Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g005070.3.1
CDS Infomation

Arf gtpase-activating protein, putative (AHRD V3.3 *** B9SNV8_RICCO)
Sequence

ATGGCCGCCGACAGTTTCACCGACAAGAATGCCGTTTTCCGGAAGCTCAAAGCCAAGCCC
GAGAACAAGATGTGCTTTGATTGCAATGCGAAGAATCCTACATGGGCGTCGGTTACGTAT
GGGATCTTCTTGTGTATTGATTGTTCGGCAACGCATCGTAGCCTTGGTGTTCACATCAGT
TTTGTTAGGTCGACAAATTTAGATTCATGGTCACCAGATCAGTTGAAGATGATGTACTTT
GGTGGAAATAACCGTGCTCAAGTTTTTTTCAAGCAGCACGGATGGACGGATGGAGGCAAG
ATTGAAGCCAAGTATACCTCCAGGGCTGCCGAATTGTATAAACAATTACTCTCAAAAGAA
GTGGCTAAAAGTAAAGCAGAAGATACAGGTTTGCCAACATCACCTGTTGCCTCTCAGCTT
GTGCAGACTACAAATGGATTTTCTAATATTAAGATTAGTGAAGCTCCAAAAGAAACCTCA
TTATTTAAGGATGAAACACCAGAGGTTTCTGCTTCACCCAAAGCTTCACAATCAATGTTT
ACTACTTCGATTAAAAAACCTATAGTTGCAAAGAAATCTGGCAAGCCAGGTGGACTTGGA
GCTCGTAAACTTACTAAAAAGACCAGTGAAAGTTTGTATGACCAGAAGCCCGAAGAACCG
CCTGTTCAAGTTTCTTCCTCCAACCCTGCAAGTAGTGCACCAACTGGTGGCTCATCATTC
ACATCTCGCTTCGAGTACACGGACAATGTCCAATCCTCTGAGATGAGTTCTGGACGTGTT
CTTAACCATGTATCCCCTCCAATGTCCTCCAATTTTTTTGCGGACTATGGAATGGAAAGC
GGTTTCACAAAGAAAAGCTCAAAATCTTCCAAAGTTCAAATCGAGGAAACTGATGATGCA
AGGAAGAAGTTTACTAATGCAAAAGCAATTTCATCTGCCCAATTCTTTGGTGATCAGAGC
AAAGCTGAAATGGAAGCCTCAGTTTCTCTTAAGAAGTTCTCGGGTTCAAGTGCCATATCA
AGTGCAGACCTTTTTGGTGACGATGATAGATCAGATTTGGACCTCACTGCTGGTGATCTC
ATTAACCGGATCTCATTCCAGGCACAACAGGACATGTCCTCTCTGAAAAACATGGCTGGA
GAAACTGGAAAGAGACTTGGCTCATTTGCATCAACATTAATCTCCGATTTTCAAGACCGC
ATCCTGTGA

Peptide Sequence

PEP ID

Solyc08g005070.3.1
PEP Infomation

Arf gtpase-activating protein, putative (AHRD V3.3 *** B9SNV8_RICCO)
Sequence

MAADSFTDKNAVFRKLKAKPENKMCFDCNAKNPTWASVTYGIFLCIDCSATHRSLGVHIS
FVRSTNLDSWSPDQLKMMYFGGNNRAQVFFKQHGWTDGGKIEAKYTSRAAELYKQLLSKE
VAKSKAEDTGLPTSPVASQLVQTTNGFSNIKISEAPKETSLFKDETPEVSASPKASQSMF
TTSIKKPIVAKKSGKPGGLGARKLTKKTSESLYDQKPEEPPVQVSSSNPASSAPTGGSSF
TSRFEYTDNVQSSEMSSGRVLNHVSPPMSSNFFADYGMESGFTKKSSKSSKVQIEETDDA
RKKFTNAKAISSAQFFGDQSKAEMEASVSLKKFSGSSAISSADLFGDDDRSDLDLTAGDL
INRISFQAQQDMSSLKNMAGETGKRLGSFASTLISDFQDRIL*

Transcript Sequence

Transcript ID

Solyc08g005070.3.1
Transcript Infomation

Arf gtpase-activating protein, putative (AHRD V3.3 *** B9SNV8_RICCO)
Sequence

GCAAAAAAGTAGATACTTGACTCTTCACTCTAAATGCAGAATGTAAACAAGATACAACAC
ATGTTGGAGGTGAGTTATGTCATCAACCAAAAAAAACCCCTAAAGGTACAATCTTTTTAA
GCAATTCAAGCACAAGTAATCAAATGCAAAAACATAAGCACGGGGTCTGTCCTTACCACT
ACTACCTTAGCGAGGCGGTTCCCCTCAACTCGAGTAAAACAATTACAAAGGGAAACAAAA
TAGCAATAACAAATCATTTAGTGCAAAATGAAACAGAGAAAACAGGAGATGACCATGGTA
TGTATTTGATGGAGAATCCATTAGGTTCATGTCGAAACTTGATGAGTGAATCTGGAACTT
TCTTGTTCAGCTCTTTCAGTATCTCAGAAAGTGGTCTGCTGATTCCTGAAGTTAGGTCTT
TTTCTGAATCAAACATCAATCTCTCTCTGTCTTTGTCTTTCGGTGAAGAAGAAGCCTTAG
CAGAGATGGAGCGTTGGCACAATCGGAGTTTATTCAAAACACAAGAAGAAGAACGCGATG
AAGAAAATGCCATGGCTTTTCCCCTTCAACTTCACTCAAAAACCCTCAACCAAATTTTCA
AATAACCAGTTAAAAGAATTTCAAAAACATATATAAATTATATCGCTTTTTTTCGAAAAA
AAAAATTCAAATAATTAATCAATTAAATTTCTAAGATTTTTATTGTTATTGCTACTTTAT
AAAGGTAATAATAAACAAACAGTTACTTGGTACTATTATTTTATATAAATATTAATTATT
CGCCTGTATTATATAAATAAATAAATAAATTATTTCTTCAACTAATATTAAGTTCTATGC
ATAAATAATTAATGGCTTAATTAGGTATGAAACATAACATCCAAAGAAGGTGTTAGCGGT
GATCGATATTTGTTTGTGCATCTTCTCTGTATGTTCCCTGAGGAGGCTTCTTTCTCTCTC
TAAAATAGATTCATTCCTCCTCCTCCTCACGGAACTTCACTCTTTCTCTCTCTACAATTT
GTATTCCTCTCTACAGCCATGGCCGCCGACAGTTTCACCGACAAGAATGCCGTTTTCCGG
AAGCTCAAAGCCAAGCCCGAGAACAAGATGTGCTTTGATTGCAATGCGAAGAATCCTACA
TGGGCGTCGGTTACGTATGGGATCTTCTTGTGTATTGATTGTTCGGCAACGCATCGTAGC
CTTGGTGTTCACATCAGTTTTGTTAGGTCGACAAATTTAGATTCATGGTCACCAGATCAG
TTGAAGATGATGTACTTTGGTGGAAATAACCGTGCTCAAGTTTTTTTCAAGCAGCACGGA
TGGACGGATGGAGGCAAGATTGAAGCCAAGTATACCTCCAGGGCTGCCGAATTGTATAAA
CAATTACTCTCAAAAGAAGTGGCTAAAAGTAAAGCAGAAGATACAGGTTTGCCAACATCA
CCTGTTGCCTCTCAGCTTGTGCAGACTACAAATGGATTTTCTAATATTAAGATTAGTGAA
GCTCCAAAAGAAACCTCATTATTTAAGGATGAAACACCAGAGGTTTCTGCTTCACCCAAA
GCTTCACAATCAATGTTTACTACTTCGATTAAAAAACCTATAGTTGCAAAGAAATCTGGC
AAGCCAGGTGGACTTGGAGCTCGTAAACTTACTAAAAAGACCAGTGAAAGTTTGTATGAC
CAGAAGCCCGAAGAACCGCCTGTTCAAGTTTCTTCCTCCAACCCTGCAAGTAGTGCACCA
ACTGGTGGCTCATCATTCACATCTCGCTTCGAGTACACGGACAATGTCCAATCCTCTGAG
ATGAGTTCTGGACGTGTTCTTAACCATGTATCCCCTCCAATGTCCTCCAATTTTTTTGCG
GACTATGGAATGGAAAGCGGTTTCACAAAGAAAAGCTCAAAATCTTCCAAAGTTCAAATC
GAGGAAACTGATGATGCAAGGAAGAAGTTTACTAATGCAAAAGCAATTTCATCTGCCCAA
TTCTTTGGTGATCAGAGCAAAGCTGAAATGGAAGCCTCAGTTTCTCTTAAGAAGTTCTCG
GGTTCAAGTGCCATATCAAGTGCAGACCTTTTTGGTGACGATGATAGATCAGATTTGGAC
CTCACTGCTGGTGATCTCATTAACCGGATCTCATTCCAGGCACAACAGGACATGTCCTCT
CTGAAAAACATGGCTGGAGAAACTGGAAAGAGACTTGGCTCATTTGCATCAACATTAATC
TCCGATTTTCAAGACCGCATCCTGTGAGGTTACAGGACCAGAATATTTCAGGCAGATGCA
AACATTTTGTATGAAAAATAATATTGGAATGCAACTCTATATACAGGCTTTGAAGAAGCT
GGTCTTGCCATGTTAAAAATTTCTGTTTCTTTGTATTTGTTTGGTTGTCGGTGAGGTTTG
TAGAGCTTTTGTTCAACAATTTACTGTGTCTGAGTTGTGAAGTCGTTCAATTGTAAACTA
TAGTGAAAACTCTTTAGATTTTATCCTCTTTATATATATATACATACACATTATGTTTAA
TTTAGAATTAGGTGACCACATATAAATAAACAGCTTATCATTTTAATTTAATTTTTTTTA
CAATAATTACTAAATAATAATTAAATTTCAAGAACCGTTAAGACTAGAAA