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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g065350.2.1
CDS Infomation

Pectinesterase (AHRD V3.3 *** K4CHL3_SOLLC)
Sequence

ATGAAGTTAAATTTTTTTATCAACGTTTGGAGTTTGATGTTTTTGTTCATTTTTTGTGCT
AGTAAATTGGAGGCTCGACGTTACGTTACGTGGAACGATTTTAAGATAAATTTTCCTAAT
ATTGATATAAGTAATGGAAATTTACGTAAGTCTCATGGTATTATCGTAGTCGATTCGAGG
GGTTACGGAGACTCCGTTACTGTACAAGGTGCAATCGACATGGTCCCCGAATTTAATTCT
CAACGAATCAAAATTCTTGTTCTTCCCGGAGTTTATAGAGAAAAAGTGTTTATTCCATCT
TCAAAGCCATTTGTTTCATTAATTGGTGATGAAAATCATCCTAGAAGAACAATAATTACT
GGGAATTCTAAGGCATGTGATAAAGATCAATATGGTAATGAAATAGGCACTGTTGCAACA
GCCACAGTTACTGTGGAATCTGATTATTTTTGTGCAACTGGCATAACCTTTGAGAATACT
GTGGCTGCAATGCGTCAGGAAAATGATAAGCAAGGTGTGGCATTGAGATTAGCTGGTGAT
AAAGCAATGTTATACAAAGTTAGAATTTTGGGATCACAAGACACACTTTATGATGATAAA
GGATCACATTATTTTTTCAAGTGTTACATTCAAGGAACTGTTGATTTCATTTGTGGCAAT
GCTAGATCACTTTTTCAGAGTTGTGAACTACATTCAATAGCTCCAGATAATGTGGGAATA
TCAGGAGCAATTGCAGCACATGAAAGAGAATCACCTTATGATGATACTGGATTCTCATTT
GTTAATTGTAAAGTTACTGGAAGTGGAAGTGTATTTTTAGGCAGAGCTTGGGGAGAATAT
TCAAGGATTATTTACTCAAAATGCTATTTTGATGCAATTATTCATCCACAAGGATGGTCT
GATTGGGACGTACCATCTAGACAAGAGCATGCATTTTTTGGAGAATATAGTTGCAAGGGA
ATTGGAGCAAATAGAGCAGGTCGAGTGCCATGGTCTAATGATTTCACTCAACACCAAGCT
CAACCCTTCATGAAAAGAGACTTCATTGGTGGAGATGAATGGCTAAGAATTTAG

Peptide Sequence

PEP ID

Solyc07g065350.2.1
PEP Infomation

Pectinesterase (AHRD V3.3 *** K4CHL3_SOLLC)
Sequence

MKLNFFINVWSLMFLFIFCASKLEARRYVTWNDFKINFPNIDISNGNLRKSHGIIVVDSR
GYGDSVTVQGAIDMVPEFNSQRIKILVLPGVYREKVFIPSSKPFVSLIGDENHPRRTIIT
GNSKACDKDQYGNEIGTVATATVTVESDYFCATGITFENTVAAMRQENDKQGVALRLAGD
KAMLYKVRILGSQDTLYDDKGSHYFFKCYIQGTVDFICGNARSLFQSCELHSIAPDNVGI
SGAIAAHERESPYDDTGFSFVNCKVTGSGSVFLGRAWGEYSRIIYSKCYFDAIIHPQGWS
DWDVPSRQEHAFFGEYSCKGIGANRAGRVPWSNDFTQHQAQPFMKRDFIGGDEWLRI*

Transcript Sequence

Transcript ID

Solyc07g065350.2.1
Transcript Infomation

Pectinesterase (AHRD V3.3 *** K4CHL3_SOLLC)
Sequence

ATTGACTATTTTTCAATGACTTTGTGTAAGTGTAGCATTTCGATAATATAAAATAAATAA
AAATGCTTTAATTTTAATATACAAGGAGTAAATCCGAAACTCACACACATTATAAGAATA
TTAAGTATAATTATCTCTAAAAAATCATATTCACATAATCACATAATTTAATCTTCTTCT
ACAATTAGAATTCTTCAAATCAATTTCCATTTCACCTATAAATAAATTCATTAACTATAC
TTCATTATCTCCATCTCAATTAAACTCCAAAACAAAAATTACTAATCTTTTTTTCTTCTC
AATATGAAGTTAAATTTTTTTATCAACGTTTGGAGTTTGATGTTTTTGTTCATTTTTTGT
GCTAGTAAATTGGAGGCTCGACGTTACGTTACGTGGAACGATTTTAAGATAAATTTTCCT
AATATTGATATAAGTAATGGAAATTTACGTAAGTCTCATGGTATTATCGTAGTCGATTCG
AGGGGTTACGGAGACTCCGTTACTGTACAAGGTGCAATCGACATGGTCCCCGAATTTAAT
TCTCAACGAATCAAAATTCTTGTTCTTCCCGGAGTTTATAGAGAAAAAGTGTTTATTCCA
TCTTCAAAGCCATTTGTTTCATTAATTGGTGATGAAAATCATCCTAGAAGAACAATAATT
ACTGGGAATTCTAAGGCATGTGATAAAGATCAATATGGTAATGAAATAGGCACTGTTGCA
ACAGCCACAGTTACTGTGGAATCTGATTATTTTTGTGCAACTGGCATAACCTTTGAGAAT
ACTGTGGCTGCAATGCGTCAGGAAAATGATAAGCAAGGTGTGGCATTGAGATTAGCTGGT
GATAAAGCAATGTTATACAAAGTTAGAATTTTGGGATCACAAGACACACTTTATGATGAT
AAAGGATCACATTATTTTTTCAAGTGTTACATTCAAGGAACTGTTGATTTCATTTGTGGC
AATGCTAGATCACTTTTTCAGAGTTGTGAACTACATTCAATAGCTCCAGATAATGTGGGA
ATATCAGGAGCAATTGCAGCACATGAAAGAGAATCACCTTATGATGATACTGGATTCTCA
TTTGTTAATTGTAAAGTTACTGGAAGTGGAAGTGTATTTTTAGGCAGAGCTTGGGGAGAA
TATTCAAGGATTATTTACTCAAAATGCTATTTTGATGCAATTATTCATCCACAAGGATGG
TCTGATTGGGACGTACCATCTAGACAAGAGCATGCATTTTTTGGAGAATATAGTTGCAAG
GGAATTGGAGCAAATAGAGCAGGTCGAGTGCCATGGTCTAATGATTTCACTCAACACCAA
GCTCAACCCTTCATGAAAAGAGACTTCATTGGTGGAGATGAATGGCTAAGAATTTAGGTT
AATTATGTTTTATTACTTTTTGACAAAGTGCAGCAAAAAAAAATTAGGCTAAATTACCTT
CATTTTTATATTTTATTGGTAGGATATAATCAAACATTTTGTGTCATACCCTTTCTTTTA
TTCCTATTTATTTATATACAAGTGTGTTCTAGAATGTTGGTAGTATGAATGAATATATCA
ATATTGATAGTATGAATGAATTTTTTAGTATTGGATGTGAAAAAGTATTGAGATTTTAC