Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g005980.3.1

CDS Infomation

high-affinity nickel-transport family protein (AHRD V3.3 *** AT2G16800.1)

Sequence

ATGGAGAAACTCATCTATTCAACAACCCAATGTCCCTCTAAACTCCATCACCAAAATCGT
TCTCATCCTCTTCTTCCCACTAGAATTCGTCATGTAGATTTTAAGCTCCCTTCACTGTTA
CGTCTTGAGTCGCGTCGAGTCAACTCGTTATCCATCAAGTGCTCCCATGATTCTTCTTCA
TCATTTTCCGGAACCCAGAATGGGTATGAGGAAAACCCATTTGTATTTCCGGGTTCTGCA
TATGGATCCGGGTCGAAGACCCATTTTCTCAAGCTGATTGGTGAAAGGATATCTCAGCAA
AACAAGGCCCTTTCTGCAAGTACCATAGTTCTTCTGTCGGCCGTGTTTGTTATGCTCATC
CATCCGGTCATTGTTTCACCAGCTTTTGCTAGTTTCCAAGCGGCAGCTAAGGCTGGTGGG
CCGGCTGCAGCAGCACTGACAAGTCGATTTGTTCGTAATGAATTACTAAGCAGTGCATGG
ACTGGTTTCTTTGCTGGTTGCCTACACACCCTATCGGGTCCTGACCATCTTGCTGCTTTG
GCTCCTTTGTCAATAGGCCGCACAAGGATGGAGAGTGCGGCAGTGGGAGCCCTCTGGGGT
TGTGGTCATGATGCTGGGCAGTTGATTTTTGGCCTGTTGTTTCTGCTCTTAAAGGACAGA
CTCCACATTGAAGTTATTCGTACATGGGGAACAAGAGTAGTAGGCTTCACCCTTCTTGTT
ATCGGAGCCATGGGAATTAAAGAAGCATCTGAAGTTAATTCCCAGTTTGTTCCCCTGGAA
AATGGTGATAGTGATGTTAGTGTCTACGAAGACATTAACACTCCAGTTATCGGGAAGAAG
AAGAAGAAAGTGGGGTTCGCAACCTTTGCAACTGGCATTGTCCACGGGCTACAACCTGAC
GCGTTGCTCATAATCCTTCCAGCTCTTGCTTTGCCTTCGCGGTTGGCTGGTGCTGCCTTC
TTGGGTATGTTCTTGGTTGGAACAGTTATGGCAATGGGTAGCTATACTGTGTTTATAGGC
TCATGTAGTCAGGCACTGAAAGATAGAGTTCCTAGAATTACTGAAAAACTCACTTGGGCT
TCTTCCCTTATTGCAATTGGTTTAGGCCTTGCTATAATCATCAGCCAATTTTTTGGTTTT
AGCCTATACTAA

Peptide Sequence

PEP ID

Solyc08g005980.3.1

PEP Infomation

high-affinity nickel-transport family protein (AHRD V3.3 *** AT2G16800.1)

Sequence

MEKLIYSTTQCPSKLHHQNRSHPLLPTRIRHVDFKLPSLLRLESRRVNSLSIKCSHDSSS
SFSGTQNGYEENPFVFPGSAYGSGSKTHFLKLIGERISQQNKALSASTIVLLSAVFVMLI
HPVIVSPAFASFQAAAKAGGPAAAALTSRFVRNELLSSAWTGFFAGCLHTLSGPDHLAAL
APLSIGRTRMESAAVGALWGCGHDAGQLIFGLLFLLLKDRLHIEVIRTWGTRVVGFTLLV
IGAMGIKEASEVNSQFVPLENGDSDVSVYEDINTPVIGKKKKKVGFATFATGIVHGLQPD
ALLIILPALALPSRLAGAAFLGMFLVGTVMAMGSYTVFIGSCSQALKDRVPRITEKLTWA
SSLIAIGLGLAIIISQFFGFSLY*

Transcript Sequence

Transcript ID

Solyc08g005980.3.1

Transcript Infomation

high-affinity nickel-transport family protein (AHRD V3.3 *** AT2G16800.1)

Sequence

CTGCTCTCCAAGTGTAAAAATTTATACATATATATACCCAAAGTGTTAACATCTTCTTTT
AAATCCCTTTGTTATAAACATGCTCTCTTTCAGCCTAACTTGTCTCACCGGCTTTCTTTC
ATATCACATACAGGAAAAGAGCAAGTAATAGAGAAAAGAATGAAAAGTAACAGCAGAATG
TGCTTCTTGCTTGTTGCCCTTCATCTTCTTAATCTACTGACGCAAAGTCAAAGTCTAAGA
TCAGATTTGACAAAAGCTGATATAAACCAGATTCCATCTTCACACCCCCGGTACATTGTC
ATGTCAAATCAACACATTGCTTTTGATAAAACTTCTAACATTGTTTAAGGCAGCTAAAAA
GAGTCTGATGGAGAGAAATAAGCACATTTCTTACACCCCTAAGACACTTTGGCATAAAAA
GGGAAGTTGTTATTAGAAAAATATCCAATACTAGTTTGCATGTTGATACGCTTCCACGTG
AATGAAGCACACTTTTGTATGTTGGATAAGTACAAAGGTGAAAGACAACTATTGACTAGG
GGATCAAGTGGGTGGCAACCCTGTATACAGTAGGAACGCAAGACACAGCCACAGAAGCAT
TTATAGAAACTAAACAGCAAGAAACTATACAAATCTGGAGACAATAAAAATAATGAGAGA
AGAAAATGGAGAAGATAATACAGAGTAAAATTGGCCAAAATTGTGTAGTTCAAAGCCGCC
ATTGTTATGGAGAAACTCATCTATTCAACAACCCAATGTCCCTCTAAACTCCATCACCAA
AATCGTTCTCATCCTCTTCTTCCCACTAGAATTCGTCATGTAGATTTTAAGCTCCCTTCA
CTGTTACGTCTTGAGTCGCGTCGAGTCAACTCGTTATCCATCAAGTGCTCCCATGATTCT
TCTTCATCATTTTCCGGAACCCAGAATGGGTATGAGGAAAACCCATTTGTATTTCCGGGT
TCTGCATATGGATCCGGGTCGAAGACCCATTTTCTCAAGCTGATTGGTGAAAGGATATCT
CAGCAAAACAAGGCCCTTTCTGCAAGTACCATAGTTCTTCTGTCGGCCGTGTTTGTTATG
CTCATCCATCCGGTCATTGTTTCACCAGCTTTTGCTAGTTTCCAAGCGGCAGCTAAGGCT
GGTGGGCCGGCTGCAGCAGCACTGACAAGTCGATTTGTTCGTAATGAATTACTAAGCAGT
GCATGGACTGGTTTCTTTGCTGGTTGCCTACACACCCTATCGGGTCCTGACCATCTTGCT
GCTTTGGCTCCTTTGTCAATAGGCCGCACAAGGATGGAGAGTGCGGCAGTGGGAGCCCTC
TGGGGTTGTGGTCATGATGCTGGGCAGTTGATTTTTGGCCTGTTGTTTCTGCTCTTAAAG
GACAGACTCCACATTGAAGTTATTCGTACATGGGGAACAAGAGTAGTAGGCTTCACCCTT
CTTGTTATCGGAGCCATGGGAATTAAAGAAGCATCTGAAGTTAATTCCCAGTTTGTTCCC
CTGGAAAATGGTGATAGTGATGTTAGTGTCTACGAAGACATTAACACTCCAGTTATCGGG
AAGAAGAAGAAGAAAGTGGGGTTCGCAACCTTTGCAACTGGCATTGTCCACGGGCTACAA
CCTGACGCGTTGCTCATAATCCTTCCAGCTCTTGCTTTGCCTTCGCGGTTGGCTGGTGCT
GCCTTCTTGGGTATGTTCTTGGTTGGAACAGTTATGGCAATGGGTAGCTATACTGTGTTT
ATAGGCTCATGTAGTCAGGCACTGAAAGATAGAGTTCCTAGAATTACTGAAAAACTCACT
TGGGCTTCTTCCCTTATTGCAATTGGTTTAGGCCTTGCTATAATCATCAGCCAATTTTTT
GGTTTTAGCCTATACTAATCGCGTTTCATTAATTTTTCTTCAATATTAGGCAATGTATTT
ATTTTTTGTGAGATTGTATTTTTTGATTGAAGATTCATATTGTAGCATTATTAATAGTTG
TTCATTTGTTTAAAATCTTCATTCTCTTCTTTTCTAACTCATGTTTCTCCGCTTCTCAAT
TTGTTTGTCCTATTTTGAGGAAGAGTGTAAATGAGAGTCTTTGCCCTGGTCTCCCAATCA
AGGATGTTTTTGTAATTTGACTAAAAT