Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g064740.3.1
CDS Infomation

Rab3 GTPase-activating protein catalytic subunit (AHRD V3.3 *** AT5G55060.1)
Sequence

ATGGAGGCGTCATTCGTATCTAGAGCAAAGACGGCCTTCCATTCTGCGGCAGCTAAAGCG
GAGAAAGTTTTCACCGATATCAAAAAATCTGATCTCATCAACGATCGAGATTCGGATAAA
CAATCGCCGGTGACGTCAACGAACGAGATTTCAGACGATAAGGACGATTCTAAGGACGAA
AAGAATTCAAGGCAGAGGCCTCCACCAATAAAGGCCAAGCAGGACTGGCAGGAGAGGTTT
AAGAACATTAGAATAGGAAAAAGAGGAACTGAAGGCACTGACAAAGCTGCAAGTCCAGGA
ATGGCATATGCAATTTTTGATGATAATATTTGCTTCACGAGTGAGAGAGAAATACCTGAT
TCAAAGGACTCTGAATCAGGTTTGACGGTGGAAGAGTCAAAACATCGGGACAGAGATGTC
ATTCCTCCAGCCTCTGTCATGAAGCAATTAGCTGTAGCTGTTGAGGCTGGAAAGAGGTGT
AGTACAATGAAAGACTTCCTAGCTTCATCCAGAGGTTCCTCACCCATCATGGAGAGGGCT
AGCTTAAGCTTGTCAGCAGTGAAGTCATTAGTGCTACGTGAAAAAGATGACAAATTTGCG
GGTGAATTTGGTGCAGATGACAAGGTCTTGTCTCTTATCAATTTACTGCTAGATGCAGGA
CATTTTGCTGGAAGGAAGGTTGATTCTGCAAATGCTTCATCTTTGCCTAAGGATCTTCAT
GGTGCTCCTCCTGAAAGTTTTATCACTAATCTTGCTGATGTAACTGGACGCATGAAATCA
TTGCGTAAAATGGCATTATTATGGTGCAAAATTGTTGCTGAATTACGGAGGCTGTGGTCT
GAAGGACAATATATCCCTGGCATTCCTCCAGATCAAATCCCGGACCTGAATTCATGTCTT
TTGTATCAGCAACTCCAGGTTATTAACTGTTGCATTTCCAGAAAAAAGCGACGCATTGCA
GCCACTGAATCGTTGGATTCGGCTGTCAGGCTAGGAAGTTCAAAAACAGATGTTCTTGCT
GATGACGGCACCCTTCCTGCAACTCCTGTCTTGTATGCTAAAGTTAACACTGGAGAATTA
ATTCTTCGGCTAGGAATGGACAGCAAATCTGATCTAAGAATGCTGGAAACGGGTGAACCT
ATATATACGCCAATAATGCAGGAAGAACCTTTGCTAACGGAAGATCTAATTAAAGAAACA
GAGGAGCTGGTGCTCCGAACTGGGAGTCTTGGAGCTGGGTGCTCTCAACTCCTATCTGAC
ATGCAGGCTTTCAAGGCAGCAAACCCTGGGTGTATATTAGAAGATTTCGTTAGATGGCAT
TCTCCTCCTGATTGGATGGAATGTGATACAATTGATGGAATTAATGAAACCCCTGATGCT
AATGACTCATTGTCTGGAAGAGGCCAACTGAGTACTCGAATGCAGAAAGAAGGCAACTTG
TGGCGCGAACTATGGGAAACCTCAAAGCCAGTGCCGGCTGTTAGACAAACTCCTCTCTTT
GATGAGGATTTGGCAGTGGAAAGTATTCTGGATAATTTAGAAGATATATCTCCACATGAG
CTTTTCAAGCAGCTGTTTATATCTCTTTTGGGATCAGGGTTTATAACTGCTGAGGCCACC
CTCTCAAACAATTCAAATTTAGTGAAGCTGTTCAGTGATTGTAAAGAATATGTCATTCTC
ACCTGTCAAAGAAGCAACTGGGTTGACAAAGTTGACGAATTGTGCCAGGTCTACGAGACT
GTTGAGACAATGGTACTCAGCCCAGATGAAGTTATAAGGATCACCTTTCAACCTGAAGAA
CCTTCAGCTGCACCCGCGAATGAACTAAAAAGTCGATTCAAAAGGCTTAGCCTCATATTC
AGAAACAAGGATAAGCTATCACCGCGAGACCAGAAGAACCAGGAGGAGAGTCCATTACGC
CAACCATTCTCATCCATATTTTCAAAGAAACCTCCAAAGCCCGACAGTTCATCTCCAGAT
AAACCTGTTACTTCCGTCGAAAATGACTGGACAATTGTATAA

Peptide Sequence

PEP ID

Solyc07g064740.3.1
PEP Infomation

Rab3 GTPase-activating protein catalytic subunit (AHRD V3.3 *** AT5G55060.1)
Sequence

MEASFVSRAKTAFHSAAAKAEKVFTDIKKSDLINDRDSDKQSPVTSTNEISDDKDDSKDE
KNSRQRPPPIKAKQDWQERFKNIRIGKRGTEGTDKAASPGMAYAIFDDNICFTSEREIPD
SKDSESGLTVEESKHRDRDVIPPASVMKQLAVAVEAGKRCSTMKDFLASSRGSSPIMERA
SLSLSAVKSLVLREKDDKFAGEFGADDKVLSLINLLLDAGHFAGRKVDSANASSLPKDLH
GAPPESFITNLADVTGRMKSLRKMALLWCKIVAELRRLWSEGQYIPGIPPDQIPDLNSCL
LYQQLQVINCCISRKKRRIAATESLDSAVRLGSSKTDVLADDGTLPATPVLYAKVNTGEL
ILRLGMDSKSDLRMLETGEPIYTPIMQEEPLLTEDLIKETEELVLRTGSLGAGCSQLLSD
MQAFKAANPGCILEDFVRWHSPPDWMECDTIDGINETPDANDSLSGRGQLSTRMQKEGNL
WRELWETSKPVPAVRQTPLFDEDLAVESILDNLEDISPHELFKQLFISLLGSGFITAEAT
LSNNSNLVKLFSDCKEYVILTCQRSNWVDKVDELCQVYETVETMVLSPDEVIRITFQPEE
PSAAPANELKSRFKRLSLIFRNKDKLSPRDQKNQEESPLRQPFSSIFSKKPPKPDSSSPD
KPVTSVENDWTIV*

Transcript Sequence

Transcript ID

Solyc07g064740.3.1
Transcript Infomation

Rab3 GTPase-activating protein catalytic subunit (AHRD V3.3 *** AT5G55060.1)
Sequence

GCAGAAAATGATAAGCATTATCAATATTCTCTAAAATTTGACAAACGCCGTCTACGGATT
AGCGTGTTTGACTCCCATTGATTTTATTTGTTCCCTCCATAAATCCATCAATTTTCCGAC
GAACTCGGCGGAGGAAATGGAGGCGTCATTCGTATCTAGAGCAAAGACGGCCTTCCATTC
TGCGGCAGCTAAAGCGGAGAAAGTTTTCACCGATATCAAAAAATCTGATCTCATCAACGA
TCGAGATTCGGATAAACAATCGCCGGTGACGTCAACGAACGAGATTTCAGACGATAAGGA
CGATTCTAAGGACGAAAAGAATTCAAGGCAGAGGCCTCCACCAATAAAGGCCAAGCAGGA
CTGGCAGGAGAGGTTTAAGAACATTAGAATAGGAAAAAGAGGAACTGAAGGCACTGACAA
AGCTGCAAGTCCAGGAATGGCATATGCAATTTTTGATGATAATATTTGCTTCACGAGTGA
GAGAGAAATACCTGATTCAAAGGACTCTGAATCAGGTTTGACGGTGGAAGAGTCAAAACA
TCGGGACAGAGATGTCATTCCTCCAGCCTCTGTCATGAAGCAATTAGCTGTAGCTGTTGA
GGCTGGAAAGAGGTGTAGTACAATGAAAGACTTCCTAGCTTCATCCAGAGGTTCCTCACC
CATCATGGAGAGGGCTAGCTTAAGCTTGTCAGCAGTGAAGTCATTAGTGCTACGTGAAAA
AGATGACAAATTTGCGGGTGAATTTGGTGCAGATGACAAGGTCTTGTCTCTTATCAATTT
ACTGCTAGATGCAGGACATTTTGCTGGAAGGAAGGTTGATTCTGCAAATGCTTCATCTTT
GCCTAAGGATCTTCATGGTGCTCCTCCTGAAAGTTTTATCACTAATCTTGCTGATGTAAC
TGGACGCATGAAATCATTGCGTAAAATGGCATTATTATGGTGCAAAATTGTTGCTGAATT
ACGGAGGCTGTGGTCTGAAGGACAATATATCCCTGGCATTCCTCCAGATCAAATCCCGGA
CCTGAATTCATGTCTTTTGTATCAGCAACTCCAGGTTATTAACTGTTGCATTTCCAGAAA
AAAGCGACGCATTGCAGCCACTGAATCGTTGGATTCGGCTGTCAGGCTAGGAAGTTCAAA
AACAGATGTTCTTGCTGATGACGGCACCCTTCCTGCAACTCCTGTCTTGTATGCTAAAGT
TAACACTGGAGAATTAATTCTTCGGCTAGGAATGGACAGCAAATCTGATCTAAGAATGCT
GGAAACGGGTGAACCTATATATACGCCAATAATGCAGGAAGAACCTTTGCTAACGGAAGA
TCTAATTAAAGAAACAGAGGAGCTGGTGCTCCGAACTGGGAGTCTTGGAGCTGGGTGCTC
TCAACTCCTATCTGACATGCAGGCTTTCAAGGCAGCAAACCCTGGGTGTATATTAGAAGA
TTTCGTTAGATGGCATTCTCCTCCTGATTGGATGGAATGTGATACAATTGATGGAATTAA
TGAAACCCCTGATGCTAATGACTCATTGTCTGGAAGAGGCCAACTGAGTACTCGAATGCA
GAAAGAAGGCAACTTGTGGCGCGAACTATGGGAAACCTCAAAGCCAGTGCCGGCTGTTAG
ACAAACTCCTCTCTTTGATGAGGATTTGGCAGTGGAAAGTATTCTGGATAATTTAGAAGA
TATATCTCCACATGAGCTTTTCAAGCAGCTGTTTATATCTCTTTTGGGATCAGGGTTTAT
AACTGCTGAGGCCACCCTCTCAAACAATTCAAATTTAGTGAAGCTGTTCAGTGATTGTAA
AGAATATGTCATTCTCACCTGTCAAAGAAGCAACTGGGTTGACAAAGTTGACGAATTGTG
CCAGGTCTACGAGACTGTTGAGACAATGGTACTCAGCCCAGATGAAGTTATAAGGATCAC
CTTTCAACCTGAAGAACCTTCAGCTGCACCCGCGAATGAACTAAAAAGTCGATTCAAAAG
GCTTAGCCTCATATTCAGAAACAAGGATAAGCTATCACCGCGAGACCAGAAGAACCAGGA
GGAGAGTCCATTACGCCAACCATTCTCATCCATATTTTCAAAGAAACCTCCAAAGCCCGA
CAGTTCATCTCCAGATAAACCTGTTACTTCCGTCGAAAATGACTGGACAATTGTATAATC
ACAGTTTTTTATTGTTGTTCATTGTGTAACTATAAATATATGTTACTAGTTTAGGCAGAG
ACCCGATGAATATTCCAGCATTGTGAGTTTCAGCTGATGCTTGTGACGAAACAGTTTATG
GAAGAACCTTAGAGTATTTTATATGATGGAAATTATTTTTCATGAAAAACATTTTTCCTC
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