Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g064950.3.1
CDS Infomation

trigger factor type chaperone family protein (AHRD V3.3 *** AT5G55220.1)
Sequence

ATGGCGACTCCAATTTCCATTCAATTGAATCCTTCAATTCTCTCATTTCCATCAAATTCT
ACAAAAGCTCAATTTTTTCAACTCAATGATAAATTCTTGCTTAAACCCAATTTATCTTCC
CGCCAATTCTCCTCCTCCTTGGTGGCTTCAGCTCGATTGGTGGCGGCGGCGGCAGCAGCA
GCTTCTGGTGTTGTTGAAACTGTTGAAGATAAACTTCCAGCTGATCTTCATGTTACTGAA
ACACAGGAACCCAATTCAAGAATCAGATTGACTGTAGAAGTTCCAACTGTTGTATGTGAG
GATTGCTACAAACAAGTCATAAAAGAGTTCATGAGACGTTCAAAGGTTCCTGGATTTCGT
CCAGGGAAGAATGTTCCAGAAGATATCCTTGTTGGCTTTGTCGGGAAGCAAAATATTCAA
AATGCTGTAGTTGAAGCTATTCTGAAAAGAACACTTCCACATGCCATGTCTTCGGTTACC
CGGAACGCATATGAAGACTCCATCCGCATTGTGACCAAATTTGAAGACATGGAAAAGACT
TATCTGTCTCTGAATTGCTTGAGGTATGATGTGGTTGTTGATGTGGCTCCTGAAATCAAG
TGGAAACCTGACGATGCATACAAGAATATTAAGGTGGCTGTTGAGCTTGACAGCGATATG
GATGCTCAAAGAGCTTCAGAAAAAGAGTTGATACGGCGTCACAAGTCTCTGGGTGCATTA
AAAATTGTTACTGATAGGGGTTTACAGGTTGGCGATGTCGCAGTGATTGATATATCAGCA
ACTACGATTGAGCAAGATGGATCAGACGCTAAAACCATACCAGCTGCAGAGAGTAAAGGT
TTCAATTTTGATACAGAAGAGGGAGATAATGTCCTTCCCGGATTTCGTGACTCAATTATT
GGTATTAAACGAGGTGAAACGAAGTCATTCCCTTTGGTATTTCCAGACTCATGGAAACAA
GAAGATCTTCGTGGTGTTCATGCTCAATTCACTGTTGCATGTAAGGAACTGTTTTACAGA
GATTTGCCCGAGTTGAATGACGCGATGGCTGAAAGGCTTCTCCCAGGATGCAGCTCCATT
GAGGAGGTCAAACAAGCGTTGCTACAAAGATGTCTTGAAGTCGAACAGGCAGCTAAAGAC
CAAGCAACTGATAATGCCATCCTTGACCAGCTATACAAGATGGTTGAAGTTGATATTCCT
CAATCTCTCTTCCAAGAGCAAGGAAGACAACTCTATGGAGCTCAACTTTTACAATTGCAG
GCAAATATGAAACTGAACGAACAGCAGCTGGCATCGTTATCAAGCCCCAGGGCTGTGAAT
GAGTTCCTTGAGACACAAAAAGAAAATATAATAAGTATCATAAAACAAAATTTAGCTGTT
GGTGACATATTTACACGTGAAAATTTGCAGTTTTCAACAGAGGAGCTAGTGAAGGAGGTT
CAGAACTCAATTCAAGAATTCCAACAGCATCAACAGGAGTACGATGAGGACCGAGTTAAG
CTGCAGGTACAAGAGGTACTTGAAGGGGCTAAAGTACTTGAATGGCTAAGGGAAAATGCA
GAGATTCAGTACATAACTAGGTGA

Peptide Sequence

PEP ID

Solyc07g064950.3.1
PEP Infomation

trigger factor type chaperone family protein (AHRD V3.3 *** AT5G55220.1)
Sequence

MATPISIQLNPSILSFPSNSTKAQFFQLNDKFLLKPNLSSRQFSSSLVASARLVAAAAAA
ASGVVETVEDKLPADLHVTETQEPNSRIRLTVEVPTVVCEDCYKQVIKEFMRRSKVPGFR
PGKNVPEDILVGFVGKQNIQNAVVEAILKRTLPHAMSSVTRNAYEDSIRIVTKFEDMEKT
YLSLNCLRYDVVVDVAPEIKWKPDDAYKNIKVAVELDSDMDAQRASEKELIRRHKSLGAL
KIVTDRGLQVGDVAVIDISATTIEQDGSDAKTIPAAESKGFNFDTEEGDNVLPGFRDSII
GIKRGETKSFPLVFPDSWKQEDLRGVHAQFTVACKELFYRDLPELNDAMAERLLPGCSSI
EEVKQALLQRCLEVEQAAKDQATDNAILDQLYKMVEVDIPQSLFQEQGRQLYGAQLLQLQ
ANMKLNEQQLASLSSPRAVNEFLETQKENIISIIKQNLAVGDIFTRENLQFSTEELVKEV
QNSIQEFQQHQQEYDEDRVKLQVQEVLEGAKVLEWLRENAEIQYITR*

Transcript Sequence

Transcript ID

Solyc07g064950.3.1
Transcript Infomation

trigger factor type chaperone family protein (AHRD V3.3 *** AT5G55220.1)
Sequence

GGGCAAAGAAAAAATATGAATTAAGTAAGTAATTATTATTTCTAATGTTATAAATTCTTA
CCTTATCCTATGTTGAAAATTGCTAAGGGGAGTAGTAGTGTTATCTTCATCACTTCTGCA
TTTCTTCTTACAACCTGAACAAAAGAAAAATGGCGACTCCAATTTCCATTCAATTGAATC
CTTCAATTCTCTCATTTCCATCAAATTCTACAAAAGCTCAATTTTTTCAACTCAATGATA
AATTCTTGCTTAAACCCAATTTATCTTCCCGCCAATTCTCCTCCTCCTTGGTGGCTTCAG
CTCGATTGGTGGCGGCGGCGGCAGCAGCAGCTTCTGGTGTTGTTGAAACTGTTGAAGATA
AACTTCCAGCTGATCTTCATGTTACTGAAACACAGGAACCCAATTCAAGAATCAGATTGA
CTGTAGAAGTTCCAACTGTTGTATGTGAGGATTGCTACAAACAAGTCATAAAAGAGTTCA
TGAGACGTTCAAAGGTTCCTGGATTTCGTCCAGGGAAGAATGTTCCAGAAGATATCCTTG
TTGGCTTTGTCGGGAAGCAAAATATTCAAAATGCTGTAGTTGAAGCTATTCTGAAAAGAA
CACTTCCACATGCCATGTCTTCGGTTACCCGGAACGCATATGAAGACTCCATCCGCATTG
TGACCAAATTTGAAGACATGGAAAAGACTTATCTGTCTCTGAATTGCTTGAGGTATGATG
TGGTTGTTGATGTGGCTCCTGAAATCAAGTGGAAACCTGACGATGCATACAAGAATATTA
AGGTGGCTGTTGAGCTTGACAGCGATATGGATGCTCAAAGAGCTTCAGAAAAAGAGTTGA
TACGGCGTCACAAGTCTCTGGGTGCATTAAAAATTGTTACTGATAGGGGTTTACAGGTTG
GCGATGTCGCAGTGATTGATATATCAGCAACTACGATTGAGCAAGATGGATCAGACGCTA
AAACCATACCAGCTGCAGAGAGTAAAGGTTTCAATTTTGATACAGAAGAGGGAGATAATG
TCCTTCCCGGATTTCGTGACTCAATTATTGGTATTAAACGAGGTGAAACGAAGTCATTCC
CTTTGGTATTTCCAGACTCATGGAAACAAGAAGATCTTCGTGGTGTTCATGCTCAATTCA
CTGTTGCATGTAAGGAACTGTTTTACAGAGATTTGCCCGAGTTGAATGACGCGATGGCTG
AAAGGCTTCTCCCAGGATGCAGCTCCATTGAGGAGGTCAAACAAGCGTTGCTACAAAGAT
GTCTTGAAGTCGAACAGGCAGCTAAAGACCAAGCAACTGATAATGCCATCCTTGACCAGC
TATACAAGATGGTTGAAGTTGATATTCCTCAATCTCTCTTCCAAGAGCAAGGAAGACAAC
TCTATGGAGCTCAACTTTTACAATTGCAGGCAAATATGAAACTGAACGAACAGCAGCTGG
CATCGTTATCAAGCCCCAGGGCTGTGAATGAGTTCCTTGAGACACAAAAAGAAAATATAA
TAAGTATCATAAAACAAAATTTAGCTGTTGGTGACATATTTACACGTGAAAATTTGCAGT
TTTCAACAGAGGAGCTAGTGAAGGAGGTTCAGAACTCAATTCAAGAATTCCAACAGCATC
AACAGGAGTACGATGAGGACCGAGTTAAGCTGCAGGTACAAGAGGTACTTGAAGGGGCTA
AAGTACTTGAATGGCTAAGGGAAAATGCAGAGATTCAGTACATAACTAGGTGAAAAGACA
ATAATGTTCAATGTTCACTGATAAGCTTCAACTTATGTTGATGCTTCTGAGAACTCCGTC
AACATTGGTGTTCCGGGAACTGATGTGATAAATGCTTCAAGCAAAATTTCCGCAGTATCA
ATTTTCCAGAACTTATATTGCTGCACGATTGTTGGCTCGAGATCTGCAAAATCTTGAGCA
TCTTTTTGACCTCCAAATTCAATTTCCAGGATGATGAATCGTCGCCTTTTTAGAGTTGGT
GAGCTGAAACTACACTTATTTTGAGAGGCACTCAATAGCTGTTTATTTGTGTACACTTTA
ACCAATTCATTTTCAAATTCAAATCTTCTGTTACCTAGTCTGAGTGTTTTTATGCTTGCC
TAGATTATGAGATTAAGCAATTTATTCCTTTGTTTTGGTTAATAAAATCATTTTAACTTC
CTTCTCAAGTCATCACTGTATTTGTCAGTATTTGAAGCACCTTATATTATTTAAGGTTGA
TCTTG