Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g005860.3.1
CDS Infomation

putrescine-binding periplasmic protein-like protein (AHRD V3.3 *** AT1G31410.1)
Sequence

ATGTCTTTGCTTTCACCTCCTCTCCCAATCCCAATTCTCCATAGCTCTACACACCATTTT
TGTACTCTTCGTCTTGTTAATCTTCAAAAGTCTCCATCTTTACACTTCCACAGAAGCTAT
AAGCTCTATATCGGAGCTTCTGCAGTTCCCCTTCACCGGAACTCGGCGAATTTTTCGGCG
TCCGGTGAAGTTCTTTGTCGAATTGCTGCTTCTGCTGTTCTTTTTCTTAGTTTGGGTTCG
ACCCTTTTCGCCTTTAGGGCTGTTGCTTCAACCCATGTTCCTCCTTCAGACCCTTGTGTA
ACTCAGCTTCAGGAACAAGAATCTCAAGGCACTGGAGTTGGAAAATCAGAAAATGGGGAG
GATATCGATAATGAAGAACTTCAAGCAGCATTTGAGAAATGGAAGTCTAAGACATATGCT
TTGACTGTTCCTTTAAGAGTTGTTTCTCTTAGTAACTCCTTTCCTCCTGTATGGCTCAAG
GATTTTTTGCGATCCCAAGGGAAGAGAGTGAAATTACGTTCTGAGTTTCGTCAAAGCCTG
CAAGACATCTTTAATGAACTTTGTATACCTTTACAGAAAGGAAAAATTAATCCTAAATCT
GCTCTGGCAGCTGATGTCGTCACTCTTGGTGATACGTGGCTCAGTCATGCCATTGAGAAG
AGATTAATTGAGCCGATGGACGGTTTAGAAGATCAAGATTGGTTTGAGAATTTGAATGAG
AAATGGAAGGTATATTTGCGCAGGAGTGATGAAGGGAAACTGGATGCTAGTGGTAGGATA
TGGGCAGCTCCATATAGATGGGGAAGCATAGTTATAGCTTACAAGAAAAGTGAATTTCAA
AAGCGTAAAATCGCTCCTATAGAGGACTGGGCCGATCTATGGCGACCTGAGCTTGCTGGA
AAGATTGCAATGGTAGATTCACCTCGAGAGATTGTGGGTGCAGTGTTAAAGTACATGGGA
GCATCATACAACACAATAGACATGTCTGAAGTTGCTGGTGGGAAAGAGGCCGTGCAGCAG
AATCTTGCATCACTTGTTAAACAGGTCCGGCTATTTGATAGTCGCCACTATCTTAAAGCC
TTCGGAGTTGGGGATGTATGGGTAGCTGTTGGATGGAGCAATGATGTCATTCCTGCTGCG
AAGCGCTTGTCAAATATTGCTGTTATTGTTCCCAAATCTGGTGCAAGTTTGTGGGCTGAT
TTCTGGGCAATACCTGCTGCTTCAAGAATTGCAACTGATGAAATCGGTGGAAGAGTTAGA
GGACCATCACCAGTAGTGCATCAGTGGATAGAATTCTGCTTGCAAGCTGAAAGATTCAAA
GACGACGTTGTCCCAGGTACTTCACCTAACACCCTCGGATCCTCAGTTAAAGTCTCCGAA
AAGCTTACTAGGGGTAGACCAAAACTTGAGACAAACCTCATTGCTGGAGTCCCTCCATCT
GATATCTTGGCTAAATGTGAACTGATAGAGCCATTACCAGAAAAGACACTCTCCGAGTAT
CGATGGCTGATAAATAGTGTACAGAAGCCAGAGAGTTCTCTGGCGGATAGATTAATGAAT
CGTATCTCGTCACTAGCTCATAGCCTTCTTTGTAAAGTACAGTAA

Peptide Sequence

PEP ID

Solyc08g005860.3.1
PEP Infomation

putrescine-binding periplasmic protein-like protein (AHRD V3.3 *** AT1G31410.1)
Sequence

MSLLSPPLPIPILHSSTHHFCTLRLVNLQKSPSLHFHRSYKLYIGASAVPLHRNSANFSA
SGEVLCRIAASAVLFLSLGSTLFAFRAVASTHVPPSDPCVTQLQEQESQGTGVGKSENGE
DIDNEELQAAFEKWKSKTYALTVPLRVVSLSNSFPPVWLKDFLRSQGKRVKLRSEFRQSL
QDIFNELCIPLQKGKINPKSALAADVVTLGDTWLSHAIEKRLIEPMDGLEDQDWFENLNE
KWKVYLRRSDEGKLDASGRIWAAPYRWGSIVIAYKKSEFQKRKIAPIEDWADLWRPELAG
KIAMVDSPREIVGAVLKYMGASYNTIDMSEVAGGKEAVQQNLASLVKQVRLFDSRHYLKA
FGVGDVWVAVGWSNDVIPAAKRLSNIAVIVPKSGASLWADFWAIPAASRIATDEIGGRVR
GPSPVVHQWIEFCLQAERFKDDVVPGTSPNTLGSSVKVSEKLTRGRPKLETNLIAGVPPS
DILAKCELIEPLPEKTLSEYRWLINSVQKPESSLADRLMNRISSLAHSLLCKVQ*

Transcript Sequence

Transcript ID

Solyc08g005860.3.1
Transcript Infomation

putrescine-binding periplasmic protein-like protein (AHRD V3.3 *** AT1G31410.1)
Sequence

ATTTATTAAAAAAAATAATTATATATTTTAGATAAAAAAAAATTTAAAAATATATTTTCC
AACACTTAACAAAAGAGTGATACAATTTCTAATCAATTTGCATAGAGACAATGTCTTTGC
TTTCACCTCCTCTCCCAATCCCAATTCTCCATAGCTCTACACACCATTTTTGTACTCTTC
GTCTTGTTAATCTTCAAAAGTCTCCATCTTTACACTTCCACAGAAGCTATAAGCTCTATA
TCGGAGCTTCTGCAGTTCCCCTTCACCGGAACTCGGCGAATTTTTCGGCGTCCGGTGAAG
TTCTTTGTCGAATTGCTGCTTCTGCTGTTCTTTTTCTTAGTTTGGGTTCGACCCTTTTCG
CCTTTAGGGCTGTTGCTTCAACCCATGTTCCTCCTTCAGACCCTTGTGTAACTCAGCTTC
AGGAACAAGAATCTCAAGGCACTGGAGTTGGAAAATCAGAAAATGGGGAGGATATCGATA
ATGAAGAACTTCAAGCAGCATTTGAGAAATGGAAGTCTAAGACATATGCTTTGACTGTTC
CTTTAAGAGTTGTTTCTCTTAGTAACTCCTTTCCTCCTGTATGGCTCAAGGATTTTTTGC
GATCCCAAGGGAAGAGAGTGAAATTACGTTCTGAGTTTCGTCAAAGCCTGCAAGACATCT
TTAATGAACTTTGTATACCTTTACAGAAAGGAAAAATTAATCCTAAATCTGCTCTGGCAG
CTGATGTCGTCACTCTTGGTGATACGTGGCTCAGTCATGCCATTGAGAAGAGATTAATTG
AGCCGATGGACGGTTTAGAAGATCAAGATTGGTTTGAGAATTTGAATGAGAAATGGAAGG
TATATTTGCGCAGGAGTGATGAAGGGAAACTGGATGCTAGTGGTAGGATATGGGCAGCTC
CATATAGATGGGGAAGCATAGTTATAGCTTACAAGAAAAGTGAATTTCAAAAGCGTAAAA
TCGCTCCTATAGAGGACTGGGCCGATCTATGGCGACCTGAGCTTGCTGGAAAGATTGCAA
TGGTAGATTCACCTCGAGAGATTGTGGGTGCAGTGTTAAAGTACATGGGAGCATCATACA
ACACAATAGACATGTCTGAAGTTGCTGGTGGGAAAGAGGCCGTGCAGCAGAATCTTGCAT
CACTTGTTAAACAGGTCCGGCTATTTGATAGTCGCCACTATCTTAAAGCCTTCGGAGTTG
GGGATGTATGGGTAGCTGTTGGATGGAGCAATGATGTCATTCCTGCTGCGAAGCGCTTGT
CAAATATTGCTGTTATTGTTCCCAAATCTGGTGCAAGTTTGTGGGCTGATTTCTGGGCAA
TACCTGCTGCTTCAAGAATTGCAACTGATGAAATCGGTGGAAGAGTTAGAGGACCATCAC
CAGTAGTGCATCAGTGGATAGAATTCTGCTTGCAAGCTGAAAGATTCAAAGACGACGTTG
TCCCAGGTACTTCACCTAACACCCTCGGATCCTCAGTTAAAGTCTCCGAAAAGCTTACTA
GGGGTAGACCAAAACTTGAGACAAACCTCATTGCTGGAGTCCCTCCATCTGATATCTTGG
CTAAATGTGAACTGATAGAGCCATTACCAGAAAAGACACTCTCCGAGTATCGATGGCTGA
TAAATAGTGTACAGAAGCCAGAGAGTTCTCTGGCGGATAGATTAATGAATCGTATCTCGT
CACTAGCTCATAGCCTTCTTTGTAAAGTACAGTAAACCTTAGTTGC