Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g005400.3.1
CDS Infomation

Cytosine-specific methyltransferase (AHRD V3.3 *-* A0A061G618_THECC)
Sequence

ATGGCGAAAAAGCAAAATGATTCTTCAAGATTTTCAACAAATCTTACTCCATCTCCCCAA
AAAGACAAACCCATTTCATCTTCATCAGAATTAGCTCTGTTTTACCCTCAAAATGAAGAA
CCAGTTCCATTGATAGTGTTTTATCCATCATCAGTCAGGAGAAGATCTTCTAGATTCACT
ACCAACAAATTCAGTACTAGTGCTACTGAATTCATGACGAAAAATCGGGACACCATTTCC
CCTGAAAAAACTGTTTTTCTTCTTCCATCACCACCTACATTGGCCGGAAAAAAAACTCCG
GCGGAAGTTACGAGGAGGTCGCCGAGATTGGTATCACTGTCAGCTAGGACAACGACGGCG
AAGGAGAAGGGCAAAAAAGTAAATTCAAGGAAATCGGAGGGTGGAATAAAACAAGTGGAA
CTATCGAGGAAGCGGAAACCGGCAAGTTGTAAAATGGATGAAGAAACCCGAAAATCTCCG
AGGTTCAATTCCGATTCCTCAAATGGAGTTCAACTAGCACTGCCGGAGATGAGCGCGTGC
GGTGCACTCTCCGCCGGCGGAAGAACCGGCACGAAGAGGGAACTGCTGGCTCTGATGACG
ACGACGCCGGCGAACAGCAGCGCGTCGAGGAAACGCGCTGCCAGGGGGAGTGATTCAGTA
AATGTAGGGAACAATTCACGAGGATCCCGGAGGAAAGATCCAGTTTTTGCTGAATCGCCG
GGAACATCGGTAAAAATAACGGCTGAGAGCAATTCAGCGGGAGAGAAGAATTTAAGATCG
AGAAAAGCACAAGGGAGTGTTAATTATAATGAGAGTAAAGGATCGGAAACGAAACGGATA
AAAAGTTCAGCAGAGAAAAGTGTGAGGAAGCAGAAGAGTAATGCATGTTTTATCGGTGAG
CCGATAGATACAGAGGAAGCTCAACAGCAATGGCAATGGCGATACGAATTGAAGAATCGA
AAAACGCAGCGCCAAGGGTGGAAATTAAATTCCGGCGAAGAAGATGAAATCATATTAAAT
GTGGAATGCCATTATGCTCAAGCTAAGGTTGCTGGTTTCATTTTCAATATTGGAGATTGT
GCATTTGTAAAGGGTGAAGGCAAGAAAAAACATATTGGCAGGATCTTGGAGTTTTTCAAG
ACGACAGAGGGGGAAGATTATTTTAGGGTACAATGGTTCTTCAGAGCTGAAGATACGGTG
TTGCAAGGTGCGGCTTCTTTCCATGACCCAAAGCGCGTATTCTATTCTACTTTGGAGAAT
GATAATTTACTAGACTGCATAGTTTCCAAAGTTAACGTGGTAGAATTACCAACCAGGCAT
GATTTGAATAAAAAGGATGTTCCACCTGCTCACTTTTATTACGACATGGAATACTGTGTT
GATTATTCCACATTCCGTACGTTGCATAATGTCAAAAGCTCTGTCTCCCCTTCGCTAGTT
GATGTGTCATATAAGCCTATCACTACATATCCTCTGGAGGTATCACCAAGTTGTGAACCT
ATGAAAGTGGAGTTGTCATTATTGGATCTATATGCTGGTTGTGGCGGCATGTCAATGGGA
TTGTGCCTTGGCACAAAACTCTCTGGTCTTAATCTTGTGACGAAATGGGCAGTTGATTTT
AATAAAGCTGCCTGTGATAGCCTGAAACTGAATCATCCTCAGACACATGTTAGGAATGAA
GGTGTTGAGAATTTTCTAGAGCTACTGAAAAGATGGGAGAAGCTAATTAAGTCGTACGGC
TGTAGTGATATCAAAACAAGCTCTAATATTGAGCTAGACGACAGAGATGAAGGCGAAAAC
AATGATGATTCTCAGTCTGGTTCCAATGCATCTTCTGGAGAATATGAGGTATTAAGATTC
GTTGACATATGTTACGGGGATCCCAACAATGACGGAAAATCTGGACTTCATTTTAAGGTA
GAAGCTTTTCTTTCATATTATGTTGGTTGTCCTAGTTTAATGCACTTATAG

Peptide Sequence

PEP ID

Solyc08g005400.3.1
PEP Infomation

Cytosine-specific methyltransferase (AHRD V3.3 *-* A0A061G618_THECC)
Sequence

MAKKQNDSSRFSTNLTPSPQKDKPISSSSELALFYPQNEEPVPLIVFYPSSVRRRSSRFT
TNKFSTSATEFMTKNRDTISPEKTVFLLPSPPTLAGKKTPAEVTRRSPRLVSLSARTTTA
KEKGKKVNSRKSEGGIKQVELSRKRKPASCKMDEETRKSPRFNSDSSNGVQLALPEMSAC
GALSAGGRTGTKRELLALMTTTPANSSASRKRAARGSDSVNVGNNSRGSRRKDPVFAESP
GTSVKITAESNSAGEKNLRSRKAQGSVNYNESKGSETKRIKSSAEKSVRKQKSNACFIGE
PIDTEEAQQQWQWRYELKNRKTQRQGWKLNSGEEDEIILNVECHYAQAKVAGFIFNIGDC
AFVKGEGKKKHIGRILEFFKTTEGEDYFRVQWFFRAEDTVLQGAASFHDPKRVFYSTLEN
DNLLDCIVSKVNVVELPTRHDLNKKDVPPAHFYYDMEYCVDYSTFRTLHNVKSSVSPSLV
DVSYKPITTYPLEVSPSCEPMKVELSLLDLYAGCGGMSMGLCLGTKLSGLNLVTKWAVDF
NKAACDSLKLNHPQTHVRNEGVENFLELLKRWEKLIKSYGCSDIKTSSNIELDDRDEGEN
NDDSQSGSNASSGEYEVLRFVDICYGDPNNDGKSGLHFKVEAFLSYYVGCPSLMHL*

Transcript Sequence

Transcript ID

Solyc08g005400.3.1
Transcript Infomation

Cytosine-specific methyltransferase (AHRD V3.3 *-* A0A061G618_THECC)
Sequence

TATTTAGATTATACTATTTTGACCAATCCTCTTCCCCTGTTTTCTTCTGTAAAGACACCA
CCTATTCTTGGCAATTTCCAAATAAAAATGGCGAAAAAGCAAAATGATTCTTCAAGATTT
TCAACAAATCTTACTCCATCTCCCCAAAAAGACAAACCCATTTCATCTTCATCAGAATTA
GCTCTGTTTTACCCTCAAAATGAAGAACCAGTTCCATTGATAGTGTTTTATCCATCATCA
GTCAGGAGAAGATCTTCTAGATTCACTACCAACAAATTCAGTACTAGTGCTACTGAATTC
ATGACGAAAAATCGGGACACCATTTCCCCTGAAAAAACTGTTTTTCTTCTTCCATCACCA
CCTACATTGGCCGGAAAAAAAACTCCGGCGGAAGTTACGAGGAGGTCGCCGAGATTGGTA
TCACTGTCAGCTAGGACAACGACGGCGAAGGAGAAGGGCAAAAAAGTAAATTCAAGGAAA
TCGGAGGGTGGAATAAAACAAGTGGAACTATCGAGGAAGCGGAAACCGGCAAGTTGTAAA
ATGGATGAAGAAACCCGAAAATCTCCGAGGTTCAATTCCGATTCCTCAAATGGAGTTCAA
CTAGCACTGCCGGAGATGAGCGCGTGCGGTGCACTCTCCGCCGGCGGAAGAACCGGCACG
AAGAGGGAACTGCTGGCTCTGATGACGACGACGCCGGCGAACAGCAGCGCGTCGAGGAAA
CGCGCTGCCAGGGGGAGTGATTCAGTAAATGTAGGGAACAATTCACGAGGATCCCGGAGG
AAAGATCCAGTTTTTGCTGAATCGCCGGGAACATCGGTAAAAATAACGGCTGAGAGCAAT
TCAGCGGGAGAGAAGAATTTAAGATCGAGAAAAGCACAAGGGAGTGTTAATTATAATGAG
AGTAAAGGATCGGAAACGAAACGGATAAAAAGTTCAGCAGAGAAAAGTGTGAGGAAGCAG
AAGAGTAATGCATGTTTTATCGGTGAGCCGATAGATACAGAGGAAGCTCAACAGCAATGG
CAATGGCGATACGAATTGAAGAATCGAAAAACGCAGCGCCAAGGGTGGAAATTAAATTCC
GGCGAAGAAGATGAAATCATATTAAATGTGGAATGCCATTATGCTCAAGCTAAGGTTGCT
GGTTTCATTTTCAATATTGGAGATTGTGCATTTGTAAAGGGTGAAGGCAAGAAAAAACAT
ATTGGCAGGATCTTGGAGTTTTTCAAGACGACAGAGGGGGAAGATTATTTTAGGGTACAA
TGGTTCTTCAGAGCTGAAGATACGGTGTTGCAAGGTGCGGCTTCTTTCCATGACCCAAAG
CGCGTATTCTATTCTACTTTGGAGAATGATAATTTACTAGACTGCATAGTTTCCAAAGTT
AACGTGGTAGAATTACCAACCAGGCATGATTTGAATAAAAAGGATGTTCCACCTGCTCAC
TTTTATTACGACATGGAATACTGTGTTGATTATTCCACATTCCGTACGTTGCATAATGTC
AAAAGCTCTGTCTCCCCTTCGCTAGTTGATGTGTCATATAAGCCTATCACTACATATCCT
CTGGAGGTATCACCAAGTTGTGAACCTATGAAAGTGGAGTTGTCATTATTGGATCTATAT
GCTGGTTGTGGCGGCATGTCAATGGGATTGTGCCTTGGCACAAAACTCTCTGGTCTTAAT
CTTGTGACGAAATGGGCAGTTGATTTTAATAAAGCTGCCTGTGATAGCCTGAAACTGAAT
CATCCTCAGACACATGTTAGGAATGAAGGTGTTGAGAATTTTCTAGAGCTACTGAAAAGA
TGGGAGAAGCTAATTAAGTCGTACGGCTGTAGTGATATCAAAACAAGCTCTAATATTGAG
CTAGACGACAGAGATGAAGGCGAAAACAATGATGATTCTCAGTCTGGTTCCAATGCATCT
TCTGGAGAATATGAGGTATTAAGATTCGTTGACATATGTTACGGGGATCCCAACAATGAC
GGAAAATCTGGACTTCATTTTAAGGTAGAAGCTTTTCTTTCATATTATGTTGGTTGTCCT
AGTTTAATGCACTTATAG