Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g064550.3.1
CDS Infomation

Ataxin-2 (AHRD V3.3 *** A0A0B0NEZ9_GOSAR)
Sequence

ATGGGTTACAAAAAAGGAGGAAGATTCATGGCGGAAGAGGAGAACGGCGTCGGTGCTACA
CTGAGAGATGCTTTGTTATTTACTACTATGTGTATTGTTGGGCTACCGGTTAATGTTTAT
ATCAAAGATGGTGGTGTTTATTCGGGTATTTTTCACACTGCTTGTGTAGATGATGAATAT
GCTATTGTTTTGAAGAGGGCGAAGATGATTAAGAAGGGTAGTCGAGAGGCGAATGTAGCA
CGTGGAAGTTTGATAGAGACACTCGTAATTCTGTCTGAAGATCTTGTCCAAGTTGTCGCA
AAGGGGGTTATGCTATCTGCTGATTGTATTCAAGGACATTTAGATGGGGATAATGCAAGA
ACTGTTTGTAGCAATATAACTTATCCTGAATACACCAAAAAGGAGATGAAAGCAACAAAG
TCCAAGGTGTCTACCGTGGATGGAGAGAAAGCTAGTAAAGAAAGATATGTCCGAAATGGC
TTAATCAGTAAGCAAAGTGATCGCAGAGAGAGCCATGAGTCTCTAAGGGAGAGAACTATC
CGTGAAGTTCAAGGGTCAAGCTCAAATGTGGATGTTTCTGTTACTCAAGCAAGTCACCTT
GAGAATGTTACCTTCATGAAAAACTTGGAGTTGTCATCAAATGGAATATGTAATGGTAGT
CCTCCTCTTTCCTCAACCAAACTTGATGATCCGAACAATGATAGGCACAGTCATGAGCAG
CAGACTCTAGGCAAAACTCCTTGTTTGGGCGCTACTTCCTCTGGTGCTCCAATCACCTCA
GTCTCATGCGTCAGCTCATCATCAGCTCCAGCTGATTTGGTGCCTTCACGAGGTTCAATT
CATAATGTTAGTACAAAGGAATCTAAGCTCAACCCTGGGGCAAAGATATTTTCTCCATCG
ACTTTGCAGCATAGAACTGTTACACCTCCTGTGGTGCCAACGATGGCTTACGTGCCAGAT
TCCTGTCCTGTAGTACCTATTGTTACAGCAGAGCCTGCAGTTGAAATTACCCCCTTTGCT
CCTCATTCATCTGTGCCTGTCAAGTTTGTCCCATATAATAACTTGGCAGCTGGAAATGGT
GGCTTGGATGTACAGTATGCTCAACCGACAATTGGATACATGGGAAGCAGGACTCAGCCG
GCAAGGTATGGCAGTCAGTATCATCACCTTCAGGCTGCAACTGGTTATGTGCATCCAAAT
TCTCAAAATGTTATGGTTGGACGGTTGGGACCACTTGTTTATATGCATCATCCTGTTTCT
CATGACATTGTTCAGAGTGCAGCGGGGTTCCCTCAAGTATCCACACGTCCTGTATTAATT
CCACATCAGGTCCATCCTCCTAAGCATCAAGGAAGTACAGCACCACAAGCACTGCAGTTG
TATATGGCTCCCCCAGTTATAACAGGGCTACAACAACCATTCACTATCCCAAGCATTCCT
ATTACACAGTCGTCTTTTCCTGTTATGCGGCCTATGCAATTCCCAGTACCTAATGGTTTT
GTGCCTAACAAGTTCGCGTGA

Peptide Sequence

PEP ID

Solyc07g064550.3.1
PEP Infomation

Ataxin-2 (AHRD V3.3 *** A0A0B0NEZ9_GOSAR)
Sequence

MGYKKGGRFMAEEENGVGATLRDALLFTTMCIVGLPVNVYIKDGGVYSGIFHTACVDDEY
AIVLKRAKMIKKGSREANVARGSLIETLVILSEDLVQVVAKGVMLSADCIQGHLDGDNAR
TVCSNITYPEYTKKEMKATKSKVSTVDGEKASKERYVRNGLISKQSDRRESHESLRERTI
REVQGSSSNVDVSVTQASHLENVTFMKNLELSSNGICNGSPPLSSTKLDDPNNDRHSHEQ
QTLGKTPCLGATSSGAPITSVSCVSSSSAPADLVPSRGSIHNVSTKESKLNPGAKIFSPS
TLQHRTVTPPVVPTMAYVPDSCPVVPIVTAEPAVEITPFAPHSSVPVKFVPYNNLAAGNG
GLDVQYAQPTIGYMGSRTQPARYGSQYHHLQAATGYVHPNSQNVMVGRLGPLVYMHHPVS
HDIVQSAAGFPQVSTRPVLIPHQVHPPKHQGSTAPQALQLYMAPPVITGLQQPFTIPSIP
ITQSSFPVMRPMQFPVPNGFVPNKFA*

Transcript Sequence

Transcript ID

Solyc07g064550.3.1
Transcript Infomation

Ataxin-2 (AHRD V3.3 *** A0A0B0NEZ9_GOSAR)
Sequence

AGATCGAACGGAGCATTTTATTATTGTTTTATATTAGACAAGGGCAAATTCGAAACAAAC
AAATATCAATAAGCCAATAGTAGATATATTATAAATTTCAAGGGCATCTAAGCAACAAAC
CAATTACAAATATATAGGTACTTCTTCGTCTTCCTTTCTATACGTTCGATTCAATTTCTT
ATTATTTTTTTTCATCACATAATAATAATATCAGCAAATTTCTACAAAAATCAACAATTT
TTTCTTCAGATTTCTTTGCGATTTCAAGATACATATTATACAGGATTTATACAAATCAAT
ATACTGAGATATACATCTGTTATTGTAGAGTTTTTCAAGTGCCAGGAAGTGAGCTATGGG
TTACAAAAAAGGAGGAAGATTCATGGCGGAAGAGGAGAACGGCGTCGGTGCTACACTGAG
AGATGCTTTGTTATTTACTACTATGTGTATTGTTGGGCTACCGGTTAATGTTTATATCAA
AGATGGTGGTGTTTATTCGGGTATTTTTCACACTGCTTGTGTAGATGATGAATATGCTAT
TGTTTTGAAGAGGGCGAAGATGATTAAGAAGGGTAGTCGAGAGGCGAATGTAGCACGTGG
AAGTTTGATAGAGACACTCGTAATTCTGTCTGAAGATCTTGTCCAAGTTGTCGCAAAGGG
GGTTATGCTATCTGCTGATTGTATTCAAGGACATTTAGATGGGGATAATGCAAGAACTGT
TTGTAGCAATATAACTTATCCTGAATACACCAAAAAGGAGATGAAAGCAACAAAGTCCAA
GGTGTCTACCGTGGATGGAGAGAAAGCTAGTAAAGAAAGATATGTCCGAAATGGCTTAAT
CAGTAAGCAAAGTGATCGCAGAGAGAGCCATGAGTCTCTAAGGGAGAGAACTATCCGTGA
AGTTCAAGGGTCAAGCTCAAATGTGGATGTTTCTGTTACTCAAGCAAGTCACCTTGAGAA
TGTTACCTTCATGAAAAACTTGGAGTTGTCATCAAATGGAATATGTAATGGTAGTCCTCC
TCTTTCCTCAACCAAACTTGATGATCCGAACAATGATAGGCACAGTCATGAGCAGCAGAC
TCTAGGCAAAACTCCTTGTTTGGGCGCTACTTCCTCTGGTGCTCCAATCACCTCAGTCTC
ATGCGTCAGCTCATCATCAGCTCCAGCTGATTTGGTGCCTTCACGAGGTTCAATTCATAA
TGTTAGTACAAAGGAATCTAAGCTCAACCCTGGGGCAAAGATATTTTCTCCATCGACTTT
GCAGCATAGAACTGTTACACCTCCTGTGGTGCCAACGATGGCTTACGTGCCAGATTCCTG
TCCTGTAGTACCTATTGTTACAGCAGAGCCTGCAGTTGAAATTACCCCCTTTGCTCCTCA
TTCATCTGTGCCTGTCAAGTTTGTCCCATATAATAACTTGGCAGCTGGAAATGGTGGCTT
GGATGTACAGTATGCTCAACCGACAATTGGATACATGGGAAGCAGGACTCAGCCGGCAAG
GTATGGCAGTCAGTATCATCACCTTCAGGCTGCAACTGGTTATGTGCATCCAAATTCTCA
AAATGTTATGGTTGGACGGTTGGGACCACTTGTTTATATGCATCATCCTGTTTCTCATGA
CATTGTTCAGAGTGCAGCGGGGTTCCCTCAAGTATCCACACGTCCTGTATTAATTCCACA
TCAGGTCCATCCTCCTAAGCATCAAGGAAGTACAGCACCACAAGCACTGCAGTTGTATAT
GGCTCCCCCAGTTATAACAGGGCTACAACAACCATTCACTATCCCAAGCATTCCTATTAC
ACAGTCGTCTTTTCCTGTTATGCGGCCTATGCAATTCCCAGTACCTAATGGTTTTGTGCC
TAACAAGTTCGCGTGAATATACTTCTGTAGTTGAAATGATGCCTGCCTATTGAGATTCCT
TTTTCGTTTCTTCTCAATGTCTGGCAGCATGATTCTTTTCTAAAGTTTTCGATCTTGTAG
TATGAGCAGGTTATTCTTTGTTAGGGAGAGGCATTAACATTGTATATTGAGTTACGCATG
AAGTTGTTTTTGTTTGGAGGTAGAGGAAGAGTTCACTCGGGCGGTTCTTGTTTTGGTTGT
GATATCCAAAGGAGATGGATTTTCCGTTTTGAACTGCAGCAACACAAATTTTTGGGCGTC
GAAAAGTTGCACTTTTTGTATGATACACTAAGCTTGAAACTAATAGCTTTGTTATAGCTC
TTTAAGTTTGATGCATTACGCTAATATGGATTTGGTTTATCAAAAACTATCATATATTGA
ACTATTTATTGTAAGAATTTTTTCCACGTTTCATTTTCAGTGTCAAAGTTATATTTTGAC
CAAAGCCATTTCTTGGATTCAATTGTATACTATTCTAAGATAGGTCCTAATCTTTTTTGA
TAAAAAATTGCTGTAATGTTATTGGTGTCCATTCTATAACATGTTAGTTTGGTGAATATC
GAAATCAAGTATATTCATGATGAACCAAAAAAGAAAGTATTTGAGTAATTCTGTTAAAAA
CATGTTCATGTACATCAAGATATACTCTGTGTAATCTCACAAAAGTATCTGAGTAATCCT
GTGAAAAATATGTTCATGCACATCAAGATATGCTATGTGTAATCTCCCAAGTATGTCTCG
AAAGGAGAAATATCTGAGTAATCCTATTAAAAACATGTTCATGCACATCAAGATATGCTC
GGTGTAATCTCACAAGTATGTCTCGAAAGGAGAAGTATCTTAGTAATCCCGTTAAAATCA
TGTTCATGCACATTAAGATATACTCGGTGCAATCTCACAAGTATGTCTCGAAAGGAGAAG
TATCTGAGTAATCCTGTTAAATACATGTTCATGCACATCAAGATATACTTTTTTTAATCT
CACAAGTACGTTTCAAAAAGATAAAGGGTACGTAGATTATATTCAAGATGAACCAAAAAA
GGAACTATCTGAGTAATCATGTTAAAAACATGTTCATGCACATCAAAATATGCTTGGTGT
AATTTCACAAGTATGTCTCGAAAGGAGAAGTATCTGAATAATACTGTTAAAAACATGTTC
ATGCACATCAAGATATGCTCGGTGTACTCTCACAAGTATGTCTCGAAAGGAGAAGAAAGG
AGAAGTATTTGAGTAATTTATGTTAAAAACATGTTCATGCACATCAAGATATACTCCTTG
TAATCTCACAAGTATGTCTCGAAAAGATAGAGGGTATGCATATTATATTCAAGATGAACC
AAAAAAGGAAGTATCTGAATAATCCTGTTAAAAACATGTTCATGCACATCAAAGATAGAG
GGTATGCAAATTATATTCGAGATGAACCAAAAAAGGAAGTATCTGAGTGATCTTGTTTAA
AACATGTTCATGCACATCAAGATATACTCTATGTAATCTCACAAGTATGTCTCAAAAGGA
TAGAGGGGGTATGCAAAAGTATATTCAAGATGAACCAAAAAAGAAAGGATAGAGGGTATG
CAAAGTATATTCGAGATGAACCAAAAAAGGAAGTATATGTGTATTCATGTTAAAAACATG
CTCATGCACATCAAGAT