Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g063850.3.1
CDS Infomation

IAA-amido synthetase 3-9
Sequence

ATGCCTGAGGCACCAAAATCAGATGTTGTTACTGAAAAGAACAAGCAAATTCTTGATTTT
ATTGAAGAAGCTACCACCAATGTTGATGAGATTCAAAAGCAAGTCCTTGCTGAAATACTA
AGAGAAAATGCACATGTTGAGTATTTGCAGCGCCATGGCCTTAATGGTCATGTTGATAGA
GAAAACTTCAAGAAAATCATGCCTGTTATTACTTATGAGGATATTCAGTCTGATATCACT
CGTATCGCCAATGGTGATAAATCTCAAATCCTCTGCTCTCAGCCCATCTCTGAGTTTTTA
ACAAGTTCTGGTACGTCTGGTGGGGAACGAAAACTGATGCCGACGATTGAGGAGGAACTT
GCGAGAAGATCACAGCTTTACAGTCTTTTAATGCCTGTGATGAGTCAATTTGTTCCAGAC
CTTGAAAAAGGAAAAGGAATGTATTTTTTGTTTATAAAATCAGAGGCTAAAACACCAGGT
GGATTACCAGCTCGTCCTGTTTTAACAAGTTATTATAAAAGCCCTCATTTCAAAAACAGG
CAACCTGATCCATACACGAACTACACAAGCCCTAACGAAACCATTCTCTGTTCTGATTCA
TACCAAAGTATGTATTCCCAAATGCTCTGTGGCCTTTGCCAGAACAAACAAGTTCTTCGT
GTGGGTGCTGTTTTTGCCTCAGGTTTTATCCGTGCCATACGATTCTTAGAAAAGCATTGG
CCACTTCTTTGTCATGATATCAGAGTCGGAACCATTAATTCCCAAATCACCGATCTCTCA
ATTCGAGAGGCGGTGATGAACATACTTAAACCAGATACAAATTTAGCAGATTTTGTTGAG
GCTGAATGTAGTAAAAATTCATGGCAAGGGATTATTACTAGATTGTGGCCTAACACCAAA
TACATAGATGTTATTGTCACTGGTACTATGTCGCAATATATACCAACTCTTGATTACTAT
AGCAACGGTTTGCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGCTATTTTGGTGTC
AATTTGAACCCTCTTTGTAAACCAAGTGAAGTCGCTTATACCCTTATTCCTACAATGGGG
TATTTCGAATTCTTGCCTGTTCATCGAAACAACGGTGTGTCGAATTCAATTGCCATGCCT
AAATCACTTAATGAGAAAGAACAGCAAGAATTGGTTGATTTAGTTGATGTCAAGATTGGG
CAAGAGTATGAGCTTATTGTCACAACCTATGCTGGGCTTTATAGGTATCGTGTAGGCGAT
GTGCTGCGTGTAGCTGGATTCAAGAACAACGCGCCCCAATTCAATTTTATCTGCAGGAAG
AATGTAGTGTTGAGTATTGATTCAGACAAGACGGATGAAGTTGAACTTCAAAATGCAGTA
AAAAATGCAGTCACACATCTTATGCCATTTGATGCACATGTGACAGAATACACAAGTTAT
GCTGATACAACCACAACCATTCCAGGGCATTATGTGTTATACTGGGAGCTAAATGTTAAT
GGATCAACCCCAGTTCCTCCATCTGTTTTCGAAGATTGTTGTCTCACCATCGAAGAGTCT
CTCAACAGCGTATACCGCCAAGGTCGTGCCTCAGACAAATCCATTGGGCCATTGGAAATC
AAGATTGTTGAAAGTGGAACTTTTGATAAGTTGATGGACTATGCTATAAGTTTAGGTGCA
TCAATAAATCAGTACAAGACACCAAGATGTGTGAAATTTGAACCAATTGTTGAGCTATTG
AATTCAAGAGTAGTGTCAAACTACTTTAGCCCAAAATGCCCAAAATGGGTGCCAGGACAC
AAGCAATGGAACAACATGAATTAA

Peptide Sequence

PEP ID

Solyc07g063850.3.1
PEP Infomation

IAA-amido synthetase 3-9
Sequence

MPEAPKSDVVTEKNKQILDFIEEATTNVDEIQKQVLAEILRENAHVEYLQRHGLNGHVDR
ENFKKIMPVITYEDIQSDITRIANGDKSQILCSQPISEFLTSSGTSGGERKLMPTIEEEL
ARRSQLYSLLMPVMSQFVPDLEKGKGMYFLFIKSEAKTPGGLPARPVLTSYYKSPHFKNR
QPDPYTNYTSPNETILCSDSYQSMYSQMLCGLCQNKQVLRVGAVFASGFIRAIRFLEKHW
PLLCHDIRVGTINSQITDLSIREAVMNILKPDTNLADFVEAECSKNSWQGIITRLWPNTK
YIDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVAYTLIPTMG
YFEFLPVHRNNGVSNSIAMPKSLNEKEQQELVDLVDVKIGQEYELIVTTYAGLYRYRVGD
VLRVAGFKNNAPQFNFICRKNVVLSIDSDKTDEVELQNAVKNAVTHLMPFDAHVTEYTSY
ADTTTTIPGHYVLYWELNVNGSTPVPPSVFEDCCLTIEESLNSVYRQGRASDKSIGPLEI
KIVESGTFDKLMDYAISLGASINQYKTPRCVKFEPIVELLNSRVVSNYFSPKCPKWVPGH
KQWNNMN*

Transcript Sequence

Transcript ID

Solyc07g063850.3.1
Transcript Infomation

IAA-amido synthetase 3-9
Sequence

ACAAAAGCCACACTTCAACCAAACATCCCTTTAGAGGGTAACCCCTATATAAAGCCCCAT
TCTACTAACAACTTACACCCACACCAAACCAAAAAAAAGTTCACATAAACACTTCTTTCT
CCTCTGTAACAAACTCTCTCTTTTTTGTTCACAAAATATAGTTTCACTTTTGTTAATTAA
ACAAAAACTATGCCTGAGGCACCAAAATCAGATGTTGTTACTGAAAAGAACAAGCAAATT
CTTGATTTTATTGAAGAAGCTACCACCAATGTTGATGAGATTCAAAAGCAAGTCCTTGCT
GAAATACTAAGAGAAAATGCACATGTTGAGTATTTGCAGCGCCATGGCCTTAATGGTCAT
GTTGATAGAGAAAACTTCAAGAAAATCATGCCTGTTATTACTTATGAGGATATTCAGTCT
GATATCACTCGTATCGCCAATGGTGATAAATCTCAAATCCTCTGCTCTCAGCCCATCTCT
GAGTTTTTAACAAGTTCTGGTACGTCTGGTGGGGAACGAAAACTGATGCCGACGATTGAG
GAGGAACTTGCGAGAAGATCACAGCTTTACAGTCTTTTAATGCCTGTGATGAGTCAATTT
GTTCCAGACCTTGAAAAAGGAAAAGGAATGTATTTTTTGTTTATAAAATCAGAGGCTAAA
ACACCAGGTGGATTACCAGCTCGTCCTGTTTTAACAAGTTATTATAAAAGCCCTCATTTC
AAAAACAGGCAACCTGATCCATACACGAACTACACAAGCCCTAACGAAACCATTCTCTGT
TCTGATTCATACCAAAGTATGTATTCCCAAATGCTCTGTGGCCTTTGCCAGAACAAACAA
GTTCTTCGTGTGGGTGCTGTTTTTGCCTCAGGTTTTATCCGTGCCATACGATTCTTAGAA
AAGCATTGGCCACTTCTTTGTCATGATATCAGAGTCGGAACCATTAATTCCCAAATCACC
GATCTCTCAATTCGAGAGGCGGTGATGAACATACTTAAACCAGATACAAATTTAGCAGAT
TTTGTTGAGGCTGAATGTAGTAAAAATTCATGGCAAGGGATTATTACTAGATTGTGGCCT
AACACCAAATACATAGATGTTATTGTCACTGGTACTATGTCGCAATATATACCAACTCTT
GATTACTATAGCAACGGTTTGCCTCTTGTTTGCACCATGTATGCTTCTTCTGAGTGCTAT
TTTGGTGTCAATTTGAACCCTCTTTGTAAACCAAGTGAAGTCGCTTATACCCTTATTCCT
ACAATGGGGTATTTCGAATTCTTGCCTGTTCATCGAAACAACGGTGTGTCGAATTCAATT
GCCATGCCTAAATCACTTAATGAGAAAGAACAGCAAGAATTGGTTGATTTAGTTGATGTC
AAGATTGGGCAAGAGTATGAGCTTATTGTCACAACCTATGCTGGGCTTTATAGGTATCGT
GTAGGCGATGTGCTGCGTGTAGCTGGATTCAAGAACAACGCGCCCCAATTCAATTTTATC
TGCAGGAAGAATGTAGTGTTGAGTATTGATTCAGACAAGACGGATGAAGTTGAACTTCAA
AATGCAGTAAAAAATGCAGTCACACATCTTATGCCATTTGATGCACATGTGACAGAATAC
ACAAGTTATGCTGATACAACCACAACCATTCCAGGGCATTATGTGTTATACTGGGAGCTA
AATGTTAATGGATCAACCCCAGTTCCTCCATCTGTTTTCGAAGATTGTTGTCTCACCATC
GAAGAGTCTCTCAACAGCGTATACCGCCAAGGTCGTGCCTCAGACAAATCCATTGGGCCA
TTGGAAATCAAGATTGTTGAAAGTGGAACTTTTGATAAGTTGATGGACTATGCTATAAGT
TTAGGTGCATCAATAAATCAGTACAAGACACCAAGATGTGTGAAATTTGAACCAATTGTT
GAGCTATTGAATTCAAGAGTAGTGTCAAACTACTTTAGCCCAAAATGCCCAAAATGGGTG
CCAGGACACAAGCAATGGAACAACATGAATTAAAAAAGTTTTAATTAGCTAGCACAAGTT
TCTTTTGAGAGAGGATCAATTTTTAGTGCTAGATATAATTGTTAAGATCATCTTGGTTAG
GTTGACCCAAACCAATTTTATGGTTTTTTTTCTTTTCTTAATTCACTTTAAATCTTGGTA
TTTAAGTCTTTGTAGAATTTAACTTGTTCTTCATGATGGTAGAATCTTGAATTTAGCCAT
GTACAAAAAGAAAAAAAACAGTTCCTATTCTTAAAAAAAAAAAAAGCTTCTA