Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g064190.3.1
CDS Infomation

pectin methylesterase LePME3
Sequence

ATGACAGAGTTACAAACTTCTAAAAGAATGGCTACTCCTCTACAACCTTTCTTAACAAAA
ACACACAAACAAAATCCCATAATCGGCTTCAATATCCTCACTTTTGTTGTAACTTTGTTT
GTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGATTAAACATTCT
AATCTGTGTAAAAGTGCACAAGGTTCCCAACTCTGCCTTAGTTATGTCTCTGAAATTGTC
ACAACAGAATCAGATGGAGTAACTGTTCTGAAGAAATTTCTAGTTAAATATGTCCATCAA
ATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATGACATTCGTCAA
CACGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCAGTCAGTTGATTTAGTATCTGAT
TCAATTGCAGCAATTGATAAAAGAAGTCGTTTGGAGCATGCCAATGTGCAAAGTTGGCTA
AGTGGTGTGCTTACAAACCACGTTACGTGTTTAGATGAGCTTACTTCGTTAAGTACTAAG
AATGGAACGGTTCTTGATGAGTTGATCACGAGAGCTAAGGTAGCATTGGCGATGCTTGCA
TCCGTGACAACTCCAAATGATGAAGTTTTGAGGCAGGGTTTAGGAAAAATGCCATATTGG
GTGAGTTCGAGGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGACATTATAGCGAATGCA
GTGGTGGCACAAGATGGAACGGGGGATTATCAAACACTTGCTGAAGCTGTTGATGCTGCA
CCAGATAAGAATAAGACGCGTTATGTAATTTATGTAAAGATGGGAATTTATAAAGAGAAT
GTTGTGGTGACTAAGAAAAAAATGAACTTAATGATTGTTGGTGATGGCATGAATGCTACC
ATCATTACTGGTAGCCTTAATGTTGTCGATGGATCAACAACCTTCCGCTCTGCCACTCTT
GCTGCAGTTGGCCAAGGATTTATACTACAGGACTTATGTATACAGAACACAGCAGGGCCA
GAGAAAGGCCAAGCAGTGGCACTTCGAGTTGGAGCTGATATGTCTGTCATAAATCGTTGT
CGTATTGATGCTTATCAAGACACCCTATATGCACATTCTCAAAGGCAATTCTATCGAGAC
TCCTACGTGACAGGTACTGTTGATTTCATATTTGGTAATGCAGCAGTTGTATTCCAGAAA
TGTCAGATCGTAGCTAGAAAACCGAATAAAAGACAGAAAAACATGGTGACTGCACAAGGC
AGGACGGACCCAAATCAGGCCACGGGGACATCAATTCAGTTCTGTGACATAATTGCAAGT
CCGGACCTTGAACCAGTCATGAATGAATACAAAACATATCTTGGTAGGCCATGGAAAAAA
CATTCAAGAACGGTAGTGATGCAATCATACCTAGATGGTCATATTGATCCATCAGGTTGG
TTTGAATGGCGCGGAGATTTTGCATTGAAGACATTGTATTATGGTGAATATATGAACAAT
GGACCTGGTGCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGTTATCATGTCATTACTGAT
CCCAATGAGGCTATGCCGTTCACTGTGGCTGAGCTGATTCAGGGCGGATCATGGTTGAAT
TCGACTAGCGTGGCATATGTGGAAGGATTAGTTGAGTAG

Peptide Sequence

PEP ID

Solyc07g064190.3.1
PEP Infomation

pectin methylesterase LePME3
Sequence

MTELQTSKRMATPLQPFLTKTHKQNPIIGFNILTFVVTLFVALFLVVFLVAPYQFEIKHS
NLCKSAQGSQLCLSYVSEIVTTESDGVTVLKKFLVKYVHQMNNAIPVVRKIKNQINDIRQ
HGALTDCLELLDQSVDLVSDSIAAIDKRSRLEHANVQSWLSGVLTNHVTCLDELTSLSTK
NGTVLDELITRAKVALAMLASVTTPNDEVLRQGLGKMPYWVSSRDRKLMESSGKDIIANA
VVAQDGTGDYQTLAEAVDAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNAT
IITGSLNVVDGSTTFRSATLAAVGQGFILQDLCIQNTAGPEKGQAVALRVGADMSVINRC
RIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQG
RTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGW
FEWRGDFALKTLYYGEYMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLN
STSVAYVEGLVE*

Transcript Sequence

Transcript ID

Solyc07g064190.3.1
Transcript Infomation

pectin methylesterase LePME3
Sequence

ACTTTGGACTAAGTAAGTTAAGTCACATCAATTCTCCCTCTTTTGTCAAATTTATCATAT
TACTGGCAAGAAAACTTTTGCGAGTATTTTCAAGCATTCATTATTATATACGTTAGAGTT
AAACCACCTAAAATACGTCAGCGTATATGAATTACACATATTTTAAGTGAGTATTCCAAA
ACATCCAACACATGACAGAGTTACAAACTTCTAAAAGAATGGCTACTCCTCTACAACCTT
TCTTAACAAAAACACACAAACAAAATCCCATAATCGGCTTCAATATCCTCACTTTTGTTG
TAACTTTGTTTGTTGCTCTCTTCTTAGTTGTGTTTCTTGTTGCTCCATATCAATTTGAGA
TTAAACATTCTAATCTGTGTAAAAGTGCACAAGGTTCCCAACTCTGCCTTAGTTATGTCT
CTGAAATTGTCACAACAGAATCAGATGGAGTAACTGTTCTGAAGAAATTTCTAGTTAAAT
ATGTCCATCAAATGAACAATGCAATTCCAGTGGTTCGCAAAATCAAGAATCAGATCAATG
ACATTCGTCAACACGGGGCTTTAACTGATTGTCTTGAGCTTCTTGATCAGTCAGTTGATT
TAGTATCTGATTCAATTGCAGCAATTGATAAAAGAAGTCGTTTGGAGCATGCCAATGTGC
AAAGTTGGCTAAGTGGTGTGCTTACAAACCACGTTACGTGTTTAGATGAGCTTACTTCGT
TAAGTACTAAGAATGGAACGGTTCTTGATGAGTTGATCACGAGAGCTAAGGTAGCATTGG
CGATGCTTGCATCCGTGACAACTCCAAATGATGAAGTTTTGAGGCAGGGTTTAGGAAAAA
TGCCATATTGGGTGAGTTCGAGGGATAGGAAGCTGATGGAGAGTTCGGGTAAGGACATTA
TAGCGAATGCAGTGGTGGCACAAGATGGAACGGGGGATTATCAAACACTTGCTGAAGCTG
TTGATGCTGCACCAGATAAGAATAAGACGCGTTATGTAATTTATGTAAAGATGGGAATTT
ATAAAGAGAATGTTGTGGTGACTAAGAAAAAAATGAACTTAATGATTGTTGGTGATGGCA
TGAATGCTACCATCATTACTGGTAGCCTTAATGTTGTCGATGGATCAACAACCTTCCGCT
CTGCCACTCTTGCTGCAGTTGGCCAAGGATTTATACTACAGGACTTATGTATACAGAACA
CAGCAGGGCCAGAGAAAGGCCAAGCAGTGGCACTTCGAGTTGGAGCTGATATGTCTGTCA
TAAATCGTTGTCGTATTGATGCTTATCAAGACACCCTATATGCACATTCTCAAAGGCAAT
TCTATCGAGACTCCTACGTGACAGGTACTGTTGATTTCATATTTGGTAATGCAGCAGTTG
TATTCCAGAAATGTCAGATCGTAGCTAGAAAACCGAATAAAAGACAGAAAAACATGGTGA
CTGCACAAGGCAGGACGGACCCAAATCAGGCCACGGGGACATCAATTCAGTTCTGTGACA
TAATTGCAAGTCCGGACCTTGAACCAGTCATGAATGAATACAAAACATATCTTGGTAGGC
CATGGAAAAAACATTCAAGAACGGTAGTGATGCAATCATACCTAGATGGTCATATTGATC
CATCAGGTTGGTTTGAATGGCGCGGAGATTTTGCATTGAAGACATTGTATTATGGTGAAT
ATATGAACAATGGACCTGGTGCTGGTACTAGTAAGCGTGTCAAGTGGCCTGGTTATCATG
TCATTACTGATCCCAATGAGGCTATGCCGTTCACTGTGGCTGAGCTGATTCAGGGCGGAT
CATGGTTGAATTCGACTAGCGTGGCATATGTGGAAGGATTAGTTGAGTAGGGAATTATAA
AATTACTCTTCGTTTATGTAGACGACATTACTGAAAAGCTCAAAATTAGTACTAGTAATA
TATATAATGTACAACACAAGTAAAGGCATAGCCAGGATTAGGAGCTTAAAGCATGAAAAA
AAGAAAAAAAAACACAACTCTAGTATGACAAACATTTCCATGGCCTATTCCATACTGC