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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g006610.3.1
CDS Infomation

polyphosphatidylinositol phosphatase (AHRD V3.3 *** AT2G45320.1)
Sequence

ATGATAGGAAAGAGAGTGTGCAGTGGATGGCGCCCGTTCCTTCTATGTTTGCCTCTGTTT
TTTGTTTTTGTTCATATAATGTCAGTTTTAGAACTACGGCAGCAGTCTGCTGCAGAAGTT
CCACAAAGGAAACAATACAAGAAGTTTGATCATCTGGTTTTTGGACCTGCTGCAGGCGAA
GGGTTGCCTGATCGGCTACAGTGCAAAGGCAACAAAGCTCTCACCAAGACACATATTGGA
GCATCTTCTAATAATTTGAAGGCTGGAGGCAATATTTCCATTGTCACTGTGTTTGCCACG
TATAATGTTGATCAGCAGACAAATGGCAAATCATTAGACAGTGTTACGGTTGGGAACATT
TCCTACAACAAGGTGGAAAGGTCAATTGCCATCTTGAATGTCTTTGTTAATTTTATTCAG
GAAACCATGCCTCAAAGCAACATCATCATTCTTACTAATCCATCATCTAAACTTCCAGTG
GAAAGAGATAGACTGACCATTCTGCCCATTCAAGGTGATTATTCACGAGAAATGTTGATG
CTACAAAGAATCAGGTCTTACATTGTCTTTCTAGAAACTCGGGCTTCAGAGCATTCAAAA
TTGAAGGGACAAGTGAATCACTACATCTTTACCGACTCAGATATAGCAGTGGTTGATGAT
TTGGGGCAGATATTTAATGATCACCCTGATTTTCATGTGGCTCTAACATTCCGTAACAAC
AAAGAGCAACCTCTGAATTCAGGATTTATAGCAGTGAGGGGCACTCCGGAGGGAATTTTA
AGAGCAAAGTTTTTCTTAGAAGAAGTGCTAAAAGCCTACACGTCAAAGTTCATGAAAGCT
TCCAGAATGCTCGGGGATCAATTAGCTCTTGCTTGGGTAGTAAAATCTCACTCTTCCTTA
GATGTACGAAGGTTTTCTAGGAAACAAGCATTTATGGACCAAATCAGTGGTGCTTCAGTG
CTATTTTTGCCTTGTTCCATTTATAACTGGACACCACCGGAGGGTGCCGGTCAATTTCAT
GGGATGCCCTTGGATGTTAAGGTTGTGCATTTTAAGGGATCAAGAAAGAGACTTATGCTG
GAGTCTTGGAGCTTCTTAAAGTCAACGTCATCTTCAGACATTGCCGACATGTTATGCTTA
ATCTTAAGAAGTGGCAGGACAAAGTACGATTTCTAG

Peptide Sequence

PEP ID

Solyc08g006610.3.1
PEP Infomation

polyphosphatidylinositol phosphatase (AHRD V3.3 *** AT2G45320.1)
Sequence

MIGKRVCSGWRPFLLCLPLFFVFVHIMSVLELRQQSAAEVPQRKQYKKFDHLVFGPAAGE
GLPDRLQCKGNKALTKTHIGASSNNLKAGGNISIVTVFATYNVDQQTNGKSLDSVTVGNI
SYNKVERSIAILNVFVNFIQETMPQSNIIILTNPSSKLPVERDRLTILPIQGDYSREMLM
LQRIRSYIVFLETRASEHSKLKGQVNHYIFTDSDIAVVDDLGQIFNDHPDFHVALTFRNN
KEQPLNSGFIAVRGTPEGILRAKFFLEEVLKAYTSKFMKASRMLGDQLALAWVVKSHSSL
DVRRFSRKQAFMDQISGASVLFLPCSIYNWTPPEGAGQFHGMPLDVKVVHFKGSRKRLML
ESWSFLKSTSSSDIADMLCLILRSGRTKYDF*

Transcript Sequence

Transcript ID

Solyc08g006610.3.1
Transcript Infomation

polyphosphatidylinositol phosphatase (AHRD V3.3 *** AT2G45320.1)
Sequence

GTTTGAACAATTCGATTATCGCATGAATTTTCCCAAAAAAAAAATCCACCAGAGTTCAAT
GGGCTCTACCGGACTCCAAATTTGGACCCAACCCGATCCATTAAGGCCCAATTTTCAAAT
CTCCCCGTAACTTCCTCAATCTCCTTCCCTTCTCCGGCGAAATCTACCCTCTAAATTATT
TTTTCCGGCGAAATCCTCTCAACTAGACGGGCACTATTGCCTCTTCACTGAGTCTCCATC
GGATTCCGGCCTTTGGCTTTTTGAAGCTGGGATAGTATTAGGAATTGGTGTTCCCTACAA
AGATATGATAGGAAAGAGAGTGTGCAGTGGATGGCGCCCGTTCCTTCTATGTTTGCCTCT
GTTTTTTGTTTTTGTTCATATAATGTCAGTTTTAGAACTACGGCAGCAGTCTGCTGCAGA
AGTTCCACAAAGGAAACAATACAAGAAGTTTGATCATCTGGTTTTTGGACCTGCTGCAGG
CGAAGGGTTGCCTGATCGGCTACAGTGCAAAGGCAACAAAGCTCTCACCAAGACACATAT
TGGAGCATCTTCTAATAATTTGAAGGCTGGAGGCAATATTTCCATTGTCACTGTGTTTGC
CACGTATAATGTTGATCAGCAGACAAATGGCAAATCATTAGACAGTGTTACGGTTGGGAA
CATTTCCTACAACAAGGTGGAAAGGTCAATTGCCATCTTGAATGTCTTTGTTAATTTTAT
TCAGGAAACCATGCCTCAAAGCAACATCATCATTCTTACTAATCCATCATCTAAACTTCC
AGTGGAAAGAGATAGACTGACCATTCTGCCCATTCAAGGTGATTATTCACGAGAAATGTT
GATGCTACAAAGAATCAGGTCTTACATTGTCTTTCTAGAAACTCGGGCTTCAGAGCATTC
AAAATTGAAGGGACAAGTGAATCACTACATCTTTACCGACTCAGATATAGCAGTGGTTGA
TGATTTGGGGCAGATATTTAATGATCACCCTGATTTTCATGTGGCTCTAACATTCCGTAA
CAACAAAGAGCAACCTCTGAATTCAGGATTTATAGCAGTGAGGGGCACTCCGGAGGGAAT
TTTAAGAGCAAAGTTTTTCTTAGAAGAAGTGCTAAAAGCCTACACGTCAAAGTTCATGAA
AGCTTCCAGAATGCTCGGGGATCAATTAGCTCTTGCTTGGGTAGTAAAATCTCACTCTTC
CTTAGATGTACGAAGGTTTTCTAGGAAACAAGCATTTATGGACCAAATCAGTGGTGCTTC
AGTGCTATTTTTGCCTTGTTCCATTTATAACTGGACACCACCGGAGGGTGCCGGTCAATT
TCATGGGATGCCCTTGGATGTTAAGGTTGTGCATTTTAAGGGATCAAGAAAGAGACTTAT
GCTGGAGTCTTGGAGCTTCTTAAAGTCAACGTCATCTTCAGACATTGCCGACATGTTATG
CTTAATCTTAAGAAGTGGCAGGACAAAGTACGATTTCTAGTTCAGATTAATTTTGGTCTT
ATCAGAGTTCTTTTTGAGCAAGAATGTGTGCACATTCATTTAGAAGAATGACCAGGCCAT
CTGAGGTTGTTGGTTGTAAGACCAGTCATCGTTCGCGATCCAAATGGAGCTTGAGCTTAA
AACAACAGGTCAATATTGCCCGCTCAGATCAGATGACAGATGGTTTCTAGCTAAAAAGGA
AACAGACACAGCTTGTATTATTAATTTTTGTGTAACTATATGTAAGTTCTTGAAATTGAC
TCCATGTAATCCTTCTTTGTTTTCTAGAAACATCAACAAGATAACTTTTTTGCTGTGTTC
TATAGGAACTTCAACATTGTTTTCTCCTCTTCTGGTATGTAAAATATATCACTAATATGT
GTTATTGAGTTTATACATTTATGAGATTGTTTTTATGGTTTGCTAAAATGAAGCAA