Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g066280.3.1
CDS Infomation

RNA methyltransferase family protein (AHRD V3.3 *** AT5G64150.1)
Sequence

ATGAGGCTAACTAAACTATCCGAACGAAGATTGAGACCTGCCTGTGTGTCGAAGAAAATG
AAGTTGAGCTTCATTCGACCAATTTCATGTTGCTCTGTTTCATCTCCAGCAACCTCAGTG
AAACCTCAAAAACCTATATTTTTAAGGCCACCCACCTTCAAAACAACCATATCAGACCTT
CAAAAATGGCATCATTGGGCTAAATCCCTAATTTCTTCTGTGGGTTCCACTTTCTTGGAA
CTGGACAATGGTCCAGACTCCGAATTGTTGCTCAGGGAGCTAAATTGGCTTGTTGAAGAT
GCAATTGAAACACCAAAATCTTTCTTGCAACAACCCCACAAAAATTACAATGATAATAGC
TCAGTTGCAGTTCGGGCGTCTTTGGAACAACTGTATATGTTGTGGAAACGAAGGGTAGAA
GAAAGAATGCCATTTCAGTATGTGGTTGGCTGTGAACATTGGAGGGATTTGGTTTTGAGT
GTTCAAGAAGGGGTTTTGATTCCAAGGCCAGAGACTGAGCTGATTGTGGACCTTGTCGAT
GATGCTATTAAGGAGAATGGGGAATTGAGGGAAGGATTGTGGGCTGATTTGGGGACTGGA
AGTGGTGCACTTGCTATTGGGATTGCAAGGATTTTGGGTACTTCTGGTAGAGTTGTTGCT
ACTGATTTAAGCCCTGTTGCTACTGCAGTTGCATCTTATAATGTGCAGAGGTATGATTTG
GAGGAAAAAGTGCATGTAAAGCAAGGATCTTGGTTTGAACCTTTGAGAGATAATGAAGGA
GAATTTGTGGGACTGGTCAGTAATCCACCATATATTCCAAGCAAAGATATTGGTGGACTA
CAAGCTGAAGTTGGCAGACATGAACCTAGACTGGCGTTAGACGGTGGAGCAAGTGGTATG
AATGACCTTATCCATCTCTGTGATGGAGCTGTTTCAATGTTGAGACCTGGCGGTTTCTTT
GCGTTTGAGACAAATGGTGATGAACAGAGCAAATTCCTAGTCCACTACATCGAGACTAAG
AAGCAAGGTAACTTCTCTAAAGTGAAGATGGTATCAGATTTTGCCGGCATCAAGAGATTT
ATAACAGGATTTAGAGGAAGATGA

Peptide Sequence

PEP ID

Solyc07g066280.3.1
PEP Infomation

RNA methyltransferase family protein (AHRD V3.3 *** AT5G64150.1)
Sequence

MRLTKLSERRLRPACVSKKMKLSFIRPISCCSVSSPATSVKPQKPIFLRPPTFKTTISDL
QKWHHWAKSLISSVGSTFLELDNGPDSELLLRELNWLVEDAIETPKSFLQQPHKNYNDNS
SVAVRASLEQLYMLWKRRVEERMPFQYVVGCEHWRDLVLSVQEGVLIPRPETELIVDLVD
DAIKENGELREGLWADLGTGSGALAIGIARILGTSGRVVATDLSPVATAVASYNVQRYDL
EEKVHVKQGSWFEPLRDNEGEFVGLVSNPPYIPSKDIGGLQAEVGRHEPRLALDGGASGM
NDLIHLCDGAVSMLRPGGFFAFETNGDEQSKFLVHYIETKKQGNFSKVKMVSDFAGIKRF
ITGFRGR*

Transcript Sequence

Transcript ID

Solyc07g066280.3.1
Transcript Infomation

RNA methyltransferase family protein (AHRD V3.3 *** AT5G64150.1)
Sequence

GGTTTAACCAAATTTAATAAATAGGGTACATTTTCAAAATTCAATCACTTTTGCTCACTT
TTTTATGTTTTAAGTACATCTCCCTTTTTTTAACAGATACAAGGAACCAAAAAAAAAAAA
AGGCATTATTATAGTTTTAACACCAAACAAGCTAAGCTAACAGTTTATTTTCTTTTGCAA
AGCAAGCATTCTTGAGCAAAACCCAAACTTGGCTAGTGGAAAATCCAATGTGGCAACCAA
ACTTGGCTAACTACTTCACAATCACGCCCATTCACAGTAGCAGACAACTTAGAATCAGAT
ACATTCATCCTTTGACTCTATGCACATATTCATTACAAAAACACGGCCCTTTCTTTCCTT
TTCTTAAGTGCAGTTGGAGGATCATTTTTCATGTACTATAATATATGTGCATAGCAACTT
CGTAGCTTCATATGAACATTCGAAGAATAAGTAAGATACATGATTAATACTACAGAGGAA
TGTTACAAATGTAGACGTCACTAAATTCTTCCTCAAAGCTTACAAGTTACAGGAGAAGTA
GCCTCTAATTAGCAAATTATAAGTCTTAAAAAACAACCTTCCAACCAAGTCATTGAAAAA
TTGTTTATAGCGTCAGATTCCATTATCAAATTACCATGAAAATAAATATTTTCAGATGAG
AGTTGGGACGCTGACCTTAACAGCGTAACTCGGGAGCGAGCACTGATCACTGGCCAGAAC
TGAGCAGGAGTAGCGGCTGACGAGAGTTGCGAGACGACGAGCAAGTGACGAGATTTCAGT
TTAGAATTTCTGATTTGGGAAAATTGGGTTTTGGGCCAAATTTGAATATGGGTTGTGGGC
TTACTATGGGCCATGTCGTATGGGCTAAAGTAATTTAATTGGGCCTCAAAACAAATAGAG
CGGGTCAAAACCAACAAAAGAAATGAGGCTAACTAAACTATCCGAACGAAGATTGAGACC
TGCCTGTGTGTCGAAGAAAATGAAGTTGAGCTTCATTCGACCAATTTCATGTTGCTCTGT
TTCATCTCCAGCAACCTCAGTGAAACCTCAAAAACCTATATTTTTAAGGCCACCCACCTT
CAAAACAACCATATCAGACCTTCAAAAATGGCATCATTGGGCTAAATCCCTAATTTCTTC
TGTGGGTTCCACTTTCTTGGAACTGGACAATGGTCCAGACTCCGAATTGTTGCTCAGGGA
GCTAAATTGGCTTGTTGAAGATGCAATTGAAACACCAAAATCTTTCTTGCAACAACCCCA
CAAAAATTACAATGATAATAGCTCAGTTGCAGTTCGGGCGTCTTTGGAACAACTGTATAT
GTTGTGGAAACGAAGGGTAGAAGAAAGAATGCCATTTCAGTATGTGGTTGGCTGTGAACA
TTGGAGGGATTTGGTTTTGAGTGTTCAAGAAGGGGTTTTGATTCCAAGGCCAGAGACTGA
GCTGATTGTGGACCTTGTCGATGATGCTATTAAGGAGAATGGGGAATTGAGGGAAGGATT
GTGGGCTGATTTGGGGACTGGAAGTGGTGCACTTGCTATTGGGATTGCAAGGATTTTGGG
TACTTCTGGTAGAGTTGTTGCTACTGATTTAAGCCCTGTTGCTACTGCAGTTGCATCTTA
TAATGTGCAGAGGTATGATTTGGAGGAAAAAGTGCATGTAAAGCAAGGATCTTGGTTTGA
ACCTTTGAGAGATAATGAAGGAGAATTTGTGGGACTGGTCAGTAATCCACCATATATTCC
AAGCAAAGATATTGGTGGACTACAAGCTGAAGTTGGCAGACATGAACCTAGACTGGCGTT
AGACGGTGGAGCAAGTGGTATGAATGACCTTATCCATCTCTGTGATGGAGCTGTTTCAAT
GTTGAGACCTGGCGGTTTCTTTGCGTTTGAGACAAATGGTGATGAACAGAGCAAATTCCT
AGTCCACTACATCGAGACTAAGAAGCAAGGTAACTTCTCTAAAGTGAAGATGGTATCAGA
TTTTGCCGGCATCAAGAGATTTATAACAGGATTTAGAGGAAGATGATCTGTGACATTAGC
CAAAGAAATCATACAAGGGAATGAATGTGGAAGAACCAGGGGTTTGGGGGCTACAGATTC
TGTTCTCTTGGGTTTGAACAATTCAGTTTTGCTCTTTGGACTTTACAGAAAGATATATTA
TCTCAGATTGTCTCTGATCTTGTGCAAAGAGTCATTTACTACTCTCTAGTAGGCAAACTT
CAGTGTAAAGTGATTAAAGGCTAGTGCAAGTTTGAAAACCAAAAAAAAAAAAAACTACTG
CACTCCTTGCAATTTATGAAATTAGGATCAGATCTTTTTTCATCAGCTAGTGTCTCAGTT
TGGTTGAAAGATGATCATGATCTGACTACTCTTAATTATTCCCAGTGAAACATAAATTTT
AATGCTTATTTGCTCAAAAACAAGGATCTAAAATCTGGATTATATTTGCACCCAATAGAT
CTAAATCAAAACCAAGAGAAGAAAAACTGAACACTAAACTCTCGCTGTGTCCAAATCCAC
TAACTTCACATAAAGGTATTAGAAGGAAAGAATGTAGATCTCGTGTTTAAATATGTGGAA
TGAGCAGGATCAACAGTATGAATTGTCCTACAACTGCATTGCACAGAAGAGTACAATTTT
TTTTCTCTGAAATTTATTACACCTCAAGTAGTCCAAGTCCAGGCAGGATCATCAGATGTA
CAAAGATTTGCTCAGTTTTGTTCCTCCTAATCAATTCAAAGGATCTAACTCAAAACTTGG
CGTTGCAATAGATAAATGCTGCTGGATAATTAGGATACAACATATCTTAGTGTAATCCCA
CATAGTCTGGAAAGGGTGGTTGTAAGCAAGCCGGATAATTAGGATGATATATACAAATGG
ATCAGCTAACCAGCACATTTATACTTGTTTAGCCAAACCAACAGATGAGCTCTCCCCTGA
TGAGAAGTTTGGTCATCTCCATGTTGATGCATATGAAACCTTAAGATATCACATCATGTC
TTTTTATCCTCGTTTTTCATTTTGTCCTGATTTTAGGGGGCAGTGGATGTTGAATCATCA
CAAAAATGGCATCTGAGCATCGTAACCGATTATGATGCATGTAACTCATGAAGACCTTCT
CCATTGCTTCTTTCCTTTCATCTGATTCAACTTGAAAGGACTCCAAGTTTTTCTCCGCTT
TGGCGTCTCACAAAAAAGTCCAGATGCTAGAGCTTGCTGGAGCCACAGCTCGAATTCTTC
ATCTTCATCTGTCATCTCAGCATCAAAATCCCAGGGGTACCTACTTGAATTGGATCTCTG
GGATGATTTCTCTAATCCAACCATGTTCACATGGAAACTCGGTCTATGTGTATTTGGTCT
ACAAGCCATGCCCTGCACAGAGGAGATTCGTAATACAAAAACTAGCAGCAAAGGCCATAT
TTCCATCTTTTTCATAATGACAGAATACTGACCTGACATATGGCCCATTCCGACACATCA
AATATCTTGCCTTCAGCACAAACGAAAGCACGAGGTATCTCCGCCTGAATGACAAGTATA
TTTACAAACATTATGAAGAATGAGCATCTTATGGACGCACATCAAGAGAAAGCATGATCA
ACTAAACTACAGCTGAAAGGAAGGGAAACCACTGTTCATGTGCAGCTAGATGCTGATTTC
AACTCTTTGAAGTTGACATTTGACTAGTAGTGCCACACTAATTGGCCAGAGTATTAATAT
TTGATTGTACCCTCTAAGCACATAAATACAGTAACTCATACAGTTAAAAAGTGGAGAACC
ACCCTATATACCATTAACTTGATCACATAAACCATGTTAAGATTTGACCAAACCAGAGGA
AAATCCTAGAGACAGATGATGGACTTGCTTCATTGCACCATCAACAATTTGAAGCTTGGT
AATGCAGCCAAGGTAAACCATTAAGTACAAGAGTCCAAATATTTTGAATTGATCTAAGTA
TTTATATTTTTTGATAAATTGCTTCCTACAATATCTATTGAAAATCGAACTTGACAGTAA
TGATCTAGTATAACGTGCAGCTTTTTTTGTGACTATAATATATGT