAALIEN
AAKTRARVVDLQNKLMDKIEWLPLSLGKLVNVTELNVADNQIMALPTTIGSLNGLTKLDL
HSNQIINLPDSFGELINLTDLDLHANRLKSLPASFRNLVNLIDLDLGSNRFTHLPDFVGN
LTSLKRLNVETNQLEELPYTIGFCSSLVELRLDFNQLKALPEAMGMLEHLEILTLHINRI
KGLPTTMGNLSRLRELDVSFNEVENIPETFCFAVSLEKLNLANNFADLKTLPRSIGNLEN
LEELDISNSQIRTLPDSFRLLSKLKTFRADETPLEVPPRQIIKLGAQVVVEYMAEFVTKN
ELQLQRPKRRPFFCPSCLFPKTEGKRRI*

Transcript Sequence

Transcript ID

Solyc08g006970.3.1
Transcript Infomation

Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A118JUZ5_CYNCS)
Sequence

TCAAATATAGATACTTGACTTAATTTAGCTTATGAATTAAGACTCGAGATGCTCAACCAT
TTGAACTCGGAGATAATAGTTACAAGCATAATAAATACATAATCCAAACAATTAATTTCT
CCATCATTTCTTCTTTGTTCACCATGGCTACTCCAATCACAAAACCCCCATCACCTGCTT
GTACCAAAATCATAGAAGAAATCACAAGGATTTACAAATCACTACCACCAAGACCATCCA
TTTTAGAGATTGAAGCTTCAATTTCTGTTGTAAAATCAGTAGAAACAGAAGAAAAAATAG
AACTTGATGAAATTTCAAAGAGAAGAGTTGAGATAGAAGAAAGTGTTCCAGCTGAGCTTT
ACTCTGTGTTAGAAAAAGTGAGAAAAGCTATGGTTCTGTTCCAAAGCAAAGAACAGAAGA
AAGAGGCTGTTGAGTTGATTGAGCTTGATAAGACTTATCAAGATTTTGATGAGTTGATTC
AGGAAGCTACAGAGTTGGTTTGTGAAGATACCCAAATGGGAAAAATCAATTCTTTTGAGG
ACCCAATGGTTGAAATTGGAAAAAAGGATGAGGTTTTGAAGAAGGGTTTGGTTACAAGTG
GTGAATTGATTAATGTTTCTTCTTCAGGGATCAAGCACAAAGAGAAGTACAGCTTGATGA
AAGTAGCTGCCCTAATTGAAAATGCCGCCAAAACTCGAGCAAGAGTTGTTGATCTTCAGA
ACAAGTTAATGGACAAGATTGAATGGCTTCCATTGTCACTTGGGAAATTGGTGAATGTCA
CTGAGCTAAACGTTGCCGATAACCAGATCATGGCTCTTCCAACTACCATTGGTAGCCTTA
ATGGCTTAACGAAGCTCGATCTTCACTCCAACCAAATTATAAACCTTCCTGATTCATTTG
GTGAGCTAATCAATTTGACTGATCTTGACCTCCACGCGAACAGGTTGAAATCGCTGCCAG
CTTCTTTCAGGAACTTAGTAAATCTGATCGATCTTGATTTGGGTTCGAACAGGTTCACTC
ATTTGCCTGATTTCGTTGGGAACTTAACCTCCTTGAAGAGACTAAACGTGGAAACAAATC
AGCTCGAGGAACTTCCTTACACTATAGGATTTTGTTCTTCCCTTGTAGAACTGAGATTGG
ATTTTAATCAGCTTAAAGCTCTCCCCGAGGCAATGGGAATGCTCGAACACTTGGAGATTC
TTACGCTACACATTAACAGAATCAAAGGATTACCAACAACAATGGGGAATCTTTCTCGCC
TAAGGGAACTTGATGTTAGCTTCAACGAAGTTGAGAACATACCCGAAACATTCTGTTTTG
CTGTCAGCTTGGAAAAGCTTAATCTTGCAAACAACTTTGCGGACTTGAAAACTTTACCAA
GATCAATCGGAAACCTTGAGAATCTTGAAGAGCTTGATATTAGCAACAGTCAAATAAGAA
CGTTGCCCGACTCCTTCAGGCTCTTGTCAAAGTTGAAAACTTTTCGAGCTGATGAGACTC
CGCTAGAAGTACCACCAAGGCAAATTATAAAGCTCGGGGCTCAGGTTGTTGTAGAGTACA
TGGCTGAATTCGTAACTAAGAACGAGCTTCAATTGCAGCGGCCTAAGAGGAGACCTTTCT
TTTGTCCAAGTTGCCTGTTTCCTAAAACCGAGGGGAAGAGGCGGATCTAGAGGAGGTACT
GTTGGTTGAACTGAACCTAATGATTGCGGATCGAACTATTTGTACATCCTGTACAAAACA
TTTGAAAACTTATACAATTAATAAGACCCCCTCATTCTGAATCCGCTGACTCTAGATCTT
GGATTCGTCTCAGCGAGAGGTGTCAGATACCAATTATATAAAAGTTGCTTATAACTGTAA
TGATATGGCTAGCTAGAGTACTGCATTTATCTGACAGTATAACTATTGGTTCTTATAAGA
CTTGAACTGAGTGAAGAAATGTTTCTCATTTCTAATTGTGAAGTACAACTGTCTCCGTGT
GCCGG