Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g005680.3.1
CDS Infomation	Z,Z-farnesyl pyrophosphate synthase
Sequence	ATGAGTTCTTTGGTTCTTCAATGTTGGAAATTATCATCTCCATCTCTGATTTTACAACAA AATACATCAATATCCATGGGTGCATTCAAAGGTATTCATAAACTTCAAATCCCAAATTCG CCTCTGACAGTGTCTGCTCGTGGACTCAACAAGATTTCATGCTCACTCAACTTACAAACC GAAAAGCTTTGTTATGAGGATAATGATAATGATCTTGATGAAGAACTTATGCCTAAACAC ATTGCTTTGATAATGGATGGTAATAGGAGATGGGCAAAGGATAAGGGTTTAGAAGTATAT GAAGGTCACAAACATATTATTCCAAAATTAAAAGAGATTTGTGACATTTCTTCTAAATTG GGAATACAAATTATCACTGCTTTTGCATTCTCTACTGAAAATTGGAAACGATCCAAGGAG GAGGTTGATTTCTTGTTGCAAATGTTCGAAGAAATCTATGATGAGTTTTCGAGGTCTGGA GTAAGAGTGTCTATTATAGGTTGTAAATCCGACCTCCCAATGACATTACAAAAATGCATA GCATTAACAGAAGAGACTACAAAGGGCAACAAAGGACTTCACCTTGTGATTGCACTAAAC TATGGTGGATATTATGACATATTGCAAGCAACAAAAAGCATTGTTAATAAAGCAATGAAT GGTTTATTAGATGTAGAAGATATCAACAAGAATTTATTTGATCAAGAACTTGAAAGCAAG TGTCCAAATCCTGATTTACTTATAAGGACAGGAGGTGAACAAAGAGTTAGTAACTTTTTG TTGTGGCAATTGGCTTACACTGAATTTTACTTCACCAACACATTGTTTCCTGATTTTGGA GAGGAAGATCTTAAAGAGGCAATAATGAACTTTCAACAAAGGCATAGACGTTTTGGTGGA CACACATATTGA

Peptide Sequence

PEP ID	Solyc08g005680.3.1
PEP Infomation	Z,Z-farnesyl pyrophosphate synthase
Sequence	MSSLVLQCWKLSSPSLILQQNTSISMGAFKGIHKLQIPNSPLTVSARGLNKISCSLNLQT EKLCYEDNDNDLDEELMPKHIALIMDGNRRWAKDKGLEVYEGHKHIIPKLKEICDISSKL GIQIITAFAFSTENWKRSKEEVDFLLQMFEEIYDEFSRSGVRVSIIGCKSDLPMTLQKCI ALTEETTKGNKGLHLVIALNYGGYYDILQATKSIVNKAMNGLLDVEDINKNLFDQELESK CPNPDLLIRTGGEQRVSNFLLWQLAYTEFYFTNTLFPDFGEEDLKEAIMNFQQRHRRFGG HTY*

Transcript Sequence

Transcript ID	Solyc08g005680.3.1
Transcript Infomation	Z,Z-farnesyl pyrophosphate synthase
Sequence	ACCCTATATAGAACTATTGATCAATATAGAACTATTGATCTATTGATCAAAAGAGTCATA CCATAATTCTATTTAAACACCACCTCCCTTGTTTCACTTCACAATAAAATAAATTTGAGT AATAAAGCATGAGTTCTTTGGTTCTTCAATGTTGGAAATTATCATCTCCATCTCTGATTT TACAACAAAATACATCAATATCCATGGGTGCATTCAAAGGTATTCATAAACTTCAAATCC CAAATTCGCCTCTGACAGTGTCTGCTCGTGGACTCAACAAGATTTCATGCTCACTCAACT TACAAACCGAAAAGCTTTGTTATGAGGATAATGATAATGATCTTGATGAAGAACTTATGC CTAAACACATTGCTTTGATAATGGATGGTAATAGGAGATGGGCAAAGGATAAGGGTTTAG AAGTATATGAAGGTCACAAACATATTATTCCAAAATTAAAAGAGATTTGTGACATTTCTT CTAAATTGGGAATACAAATTATCACTGCTTTTGCATTCTCTACTGAAAATTGGAAACGAT CCAAGGAGGAGGTTGATTTCTTGTTGCAAATGTTCGAAGAAATCTATGATGAGTTTTCGA GGTCTGGAGTAAGAGTGTCTATTATAGGTTGTAAATCCGACCTCCCAATGACATTACAAA AATGCATAGCATTAACAGAAGAGACTACAAAGGGCAACAAAGGACTTCACCTTGTGATTG CACTAAACTATGGTGGATATTATGACATATTGCAAGCAACAAAAAGCATTGTTAATAAAG CAATGAATGGTTTATTAGATGTAGAAGATATCAACAAGAATTTATTTGATCAAGAACTTG AAAGCAAGTGTCCAAATCCTGATTTACTTATAAGGACAGGAGGTGAACAAAGAGTTAGTA ACTTTTTGTTGTGGCAATTGGCTTACACTGAATTTTACTTCACCAACACATTGTTTCCTG ATTTTGGAGAGGAAGATCTTAAAGAGGCAATAATGAACTTTCAACAAAGGCATAGACGTT TTGGTGGACACACATATTGAGGAACAAAAAGAAGTTTCTAGTATCTCTTGTTTAATGTGT TTTTTTTTCTTTCTAAAAAAATAATGTTATGTCGATTTGTTAAATCATACGAGCATC