Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g006910.3.1
CDS Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT5G23430.3)
Sequence

ATGGCCATCCGTTTTCCTATAGGAGGACTTAAGGGAAGATCTGGAAAGCAACCTGCAGTG
CAGGAGAATATAAACCAGCTGGGACTGCAGTTTTCAAATAAGAGTGGCATAAAGAGGAAA
GCTCCATTGAGTTCTTTGGCATCCGTTTGCATAAAAGCTACCATCTCTGGTGTTGCAAAG
AAAAAGACTATAAGCTGCTATTCCCAAGGAGATGATGATCTGGTCAATGCAAGTAGTTCA
ATCGATGCATCGACGAAAAAATTTGCCACTCCGCAGGAAGAAACCTCTTTTAAAGAGATT
AGTAACCTTGACACAAAAATGAGCAAGCTCCTATGTTGCCACTTCAATTCAAAAGGAGAG
GTGTTGGCTACCGGTGGAGACAATGGGAAGGTTTTGATTTGGGAGTTAGGAAATAACAGA
ACTTGTAGTGTACAAGGTCATGCTCATCAAGTCACAGATGTCTGTTTTAGACCAAACTCA
ACAGCGTTTGCATCATCTTCGTTTGACAGAACTGTGAAGATGTGGGATGCAACAAAGCGA
AACAATCCTTTCCAAAACCTTGTTGGCCATGATGGGCATGTGATGTCTATAGATTTTCAT
CCAACAAAGTTGAGTCTCCTCAGTTCTTGTGATAGCAATGGTGAGATTAGACTGTGGGAT
GTCAAGAGCGGTGATTGCAAGCTGAATTTTAAGGGAGGTATTAGTCAAGTTAGATTTCCA
CCTCAACTTGGGGACTTTTTGGCTAGTTCTACTGGAAATATTATAAATATTTTTGATGTA
GAGACAAACAAGATCCAAAAAAAATTACAAGGACACATCAAAGACATCCATTCAATCTGC
TGGGAGACGAGTGGGAGCTACCTGGCATCTGTGAGTGAAGATAGTGCCCGGATATGGTCT
GTTAGTGATGGGAAGTGTTTATATGAAGTGTACTCTAGCGGAAATAAGTTCCAGTCATGC
ACTTTCCGCTTTGGGCGCCCTCTAGAGTTGGTGATTGGTTCTGATAAGTTCTTGGAGGTG
TGGAATCCATTCTTCCAGAGTAACATAACTAGACCATATATCGCACATTCAGGTACTATT
AATTCATTAGTAGATTCACCTTCGAAAGGAATCGTAGCTTCAGTTAGTGATGATCAATGG
ATCAGGATATGGAAATGA

Peptide Sequence

PEP ID

Solyc08g006910.3.1
PEP Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT5G23430.3)
Sequence

MAIRFPIGGLKGRSGKQPAVQENINQLGLQFSNKSGIKRKAPLSSLASVCIKATISGVAK
KKTISCYSQGDDDLVNASSSIDASTKKFATPQEETSFKEISNLDTKMSKLLCCHFNSKGE
VLATGGDNGKVLIWELGNNRTCSVQGHAHQVTDVCFRPNSTAFASSSFDRTVKMWDATKR
NNPFQNLVGHDGHVMSIDFHPTKLSLLSSCDSNGEIRLWDVKSGDCKLNFKGGISQVRFP
PQLGDFLASSTGNIINIFDVETNKIQKKLQGHIKDIHSICWETSGSYLASVSEDSARIWS
VSDGKCLYEVYSSGNKFQSCTFRFGRPLELVIGSDKFLEVWNPFFQSNITRPYIAHSGTI
NSLVDSPSKGIVASVSDDQWIRIWK*

Transcript Sequence

Transcript ID

Solyc08g006910.3.1
Transcript Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* AT5G23430.3)
Sequence

GTTAAAAATTTGCCCAAAAAGTACTTCTTATTCCCTCAGTTTCCATAATTACCCATCAAA
CAACTGAAACCCTAGAAGTTAACAATGAAAATGAAGGACAAAGGAAAAAGCAAGAAGCAT
TCCGCCATGGATGGAACTGCCAGAAATGTGTATGGGAATACATGTTGCAGATGCCACGAT
ATGCCAATTGATATACCAGAGTCTACACAGAGAGTTTTGCCCTGGCGAATTTGCAGGGAT
ACGTCATTGATATAGGGGATACTTGGATGGTTGTAGATATGCCTTTCGACTCAGAGAAAG
AGATGACAGACCTGACATAGACTTGGGAGGACCTACTATGCTAATGGAACCAAGTATTCA
TGCCCCTGCAAACGCTTTGCCTGCTTCAGTGGAACTTTATGATTCAGATCGATAAATCTG
AAATGACTTAGTATTGCATTTTGCTGCTGTATGATATGTGACGGCTTGGCTGAAGCAGTT
CAAAAGCTCCCATTGTTAGAAGAGTCGAGGCTGTCAGGTAAAGGACAAAGGAAAATAGAA
CAAGAAGGGAAAATTTGGATGAAATCTTTTCAGGTATCACAAACGGTGGAAAACATTGTA
GCTGATAACGGTTTGCATCAATCTTATACTTGTGATCATACAAAAAACATCTCTAATGTC
ATGTCGTCACCTCTTTTGAAGACATCCTCTCATGTGATGGAATCCATTGATCCTGATGTT
ATGGATGTTCATATTCAAAATTTGTTGTCAGCTTATGATACGCATTTTTTGTCACTAGAT
TTGTCTTCTCAGAGAGACATGTTATCAGACTTACAGTGTCCTGAGATGGGTGAAATGAGT
GGCATGCTTCCTTTTGCAAGAAATTCTGGCTATCAAATGACTCCGAAGGGGAATGCAAGA
GGTGACAGACCTGACATAGACTTGGGAGGACCTATGCTAATGGAACCAAGTATTCATGCC
CCTACAAATGCTTTGCCTGCTTCAGTAGAACTGTATGATTCAGGGAACAACGTATCTATC
CAACAAGCATCTCATCAAGGATGGCCATCCGTTTTCCTATAGGAGGACTTAAGGGAAGAT
CTGGAAAGCAACCTGCAGTGCAGGAGAATATAAACCAGCTGGGACTGCAGTTTTCAAATA
AGAGTGGCATAAAGAGGAAAGCTCCATTGAGTTCTTTGGCATCCGTTTGCATAAAAGCTA
CCATCTCTGGTGTTGCAAAGAAAAAGACTATAAGCTGCTATTCCCAAGGAGATGATGATC
TGGTCAATGCAAGTAGTTCAATCGATGCATCGACGAAAAAATTTGCCACTCCGCAGGAAG
AAACCTCTTTTAAAGAGATTAGTAACCTTGACACAAAAATGAGCAAGCTCCTATGTTGCC
ACTTCAATTCAAAAGGAGAGGTGTTGGCTACCGGTGGAGACAATGGGAAGGTTTTGATTT
GGGAGTTAGGAAATAACAGAACTTGTAGTGTACAAGGTCATGCTCATCAAGTCACAGATG
TCTGTTTTAGACCAAACTCAACAGCGTTTGCATCATCTTCGTTTGACAGAACTGTGAAGA
TGTGGGATGCAACAAAGCGAAACAATCCTTTCCAAAACCTTGTTGGCCATGATGGGCATG
TGATGTCTATAGATTTTCATCCAACAAAGTTGAGTCTCCTCAGTTCTTGTGATAGCAATG
GTGAGATTAGACTGTGGGATGTCAAGAGCGGTGATTGCAAGCTGAATTTTAAGGGAGGTA
TTAGTCAAGTTAGATTTCCACCTCAACTTGGGGACTTTTTGGCTAGTTCTACTGGAAATA
TTATAAATATTTTTGATGTAGAGACAAACAAGATCCAAAAAAAATTACAAGGACACATCA
AAGACATCCATTCAATCTGCTGGGAGACGAGTGGGAGCTACCTGGCATCTGTGAGTGAAG
ATAGTGCCCGGATATGGTCTGTTAGTGATGGGAAGTGTTTATATGAAGTGTACTCTAGCG
GAAATAAGTTCCAGTCATGCACTTTCCGCTTTGGGCGCCCTCTAGAGTTGGTGATTGGTT
CTGATAAGTTCTTGGAGGTGTGGAATCCATTCTTCCAGAGTAACATAACTAGACCATATA
TCGCACATTCAGGTACTATTAATTCATTAGTAGATTCACCTTCGAAAGGAATCGTAGCTT
CAGTTAGTGATGATCAATGGATCAGGATATGGAAATGACACTTCTTTGAAGATCAAAAGA
TACAACAACCATTCTTCCTTGTTTCTTTTATCAATGAAACTACAACTGCATACGCCCTTC
CGTATGCATTTTGGACCAAGAAAGGTGATGTTATTCTTGGCACATCACCAGTTGAATTAG
TTTTTTGAAAGGTTGTTTCAGTTACAAACACTAACTATTGTTTCAAACTCCTCTATTTAA
TCTCTTTGAATTTGATTTCTTAAATTGGGAAGTTTGCAATAGTAATATTTTTGTTCTATA
GTACTTGTATGTATTTCCTTGTTACCAACTTAAGTCAATATATTGTACTAGTTGTCTTCA
TATGATACACATTTAGAGGAAATTATAGAATAAGGATAAGTTAGAACATGATTCCCTGGA
TATTTAACTTACTGAAATTAGGATAACCAAAAAAGAATCAACAATGATATCCTTGGAAAA
CAACACTAACATAGTTGCAAGGAGATCTTCAACAAGAGGATGGGGACCTAAAAAGTCCAG
AGCTTCACTAATCATCGGTCATGCTATCAGACAAATCCTCATCCCAACAAGCCTCGAATG
AAAATTCAAGACCCTCGAGAGATTCATGAGGGAGCTTCCCAGAAATTCTACTACTGAAGA
CTTCGTTGGAGGTAACATATTTGCACAGACGCAAGTCTAGAGATACAAGAAGAGGACAAC
TATCAAGAATAGCTTGGAGGCCAATGAGATGAAGGTGGTGCAAGGTAGGTAGGTTTTTAG
CAATAGCTAGAGCTTCTTCATTTCTTTCATCTTCGTTATCAGAGTCATCGACTGATCCCA
TATACAATGACTTGTTAAATTCAAATGACTTCAACCGCGGGCAACAGTGTCCAAGAGCTT
CAATGCCTTGTATTGTGATAGCAGTGTGTATCAAACTCAACTCCTCCAACAATGGGAGCT
TTTGAACTGCTTCAATCAAGCTTTCACATACCTTAAAATAGCAACAGGCAGTACTGAGCC
TCTTCAGTTTTCCTGATCTGGTGTGAACAAAAGTAGAAATGAATCAATGAAAACAAATCA
CCAAACACAATCAGGCTTAGTCCAGAAGACTAGTAAAAGATGTACAAGACCATGGATGGC
ATGAAATACACTTCAGCGTAGCGGAGAAAGAAGATAAAGACAAAGCAACTTGATGCAAAA
ACCTAAACTTGGATACGAGCTCTGTTCAACTTCTCAGTAAATAAGATCAACATTTGAGAA
GTTCATGATGAACCCTTACCTTAAACTTGTATTCTTCAAGAAAAACAAACCCTCTAATCT
CTCTACATTGTTATGAAAGTGAATCATTACTAAGTTTATCAAAATGAGCACCACACAAA