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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g006010.3.1
CDS Infomation

WD repeat domain phosphoinositide-interacting 3 (AHRD V3.3 *** A0A0B0P0U0_GOSAR)
Sequence

ATGGCCACTGTTTCCCCTCTCCCCCCACCAGTTCAGCACCCAAATACTAGTTCGTCACCA
ATGCTTCAAGCTTTCTTAGAGCAACTAGATGAACAACACAAAAAACAGCTTCAGACACAA
GAAGCTGCTGTTGTACAGAAAGATAATGATCCTAAGCAGAGTCACCTTAATCCATGCCCT
ACCCATGGCTTCATCAATAGATCAATTTCAACTCTATACCGTGTTTCCTTCAATCAAAAT
GGTAGTTGTTTTGCCATTGGCACTGATTGCGGCATTAGTGTCTATAGTTGTGATCCTTAC
TGTGAGATGTTTCGACGATACTTTGATAATGGAGGTGGTATTGGAATTGTTGAGATGCTC
TTCAGAAGCAATATACTAGTCTTTGTAGGAAATGGAGATAATCCACAATATCATCGAAAC
AAGGTCATAATTTGGGATGACCATCAGAACCGCTGCATCGGAGAGCTCCGTTTCAGATCG
GCTGTGCGCGGTGTGCGGCTTCGACGGGACTGCATTGTAGTTATACTTGAGCAGAAGATA
TTTATATATAATTTTGCTGATCTGAAGCTCGTCCACCAGATTGAGACAATGTCAAACCCA
AAAGGACTCTGTGAAATTTCACAAACGGCTGTATCACCTGTGCTGGTGTGCCCTGGGTTG
CAAAATGGTCAAGTTCGGGTTGATCAATTCACATCAAAAAGGACTAAGTTTATCTTTGCA
CATGATTCTAGGATTGCATCTTTTGCTCTTAGTCATGAGGGGAATGTGCTGGCAACAGCA
AGTACCAAGGGTACTCTTATCCGGATTTTCAGCACGCAGGATGGTACATTGTTACAGGAG
GTAAGGAGAGGTGCTGATAGAGCAGAAATTCACAGTGTTTCATTCGATCCAGCTGCTCAG
TGGCTAGCAGTCTCTAGTGACAAAGGCACAGTTCATGTTTTTAGGCTCAAGGTCAATCTA
GGGAATCAGGATAAGACAAGAACTACTCCTAATTTCCGTGGTACTTTGGCTGCAGCGAGT
TCACCACTATCCTTCATCAAAGGAGTACTTCCAAAGTATTTTAGCTCAGAATGGTCTGTG
GCTCAATTCAGATTACCCGGAGATTCCGAGTTCATTGTTACTTTTGGTCATGAAAAGAAT
ACATTGTTAATTCTTGGCTTGGATGGAAGCTTTATTAGATGCAAGTTTGATCCTTCCTCT
GGCAAAGAGATGACTCAGATGGAGATTCACAACTTTTTGAAGTCCGAAAAGGCCTTGTGA

Peptide Sequence

PEP ID

Solyc08g006010.3.1
PEP Infomation

WD repeat domain phosphoinositide-interacting 3 (AHRD V3.3 *** A0A0B0P0U0_GOSAR)
Sequence

MATVSPLPPPVQHPNTSSSPMLQAFLEQLDEQHKKQLQTQEAAVVQKDNDPKQSHLNPCP
THGFINRSISTLYRVSFNQNGSCFAIGTDCGISVYSCDPYCEMFRRYFDNGGGIGIVEML
FRSNILVFVGNGDNPQYHRNKVIIWDDHQNRCIGELRFRSAVRGVRLRRDCIVVILEQKI
FIYNFADLKLVHQIETMSNPKGLCEISQTAVSPVLVCPGLQNGQVRVDQFTSKRTKFIFA
HDSRIASFALSHEGNVLATASTKGTLIRIFSTQDGTLLQEVRRGADRAEIHSVSFDPAAQ
WLAVSSDKGTVHVFRLKVNLGNQDKTRTTPNFRGTLAAASSPLSFIKGVLPKYFSSEWSV
AQFRLPGDSEFIVTFGHEKNTLLILGLDGSFIRCKFDPSSGKEMTQMEIHNFLKSEKAL*

Transcript Sequence

Transcript ID

Solyc08g006010.3.1
Transcript Infomation

WD repeat domain phosphoinositide-interacting 3 (AHRD V3.3 *** A0A0B0P0U0_GOSAR)
Sequence

AAATAACACAAACCAATTTCTACTCCAAAAATACAACTGAAAAATTCTCTTGAGTCTTCT
CTTCACTGCGAAGCAAAACCCCAAATCCCTCTTTATTCTTCACTCCTCTTCAATATTGAT
GACAGTCTATGTGGTGTGAGTATCAGATAGAAAACATTATCCATTTAGCTTTATACCTCT
CTAAGATTTTTTCCTAATCCGTCCATGGCCACTGTTTCCCCTCTCCCCCCACCAGTTCAG
CACCCAAATACTAGTTCGTCACCAATGCTTCAAGCTTTCTTAGAGCAACTAGATGAACAA
CACAAAAAACAGCTTCAGACACAAGAAGCTGCTGTTGTACAGAAAGATAATGATCCTAAG
CAGAGTCACCTTAATCCATGCCCTACCCATGGCTTCATCAATAGATCAATTTCAACTCTA
TACCGTGTTTCCTTCAATCAAAATGGTAGTTGTTTTGCCATTGGCACTGATTGCGGCATT
AGTGTCTATAGTTGTGATCCTTACTGTGAGATGTTTCGACGATACTTTGATAATGGAGGT
GGTATTGGAATTGTTGAGATGCTCTTCAGAAGCAATATACTAGTCTTTGTAGGAAATGGA
GATAATCCACAATATCATCGAAACAAGGTCATAATTTGGGATGACCATCAGAACCGCTGC
ATCGGAGAGCTCCGTTTCAGATCGGCTGTGCGCGGTGTGCGGCTTCGACGGGACTGCATT
GTAGTTATACTTGAGCAGAAGATATTTATATATAATTTTGCTGATCTGAAGCTCGTCCAC
CAGATTGAGACAATGTCAAACCCAAAAGGACTCTGTGAAATTTCACAAACGGCTGTATCA
CCTGTGCTGGTGTGCCCTGGGTTGCAAAATGGTCAAGTTCGGGTTGATCAATTCACATCA
AAAAGGACTAAGTTTATCTTTGCACATGATTCTAGGATTGCATCTTTTGCTCTTAGTCAT
GAGGGGAATGTGCTGGCAACAGCAAGTACCAAGGGTACTCTTATCCGGATTTTCAGCACG
CAGGATGGTACATTGTTACAGGAGGTAAGGAGAGGTGCTGATAGAGCAGAAATTCACAGT
GTTTCATTCGATCCAGCTGCTCAGTGGCTAGCAGTCTCTAGTGACAAAGGCACAGTTCAT
GTTTTTAGGCTCAAGGTCAATCTAGGGAATCAGGATAAGACAAGAACTACTCCTAATTTC
CGTGGTACTTTGGCTGCAGCGAGTTCACCACTATCCTTCATCAAAGGAGTACTTCCAAAG
TATTTTAGCTCAGAATGGTCTGTGGCTCAATTCAGATTACCCGGAGATTCCGAGTTCATT
GTTACTTTTGGTCATGAAAAGAATACATTGTTAATTCTTGGCTTGGATGGAAGCTTTATT
AGATGCAAGTTTGATCCTTCCTCTGGCAAAGAGATGACTCAGATGGAGATTCACAACTTT
TTGAAGTCCGAAAAGGCCTTGTGATGGAAACATTGGATCGGCTTTCTTGTCCATGCAAGG
AGGTATTTGCTTCCCTTAGTTGCACATGCTTTCATAGTCGTGGTATACGTTATTGTAACT
ATCATATATATAGTGATTTAACAGGGTAATCGGTAGCTATAGCCAACAATTTTGAACAAG
TTATGATGTACAGAACATCGACGTATTAGTATTCTAACAAAAATATAAGATATACAGTTG
AATTCAGAATCACAATTGTTACCAGGAAGAAAATGTTTAGTTTTCTTCTTTGTTGCTCAA
CTTTGCTTCATTTCTACTATGGGTAGAGATATTTGATAATTTCTCGACTTT