Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g064920.3.1
CDS Infomation

Upstream activation factor subunit spp27 (AHRD V3.3 *** A0A0B2NVJ3_GLYSO)
Sequence

ATGCTGCCACAGCGGATGAAAAAGGTTATGACAGACAACCCAAAGAAGTTAGCCAATTTG
ATTGACCTAGTAAATCTCCCTTCAACACTTAGAGAGTTCATGGGTCAGTCACAGACCTCC
CGCTTGGGTTGTTTTAAACGTGTCTGGTCTTACATCAAAGAAAACAATCTCCAGGATCCG
AACAACAAGAACTTGGTTAATTGCGATGAAAAGTTGAAGACTGTGTTGTTGGGTAAGCCC
CAGGTTGAGCTTACTGAACTGCCAACGCTGATCAAGTTGCACTTCCCCAAGCAACCAAGA
TGA

Peptide Sequence

PEP ID

Solyc07g064920.3.1
PEP Infomation

Upstream activation factor subunit spp27 (AHRD V3.3 *** A0A0B2NVJ3_GLYSO)
Sequence

MLPQRMKKVMTDNPKKLANLIDLVNLPSTLREFMGQSQTSRLGCFKRVWSYIKENNLQDP
NNKNLVNCDEKLKTVLLGKPQVELTELPTLIKLHFPKQPR*

Transcript Sequence

Transcript ID

Solyc07g064920.3.1
Transcript Infomation

Upstream activation factor subunit spp27 (AHRD V3.3 *** A0A0B2NVJ3_GLYSO)
Sequence

AAGATATGCGTATATCCTCTATTCTCAAATTCAACTTATCTTACTCGATAATATTATTGA
ATTGTCACAATCACTCGAGAAAGAAAATATATATAAAAAAATCTAATCAACTATAACAAA
TGGTATTTAGGCAAATAAATTGTATTAAGCCAACTAATACTTAGACGACCGAGCCCCTTG
CACAAAAAGGAATTGGCAGAACGGTGAGCACCAAATCGTTGCCCCAAAATTCCATTGCTG
ACGAGTGACGAGGGAAGCGAGAAGCTAACAAGATGCTGCCACAGCGGATGAAAAAGGTTA
TGACAGACAACCCAAAGAAGTTAGCCAATTTGATTGACCTAGTAAATCTCCCTTCAACAC
TTAGAGAGTTCATGGGTCAGTCACAGACCTCCCGCTTGGGTTGTTTTAAACGTGTCTGGT
CTTACATCAAAGAAAACAATCTCCAGGATCCGAACAACAAGAACTTGGTTAATTGCGATG
AAAAGTTGAAGACTGTGTTGTTGGGTAAGCCCCAGGTTGAGCTTACTGAACTGCCAACGC
TGATCAAGTTGCACTTCCCCAAGCAACCAAGATGATTGAGTTTATTGTAATGTTTAATCT
TAGTGCTTAATCTTCGAACACTATATAGACTCCACAGATTTTACGAAGAGTTAGTCTGAT
TAAGTATCCTGGTAAAATGACTTGTCTTATGAGTTACTAGTCAAAGCTCTACAAGCAGAA
GCAGCTCTATAGTTTTGCGTTTTGCCATATTTTACTTTCGTATTTTCGAAGATGCTACCC
TTTACTGTAGTGATGCTCTTTTTTTTTAACTTCTCTACCTTCACGAGATAGGAGTTAACT
CTATGTTGTCGTATATAAGTAAATTCACTTTGCAAGGTAGGAATAAGGTACGCATACATT
TTAACTTTTTGGACTTTTGAAATTACACGAGTTTGTTGTTGTTGCAACTTCTCCTTCAAC
AAAATTTCCCTAGAGAAGAAGTGATGTACAAACAAGCATTTGACAAAAAAATAAGAGCTC
AGATGTGCTAGTTTTAATCATCTAAATCAGACGATTGCAGAGACCCTTAATCACTGCTTA
ATGCAAATTTCTTCACAGCTCAGAGTGCACCAGCCGGGAATCGAACCAGGGTCTGTACCG
TGGCAGGGTACTATTCTACCACTAGACCACTGGTGCTTCATGTT