Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g005170.3.1
CDS Infomation

SolycHsfA1a
Sequence

ATGGAGCCGAATTCTTATGGCAGCGGGAAGGCTGCTGTCGGTGACGGAGTAGGAGCGCCA
ATGTTGCAGACGGCGCCGGCGCCGGCGCCGATACCCAGTGCGAATGCGCCGCCGCCGTTT
CTGGTGAAGACGTATGATATGGTGGATGATCCGAGTACGGATAAGATCGTGTCGTGGAGT
CCTACGAATAATAGTTTTGTGGTTTGGGATCCTCCGGAGTTTGCTAAAGACCTACTTCCG
AAGTACTTTAAGCATAATAACTTCTCCAGCTTTGTTCGGCAGCTGAATACTTATGGTTTT
AGAAAGGTTGATCCAGACCGCTGGGAATTTGCTAATGAGGGATTCTTAAGAGGTCAGAAG
CACCTGCTTAAAAGTATAAGTCGACGTAAACCTGCTCATGGACATGCTCAACAACAGCAG
CAGCCACATGGAAATGCTCAACAACAGATGCAGCCACCTGGACACAGTGCATCCGTTGGG
GCTTGTGTCGAGGTTGGGAAATTTGGGCTTGAAGAAGAGGTTGAGAGGCTGAAAAGGGAC
AAGAACGTGCTTATGCAAGAGCTGGTTAGGCTCAGACAACAGCAGCAAGCCACTGACAAT
CAGTTGCAAGGGATGGTGCAGCGCCTTCAAGGTATGGAGCTGCGACAACAACAAATGATG
TCGTTCCTGGCAAAAGCTGTCAACAGGCCTGGATTCTTGGCACAGTTTGTTCAGCAGCAA
AATGAGAGTAATAAGCGAATAGCTGAAGGCAGCAAGAAACGAAGGATTAAGCAGGATATT
GAATCACAGGATCCATCCGTTACTCCTGCGGATGGACAGATTGTTAAGTACCAACCTGGG
ATAAATGAGGCAGCAAAGGCAATGTTGAGGGAGCTTTCAAAACTAGATTCATCTCCTAGA
TTAGATAACTTCAGCAACAGTCCTGAAAGTTTCCTGATTGGTGATGGTTCACCACAGTCT
AATGCATCTTCAGGTCGTGTTTCGGGAGTCACTCTTCAGGAGGTCCCACCAACTTCTGGG
AAGCCCTTGCTGAATACAGCTTCAGCAATTGCAGGTCAAAGTTTGTTGCCAGCCACTTCT
GAGATGCAGTCATCTCATCTTGGCACATGTTCCGAAATCATCAACAATCAATTGTCAAAC
ATAATCCCGTTGGTAGGAGGTGAAGATTTGCATCCTGGTTCACTTTCTGCATCCGATATG
ATTATGCCTGAGTTATCACAGTTGCAAGGAATTTTGCCTGAAAACAATACAGATGTGATT
GGATGTGATTCTTTCATGGATACTAGTGCAGTTGAGGGAAAAGTGGGACTAGATATTATT
GGTAGTTGTTTGTCTCCTGGTGCTGATATTGACTGGCAGAGTGGTTTGCTGGATGAAATA
GAAGAGTTTCCTAGTGTGGGTGACCCTTTCTGGGAAAAGTTTCTCCAAAGCCCTTGTTCC
CCTGATGCTGCAATGGATGATGATATTTCAAACACAAGTGAAACCAAACCACAAATAAAT
GGATGGGATAAAACTCAGAACATGGAACATCTTACTGAACAAATGGGGGCTACTAATATC
AAACAACAAAAACATATGATCTAA

Peptide Sequence

PEP ID

Solyc08g005170.3.1
PEP Infomation

SolycHsfA1a
Sequence

MEPNSYGSGKAAVGDGVGAPMLQTAPAPAPIPSANAPPPFLVKTYDMVDDPSTDKIVSWS
PTNNSFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQK
HLLKSISRRKPAHGHAQQQQQPHGNAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRD
KNVLMQELVRLRQQQQATDNQLQGMVQRLQGMELRQQQMMSFLAKAVNRPGFLAQFVQQQ
NESNKRIAEGSKKRRIKQDIESQDPSVTPADGQIVKYQPGINEAAKAMLRELSKLDSSPR
LDNFSNSPESFLIGDGSPQSNASSGRVSGVTLQEVPPTSGKPLLNTASAIAGQSLLPATS
EMQSSHLGTCSEIINNQLSNIIPLVGGEDLHPGSLSASDMIMPELSQLQGILPENNTDVI
GCDSFMDTSAVEGKVGLDIIGSCLSPGADIDWQSGLLDEIEEFPSVGDPFWEKFLQSPCS
PDAAMDDDISNTSETKPQINGWDKTQNMEHLTEQMGATNIKQQKHMI*

Transcript Sequence

Transcript ID

Solyc08g005170.3.1
Transcript Infomation

SolycHsfA1a
Sequence

TCCAATTTTTTACCTCCGCCGGTTCATCTCAGTCATCATCTCTCTTTCTAAAAACTTCAC
TCACTCGCACTTTCTCTCTCTATAAACCTAGGGTTTTTTCTCTACCTCCATCCATGGATG
ATATTCCAAATTCAATTGATGCATAGCATGTAGTGTATTTATCATCGGAGTTTGATTTCA
TTCGACCTCGACCCGAATAGTTCCGGTTTGAGGTAGGTTTTATCGTGAATGGAGCCGAAT
TCTTATGGCAGCGGGAAGGCTGCTGTCGGTGACGGAGTAGGAGCGCCAATGTTGCAGACG
GCGCCGGCGCCGGCGCCGATACCCAGTGCGAATGCGCCGCCGCCGTTTCTGGTGAAGACG
TATGATATGGTGGATGATCCGAGTACGGATAAGATCGTGTCGTGGAGTCCTACGAATAAT
AGTTTTGTGGTTTGGGATCCTCCGGAGTTTGCTAAAGACCTACTTCCGAAGTACTTTAAG
CATAATAACTTCTCCAGCTTTGTTCGGCAGCTGAATACTTATGGTTTTAGAAAGGTTGAT
CCAGACCGCTGGGAATTTGCTAATGAGGGATTCTTAAGAGGTCAGAAGCACCTGCTTAAA
AGTATAAGTCGACGTAAACCTGCTCATGGACATGCTCAACAACAGCAGCAGCCACATGGA
AATGCTCAACAACAGATGCAGCCACCTGGACACAGTGCATCCGTTGGGGCTTGTGTCGAG
GTTGGGAAATTTGGGCTTGAAGAAGAGGTTGAGAGGCTGAAAAGGGACAAGAACGTGCTT
ATGCAAGAGCTGGTTAGGCTCAGACAACAGCAGCAAGCCACTGACAATCAGTTGCAAGGG
ATGGTGCAGCGCCTTCAAGGTATGGAGCTGCGACAACAACAAATGATGTCGTTCCTGGCA
AAAGCTGTCAACAGGCCTGGATTCTTGGCACAGTTTGTTCAGCAGCAAAATGAGAGTAAT
AAGCGAATAGCTGAAGGCAGCAAGAAACGAAGGATTAAGCAGGATATTGAATCACAGGAT
CCATCCGTTACTCCTGCGGATGGACAGATTGTTAAGTACCAACCTGGGATAAATGAGGCA
GCAAAGGCAATGTTGAGGGAGCTTTCAAAACTAGATTCATCTCCTAGATTAGATAACTTC
AGCAACAGTCCTGAAAGTTTCCTGATTGGTGATGGTTCACCACAGTCTAATGCATCTTCA
GGTCGTGTTTCGGGAGTCACTCTTCAGGAGGTCCCACCAACTTCTGGGAAGCCCTTGCTG
AATACAGCTTCAGCAATTGCAGGTCAAAGTTTGTTGCCAGCCACTTCTGAGATGCAGTCA
TCTCATCTTGGCACATGTTCCGAAATCATCAACAATCAATTGTCAAACATAATCCCGTTG
GTAGGAGGTGAAGATTTGCATCCTGGTTCACTTTCTGCATCCGATATGATTATGCCTGAG
TTATCACAGTTGCAAGGAATTTTGCCTGAAAACAATACAGATGTGATTGGATGTGATTCT
TTCATGGATACTAGTGCAGTTGAGGGAAAAGTGGGACTAGATATTATTGGTAGTTGTTTG
TCTCCTGGTGCTGATATTGACTGGCAGAGTGGTTTGCTGGATGAAATAGAAGAGTTTCCT
AGTGTGGGTGACCCTTTCTGGGAAAAGTTTCTCCAAAGCCCTTGTTCCCCTGATGCTGCA
ATGGATGATGATATTTCAAACACAAGTGAAACCAAACCACAAATAAATGGATGGGATAAA
ACTCAGAACATGGAACATCTTACTGAACAAATGGGGGCTACTAATATCAAACAACAAAAA
CATATGATCTAATCTCTATATGATATATGTACACAAATGTTAATTATGGTAGTTTCTCGA
CTTTAGCTTCTCTATAGTTACTATGTTTGGTTCGTCTTCTTTCTTCTCTTGTTCCTGACA
TGAAACTCAATGTACCTAATTAATCACTGAAAGATCTGCCCTCTCTTCTATACATCCCAT
ATCCCTTATGCCGTAGGGATAACCAGGGCCTGGCAGCTGCACATGTATTCATTTTTTTCT
TTCCTTTTTAATTTATTTTAAAAAAAATTAATATACAAGTGGG