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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g065540.1.1
CDS Infomation

Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A072UY96_MEDTR)
Sequence

ATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATT
TGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACT
TTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATC
ACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATC
TACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAG
CTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCA
GCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTC
AGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATT
CCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCT
CCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAA
GTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGAT
GGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTT
AAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATAC
CAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGA
GCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAA
ATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCG
CTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCG
CCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCA
TCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGAT
TTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGT
TTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGA

Peptide Sequence

PEP ID

Solyc07g065540.1.1
PEP Infomation

Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A072UY96_MEDTR)
Sequence

MQLPSSATVAAVVLSVVLFICATEAHNITHILADHKQFSTFNHYLTTTHLAAEINRRQTI
TVCAVDNAGMSDLLSKQLSIYTIKNVLSFHVLLDYFDAKKLHQITNGTALAATMFQATGS
ATGSSGFVNITDLRGGKVGLSPADYNGPPPAKFVKSIAEIPYNISVIQISTILPSDEAEA
PTPGPSQMNLTSLMSAKGCKVFAETLLASPAEKTFEDNVDGGVTIFCPRDDAMKKFLPKF
KNLTAEGKQSLLEYHGIPIYQSISNLKSNNGDMNTLATDGAKKYAVVIQNDGEDVTIKTK
IVTAKITATVVDKLPLAIYSLDKVLLPEELFKASPTPAPAPAPEARAESPKHSKSPPAPA
SPAESPADSPADGPNGDADDLTDSGAVKYNAGASLAAVFSLWFAFNVLMEV*

Transcript Sequence

Transcript ID

Solyc07g065540.1.1
Transcript Infomation

Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A072UY96_MEDTR)
Sequence

ATGCAGCTTCCGTCGTCGGCCACCGTGGCTGCGGTGGTTCTCTCCGTAGTCCTTTTTATT
TGTGCCACTGAAGCTCATAACATTACTCACATTCTAGCCGACCATAAACAGTTCTCCACT
TTCAACCATTACTTAACAACTACACACCTCGCCGCTGAAATTAACCGCCGGCAAACCATC
ACTGTTTGTGCTGTAGATAATGCCGGAATGTCAGATCTACTCTCCAAACAACTATCTATC
TACACTATAAAAAACGTTCTCTCTTTTCACGTGCTTCTCGATTACTTCGACGCTAAAAAG
CTTCACCAGATTACTAACGGCACGGCACTTGCCGCCACAATGTTTCAAGCTACCGGCTCA
GCTACCGGATCTTCTGGATTCGTAAACATTACTGATCTAAGAGGAGGTAAAGTCGGGCTC
AGTCCGGCTGATTACAACGGTCCTCCTCCGGCTAAATTTGTAAAATCAATCGCCGAGATT
CCTTACAACATCTCCGTTATTCAAATAAGTACGATTTTACCCTCAGACGAAGCTGAAGCT
CCGACTCCAGGACCAAGCCAAATGAATCTCACTTCTCTAATGTCAGCTAAAGGCTGCAAA
GTTTTCGCCGAGACTCTATTAGCTTCTCCGGCTGAAAAAACGTTTGAGGATAACGTTGAT
GGCGGAGTAACAATATTTTGTCCACGAGATGATGCAATGAAGAAATTTTTGCCTAAATTT
AAGAATTTAACAGCGGAAGGGAAGCAATCACTGCTCGAATATCATGGAATTCCTATATAC
CAATCGATTTCGAATTTGAAATCGAATAATGGAGATATGAACACTTTAGCTACTGACGGA
GCTAAGAAGTACGCTGTAGTCATTCAAAATGACGGTGAAGATGTTACTATAAAAACGAAA
ATTGTGACGGCGAAGATCACGGCTACTGTGGTTGATAAACTGCCATTAGCGATTTACTCG
CTTGATAAGGTGTTATTACCCGAGGAATTGTTCAAGGCTAGTCCTACTCCGGCGCCGGCG
CCGGCACCGGAGGCACGTGCTGAATCTCCTAAGCACTCCAAGTCACCACCGGCACCTGCA
TCTCCGGCTGAGTCTCCAGCGGATTCTCCGGCGGATGGTCCCAACGGTGATGCTGATGAT
TTGACAGATAGCGGTGCTGTTAAGTACAATGCCGGAGCATCACTTGCCGCCGTTTTCAGT
TTATGGTTTGCCTTCAACGTGTTGATGGAAGTTTGA