Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g064810.3.1
CDS Infomation

Imidazole glycerol phosphate synthase hisHF family protein (AHRD V3.3 *** B9GFE9_POPTR)
Sequence

ATGGAGGCGGCCAGTTTCACTTCTGCTTCATCAACGACGACACCGTTTTCATCTTATTCC
TCCACTTCTCAATCTCTTCGTTTCCTGCGTTACAAGCCTAATGCGAAACCTCTGAACTAC
AAATCTTCCAGAAGCTTCTCAGCCCGCGCTTCCGCCACCAGTGCCGATGATTCTGTGGTA
ACTCTACTTGATTATGGTGCTGGCAATGTGCGGAGTGTCAGGAATGCAATTAAATATCTC
GGTTTCGACATCAAAGATGTCCAAACACCACAGGACATTTTGAAAGCAAAACGACTCATT
TTTCCTGGGGTTGGTGCTTTTGCTCCTGCCATGGATGTGCTAAACAAGAAGGGAATGGCT
GAAGCACTTTGTGCTTACATTGAGCAAGATCGCCCATTCCTAGGCATTTGTCTTGGACTG
CAGCTACTTTTTGAGTCAAGTGAAGAAAATGGACAAGTAAAGGGTCTTGGTTTGATTCCT
GGAGTAGTTGGACGTTTTGACTCTTCTAAAGGGATCAGAGTACCTCACATTGGCTGGAAT
GCACTTGAAATAGCAAAAGATACTCAAATTTTGGATGACGTTGGAAATTCACATGTCTAT
TTCGTACATTCTTATCGGGCAATGCCGTCAGATGAAAATAGAGAGTGGATATCATCGACC
TGCAAGTATGGTGACGATTTCATAGCATCCATTCAGAGAGGAAATGTCCATGCCGTTCAG
TTTCATCCTGAGAAGAGCGGTGATGTTGGCCTTTCTGTATTGAGGAGGTTCTTGAATCCA
AAATCCGGGAGAACGCAGAAGCTGGTCCAAGGGAATGCCTCTAAACTTGCAAAGCGGGTT
ATTGCATGTCTTGATGTGAGGACAAATGATAAGGGTGACTTGGTTGTAACCAAAGGAGAC
CAATACGATGTTAGAGAGAATACAGAAGAAAATGAGGTGAGAAACCTTGGCAAGCCCGTG
GATCTTGCTGGACAGTATTACAAGGATGGGGCAGATGAGGTTAGCTTTTTAAATATTACT
GCTTTCCGAGACTTTCCCTTGGGTGATCTGCCAATGTTGCAGGTATTGAGGTATGCATCA
GAGAATGTTTTTGTGCCATTAACCGTTGGAGGTGGTATTAGAGACTTCAAAGATGCGAAT
GGCAGATACTACTCTAGTTTGGAAGTTGCTTCAGAATATTTTCGTTCTGGGGCAGACAAA
ATTTCTATTGGAAGTGATGCTGTTTATGCTGCGGAAGAATACTTGAAATCTGGAGTGAAA
ACTGGAAAGAGCAGTCTAGAGCAGATCTCCCGAGTTTATGGAAATCAGGCAGTAGTTGTA
AGCATTGATCCTCGAAGGGTGTATGTAAAGGACCCCAAGGCCGTGGAATTCAGGACTGTG
AAAGTGCGAAACCCAGGTCCAAATGGAGAAGAATATGCATGGTACCAGTGCACGGTGAGT
GGTGGGAGAGAAGGCCGCCCTATTGGAGCTTATGAGCTTGCGAAAGCTGTTGAGGAATTA
GGAGCTGGGGAGATACTGCTGAACTGCATTGATTGTGATGGTCAAGGAAAGGGATTTGAT
ATAGACCTAATTAAGTTGGTTTCAGATGCTGTAAGCATTCCTGTGATTGCAAGCAGTGGA
GCTGGAGCTGTTGAACACTTTACAGAGGTCTTCAGAGAAACAAATGCTTCTGCTGCCCTT
GCTGCTGGAATTTTCCATAGAAAGGAGGTTCCCATTCAAGCCGTGAAAGAGCACCTGTCA
GAGGAAGGCATAGAGGTTAGAATGTAA

Peptide Sequence

PEP ID

Solyc07g064810.3.1
PEP Infomation

Imidazole glycerol phosphate synthase hisHF family protein (AHRD V3.3 *** B9GFE9_POPTR)
Sequence

MEAASFTSASSTTTPFSSYSSTSQSLRFLRYKPNAKPLNYKSSRSFSARASATSADDSVV
TLLDYGAGNVRSVRNAIKYLGFDIKDVQTPQDILKAKRLIFPGVGAFAPAMDVLNKKGMA
EALCAYIEQDRPFLGICLGLQLLFESSEENGQVKGLGLIPGVVGRFDSSKGIRVPHIGWN
ALEIAKDTQILDDVGNSHVYFVHSYRAMPSDENREWISSTCKYGDDFIASIQRGNVHAVQ
FHPEKSGDVGLSVLRRFLNPKSGRTQKLVQGNASKLAKRVIACLDVRTNDKGDLVVTKGD
QYDVRENTEENEVRNLGKPVDLAGQYYKDGADEVSFLNITAFRDFPLGDLPMLQVLRYAS
ENVFVPLTVGGGIRDFKDANGRYYSSLEVASEYFRSGADKISIGSDAVYAAEEYLKSGVK
TGKSSLEQISRVYGNQAVVVSIDPRRVYVKDPKAVEFRTVKVRNPGPNGEEYAWYQCTVS
GGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDIDLIKLVSDAVSIPVIASSG
AGAVEHFTEVFRETNASAALAAGIFHRKEVPIQAVKEHLSEEGIEVRM*

Transcript Sequence

Transcript ID

Solyc07g064810.3.1
Transcript Infomation

Imidazole glycerol phosphate synthase hisHF family protein (AHRD V3.3 *** B9GFE9_POPTR)
Sequence

CTTTTATTACACTGATGAACCAGAAAGCTCGAAGAAGAGAAAATGGAGGCGGCCAGTTTC
ACTTCTGCTTCATCAACGACGACACCGTTTTCATCTTATTCCTCCACTTCTCAATCTCTT
CGTTTCCTGCGTTACAAGCCTAATGCGAAACCTCTGAACTACAAATCTTCCAGAAGCTTC
TCAGCCCGCGCTTCCGCCACCAGTGCCGATGATTCTGTGGTAACTCTACTTGATTATGGT
GCTGGCAATGTGCGGAGTGTCAGGAATGCAATTAAATATCTCGGTTTCGACATCAAAGAT
GTCCAAACACCACAGGACATTTTGAAAGCAAAACGACTCATTTTTCCTGGGGTTGGTGCT
TTTGCTCCTGCCATGGATGTGCTAAACAAGAAGGGAATGGCTGAAGCACTTTGTGCTTAC
ATTGAGCAAGATCGCCCATTCCTAGGCATTTGTCTTGGACTGCAGCTACTTTTTGAGTCA
AGTGAAGAAAATGGACAAGTAAAGGGTCTTGGTTTGATTCCTGGAGTAGTTGGACGTTTT
GACTCTTCTAAAGGGATCAGAGTACCTCACATTGGCTGGAATGCACTTGAAATAGCAAAA
GATACTCAAATTTTGGATGACGTTGGAAATTCACATGTCTATTTCGTACATTCTTATCGG
GCAATGCCGTCAGATGAAAATAGAGAGTGGATATCATCGACCTGCAAGTATGGTGACGAT
TTCATAGCATCCATTCAGAGAGGAAATGTCCATGCCGTTCAGTTTCATCCTGAGAAGAGC
GGTGATGTTGGCCTTTCTGTATTGAGGAGGTTCTTGAATCCAAAATCCGGGAGAACGCAG
AAGCTGGTCCAAGGGAATGCCTCTAAACTTGCAAAGCGGGTTATTGCATGTCTTGATGTG
AGGACAAATGATAAGGGTGACTTGGTTGTAACCAAAGGAGACCAATACGATGTTAGAGAG
AATACAGAAGAAAATGAGGTGAGAAACCTTGGCAAGCCCGTGGATCTTGCTGGACAGTAT
TACAAGGATGGGGCAGATGAGGTTAGCTTTTTAAATATTACTGCTTTCCGAGACTTTCCC
TTGGGTGATCTGCCAATGTTGCAGGTATTGAGGTATGCATCAGAGAATGTTTTTGTGCCA
TTAACCGTTGGAGGTGGTATTAGAGACTTCAAAGATGCGAATGGCAGATACTACTCTAGT
TTGGAAGTTGCTTCAGAATATTTTCGTTCTGGGGCAGACAAAATTTCTATTGGAAGTGAT
GCTGTTTATGCTGCGGAAGAATACTTGAAATCTGGAGTGAAAACTGGAAAGAGCAGTCTA
GAGCAGATCTCCCGAGTTTATGGAAATCAGGCAGTAGTTGTAAGCATTGATCCTCGAAGG
GTGTATGTAAAGGACCCCAAGGCCGTGGAATTCAGGACTGTGAAAGTGCGAAACCCAGGT
CCAAATGGAGAAGAATATGCATGGTACCAGTGCACGGTGAGTGGTGGGAGAGAAGGCCGC
CCTATTGGAGCTTATGAGCTTGCGAAAGCTGTTGAGGAATTAGGAGCTGGGGAGATACTG
CTGAACTGCATTGATTGTGATGGTCAAGGAAAGGGATTTGATATAGACCTAATTAAGTTG
GTTTCAGATGCTGTAAGCATTCCTGTGATTGCAAGCAGTGGAGCTGGAGCTGTTGAACAC
TTTACAGAGGTCTTCAGAGAAACAAATGCTTCTGCTGCCCTTGCTGCTGGAATTTTCCAT
AGAAAGGAGGTTCCCATTCAAGCCGTGAAAGAGCACCTGTCAGAGGAAGGCATAGAGGTT
AGAATGTAACCACATTTTTGCTATCGAGCAACTCGATATGCAGTCCTATCCTTTGCCATT
CCTTGTTACTTGATGTTTATATCACTGAATATCAGTTTCTTTTATCTTGTTGCTGCGAAC
GAAGCCTTTTTCAATATCTTGCACTTATAGCCTCGTGCCAATTTTGAGCAAGTTATCATT
GTAAAATTGTGTTGTTAAATTATTTGTGTACACTTTCTTCAGTATATGGGTTATTAGTTG
GACATGTCTTGGGGTATTAGTTCTTGAGTATCATCGTGAATGATGAATATACATTTTGTT
GAACAAAGTTCACAAATTTCTTTGCTGATATCATTTTCCTATTTGATTTGTATATTCTTA
ACTCCTAGCAAATCAACATTGTTCATGAACGCATCT