Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g063350.3.1
CDS Infomation	COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR)
Sequence	ATGGATTCGAGGATTCGTTTGGATTATGCTCTGTTTCAGCTAACTCCAACACGAACAAGG TGCGATCTTGTAATCTTTGCTGGTGAAAAATCGGAGAAATTAGCTTCTGGTTTGCTTGAA CCTTTTCTCATTCATCTCAAATCCGCTAAAGATCAGATTTCTAAAGGAGGCTATTCAATT ACTCTTCGACCTTTGATCGCTAATGTTTGTTGGTTCACTAAAGCAACTTTACAGAGGTTT GTGAAATTTGTTAGTACTCCTGAAATTATCGAGCGATTTGTAAGCATAGAAAGAGATATT ATGCAGATTGAGAGTGAACAAGCTAATGGTAGTATCAACGTTGAAGGAAATGCATCAGCT TTTGATGGAGATTCCAAATTCTCTGCTGGTTTTTCAAAGTCCAACGGTGAATCTAATGGT GTTGGTGATGCTACAAAGGAAGAAAATCCTAAGATTCGTCTTCAACGCGTTCTAGAAAGT AGAAAAGCAGTTTTAAGGAAAGAGCAAGCAATGGCATATGCTCGCGCTTTGGTATCTGGC TTTGATATGGATAATTTGGATGATCTCATATCTTTTTCCAATGCTTTTGGCGCTCTACGT TTAAGAGAAGCCTGCATTAAGTTTATGGAGCTGTGCAACAAAAAGAGAGATGATGGGATC TGGATGGATGAAGTTGCTGCTCTTCAAGCCTACTCTCCTTCTGAGTTTTCGTATTTTGGG AGGTCGGGGATCACGCTTGCTGCTGATGTTACTCAAGATAATCAAAGTATTGATCTTTCC ATCAGAAAACAGAATGATGATACATTGAGTCATGGAAGTCTGGATACTAGTCAAGAAAAT GGTTTACCACCACCTATCAAAGTTCACTCAACAGAAGGGAAATCACAGCCAATGTGGCCA AACAATATGCCACCTTACCTGCAAAACTATCAAAATCCTGCATTTCAACAAATTCCACCA TATCCAGGGTACATGTTTTCGGGCAATCCGAGTTACTATACTGGAATGCCATGGCCTGTG AATCCAGAAGATTCTAGTCGAGGTCCCGGTCCTGAATCAGATTATAATTGGAAGAATAAA CCACCTTCCAAGAACAAGAAGAAATATTCAAACGGGGATAGAAATGAAAGCAACAATTCA AGCTCTAACGGTGACTCTGATGATTATGAGGAGGATAAGAAAATGCATCATGGGAAAAAA TCATCAAGAAAAGTTGTTATCCGCAACATAAACTATATAGCCTCGAAGAGAAATGAACAA AGTGATCACAGCAGCACCGAGGATAGTTCATCTGATGAGGATGGATCCACTGATGCAGGT TCCCTCAGAAAGCAGGTAGAGGAAGCAGTTGGATCATGGGAGAGGCATCATAACTCAACG TCTCGGAACAAGAAGAAGCGAGATGGAAAGAAGAGAAACAACAGTGGGAGTATATCAAAT GGTGCCTCTAAGGATGAAGTAACCAACAGTGGTAAGAATTGGGATATCTTCCAGAACATT CTAATGCAAGATGCAGATTCAAGAACCGATGACACGAGGCCAAAAGATGTCCAGGAAGAG TACTTGATGACAAAGAAAATGACTCCTTCAACTGATCCTCTTATAATAAACGAGAGAAAC ATGGGACACGGAGATGAAATACCACGACAAAACATGTGGGAAGAGAAGAGGCGTGGACCA GTTATTATAAGAGAGAGCACAGATGAAGAGTTGTTATTTTCGCATAGAACTCAGGAACCA AAGGGCTATCCTCAGTCTATCTCGTCGAACATTGACACTGAACGAGTTGTTCTTAAGAGC CAAAAAGAGGAGGATTGGTTAGCTGGCAATCTACTAAATAAATCAACATATCAAGGAAAA AGCTCAGATCAAAGTATCTTTGTTGGAGATTATGCTTCAGCCTCTCATGATGATCATTTG AAAACAGGGAAAGATAAGAAAGGCGTCCAGTTTGATGATTCCATTGTGGTTCGAGCCCAT TCGGTTGATAATGTGTCTGATTATGACCAACAGACAGACATTTTCATGGTCTTAGACATC GTCGGAGCTGAACAAGTTAAGCACAGCATGCCTAATCACGCGGAAGAGAAGCTTGATCCT TCTGATGCATGTGAACCAAATGATCTTTTCATGGTTCTTGGAAGAGATTCAGCTGCTGAG CAAGTTTCAGCCTCTCGGGATACTGAAATGTATGACGAAAATGATGTCTTCCTGTCTGAA ACTCTTAAGAGTCACACTGATATCAGACCTGCTTCTGCTGAGACAAAGCTTCAAACAAAA GGCGAAGGGACCAACAAAAGGATCGGTAGGGACCTTGGGCGAAAGGCAGTTATTAAAGAA CCAAAATCTAAAACTTCCGTAACCGGATCTCTTGGAAGGACCAAATCTGATACATCATCA AGAATCAAGAAATCACCTTCCACATTTCAGAAGAGCAAAGCTGACAAGGACGAGGAGAGT CGAAAGAAATTAGAACAATCATTATTGCAACGTCAAAAGAGAATCGCAGAAAGAAGTGGT GCCACTGGTTTAACCAAACCAACATCAAGGAAGAATCCAGCCACATCTTCAACAATTGAG AAATCAAAACCTGAGGCAACCAATAGATTACAAAAAACAGTTTTTAAGAGTTCCACTATA GAGCGTCTCGCGTCTACAACTACAAGGACAGCTAAGGATCGATCCACTGACTCAAAAACC ACTCCAAGCAGGAAAGCAAGTCGAAAGGAGAACAAAGTGATTGCTCCAACAAAGAAATCA GCTGGAAAAGAGAGTACTAAGCAAGGTCCCCGTAAGTCCAAGCCTTCGGATACTAAAGGC CACTCTTCATCTGAACCTCCTCAGAAGGAAAAAGATAGCAACACTGGAGTAAACTCAATG TTAAACGAACGTGGAGCAGAACTGAGTCCACAAGTATCTAGTGAAGTCGTTGATGCTAAG AACACGGAGGAGGTACGTAGCATATCATTAATCGAGAAGAAGATAGATACACCTATGATT TCTGCTGAACATTCAATAGATGACAAGAAACAAAGTCCTAACAAGGCTGTTAAGTTTCTA CTGTCTGAAGTTGAAACCTCAGCAGCAGTTGACAATGCTATTGGAGTTATAAGTCATCTG ACTTCCTCTGTATCGAACGTGCATTTGGACACTCCAGTATGCCAAGACATACTCTCTAAT GAAGTTTCCACCCCACCTCCAAATAATGAAATGAACTTCGAGACGAATCAAGGAAGAAGG AAATGGACAACTGATGAAAGTTCACTTAGAGTTACGAAAGGATTCAGAAAGCTTCTTTAT TTTGGTAGAAAAAACTGA

Peptide Sequence

PEP ID	Solyc07g063350.3.1
PEP Infomation	COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR)
Sequence	MDSRIRLDYALFQLTPTRTRCDLVIFAGEKSEKLASGLLEPFLIHLKSAKDQISKGGYSI TLRPLIANVCWFTKATLQRFVKFVSTPEIIERFVSIERDIMQIESEQANGSINVEGNASA FDGDSKFSAGFSKSNGESNGVGDATKEENPKIRLQRVLESRKAVLRKEQAMAYARALVSG FDMDNLDDLISFSNAFGALRLREACIKFMELCNKKRDDGIWMDEVAALQAYSPSEFSYFG RSGITLAADVTQDNQSIDLSIRKQNDDTLSHGSLDTSQENGLPPPIKVHSTEGKSQPMWP NNMPPYLQNYQNPAFQQIPPYPGYMFSGNPSYYTGMPWPVNPEDSSRGPGPESDYNWKNK PPSKNKKKYSNGDRNESNNSSSNGDSDDYEEDKKMHHGKKSSRKVVIRNINYIASKRNEQ SDHSSTEDSSSDEDGSTDAGSLRKQVEEAVGSWERHHNSTSRNKKKRDGKKRNNSGSISN GASKDEVTNSGKNWDIFQNILMQDADSRTDDTRPKDVQEEYLMTKKMTPSTDPLIINERN MGHGDEIPRQNMWEEKRRGPVIIRESTDEELLFSHRTQEPKGYPQSISSNIDTERVVLKS QKEEDWLAGNLLNKSTYQGKSSDQSIFVGDYASASHDDHLKTGKDKKGVQFDDSIVVRAH SVDNVSDYDQQTDIFMVLDIVGAEQVKHSMPNHAEEKLDPSDACEPNDLFMVLGRDSAAE QVSASRDTEMYDENDVFLSETLKSHTDIRPASAETKLQTKGEGTNKRIGRDLGRKAVIKE PKSKTSVTGSLGRTKSDTSSRIKKSPSTFQKSKADKDEESRKKLEQSLLQRQKRIAERSG ATGLTKPTSRKNPATSSTIEKSKPEATNRLQKTVFKSSTIERLASTTTRTAKDRSTDSKT TPSRKASRKENKVIAPTKKSAGKESTKQGPRKSKPSDTKGHSSSEPPQKEKDSNTGVNSM LNERGAELSPQVSSEVVDAKNTEEVRSISLIEKKIDTPMISAEHSIDDKKQSPNKAVKFL LSEVETSAAVDNAIGVISHLTSSVSNVHLDTPVCQDILSNEVSTPPPNNEMNFETNQGRR KWTTDESSLRVTKGFRKLLYFGRKN*

Transcript Sequence

Transcript ID	Solyc07g063350.3.1
Transcript Infomation	COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR)
Sequence	AAAAAATTTAGCAAATTACACCATTGATAAGTTTAAAGTTTACTCTTTTGACCTTTTTAA GTCAAATTTTGGACGTTTGAATATTCAATTTCTTCAAAATAAGACTTATTTATTTGAATA TTACCCTTTGAATTACAATTTGTTATAGTATATATATATAGGGGTAGAGAAAAAGAAAAA AAGTAGTAGTGTCATTATTAATAGAATATTTTGGTTTACTTGGAATATTTCCCTAAATAA GTTGAATTGTTTCTTTTTAGCATTAACCATTGATTAACTTGACTCGTTCAAATTTAATTC AATTATGCATTATTAAGAAGACAAATATTCTATATCATAATTTTTTTTATTTCCAAATTC AAATTTAAACTCGAACCTAGTCATAACGATAGGTAGTGTAAAAGTCTGGTAAATTCGGTT ACACAGCAGATATAGTGGGACTTCACCCTTGTGAGTTTTATTATTACACTTTGTGAGTAA CAGTAAAGCAAAGAAAAAATCAATTTTTAGAAGAAAAAAAAATATCAGACAAATTGAATT ACAAAATAGAAAAGAAGGAAGAGGAGCCCGCCATTGTTGCTGTCTTCAACTATAAGAATT ATAAACTTTTGAAACGACCCCTCACCCAACCCCTGCCCCATCATCGTACTCGAAATCGAC AAAACTCAGTAATTTTAATTTAAAATTGATATTTTTGTTAAAACGATAAAAAAATATCAT CAACATACATGAAATACCTTTCGTTAATAATTTGGTACAGAATTATTTGTGGTCATAGTT TTGTTAAAAAATGCTCATACTATTTGATAATATAGACTTATTAACACAAATATCAATATC AAAATAGTTATTCTGAATAAAAAATTCTGATTTCGCCATTGTATTATACGAAAAACTCGC AAAACACCATATCCAGTATATACTATATACTATAAGATGTTTTTACATAAATTCATAGAT TCATTATTCTAAAATTTTATGAATTTGTCGGCATTGAATTTAGTGACCCCATTTTTTGCT AATTCACTCCATTTTTCAGTTTCTTCAACAAAAAAAACTAGTATTTTTTTTTTTACTTTT GAAAGGAGTCTTAATTTACTAAAATTGTTCATTGAAATATTGTTTGTACTGAAAAAAATA TATTATTATATGGTTTTCCAGGACCCATTTGATATATGCTTTGTTTTAGTAACTCAGTCT CTATATATTTCAATTTTCTTCAACAAACACTAAATTACTGTTGAATTCTTGTTTTATTAG TGCAAAATCATTATAATGGATTCGAGGATTCGTTTGGATTATGCTCTGTTTCAGCTAACT CCAACACGAACAAGGTGCGATCTTGTAATCTTTGCTGGTGAAAAATCGGAGAAATTAGCT TCTGGTTTGCTTGAACCTTTTCTCATTCATCTCAAATCCGCTAAAGATCAGATTTCTAAA GGAGGCTATTCAATTACTCTTCGACCTTTGATCGCTAATGTTTGTTGGTTCACTAAAGCA ACTTTACAGAGGTTTGTGAAATTTGTTAGTACTCCTGAAATTATCGAGCGATTTGTAAGC ATAGAAAGAGATATTATGCAGATTGAGAGTGAACAAGCTAATGGTAGTATCAACGTTGAA GGAAATGCATCAGCTTTTGATGGAGATTCCAAATTCTCTGCTGGTTTTTCAAAGTCCAAC GGTGAATCTAATGGTGTTGGTGATGCTACAAAGGAAGAAAATCCTAAGATTCGTCTTCAA CGCGTTCTAGAAAGTAGAAAAGCAGTTTTAAGGAAAGAGCAAGCAATGGCATATGCTCGC GCTTTGGTATCTGGCTTTGATATGGATAATTTGGATGATCTCATATCTTTTTCCAATGCT TTTGGCGCTCTACGTTTAAGAGAAGCCTGCATTAAGTTTATGGAGCTGTGCAACAAAAAG AGAGATGATGGGATCTGGATGGATGAAGTTGCTGCTCTTCAAGCCTACTCTCCTTCTGAG TTTTCGTATTTTGGGAGGTCGGGGATCACGCTTGCTGCTGATGTTACTCAAGATAATCAA AGTATTGATCTTTCCATCAGAAAACAGAATGATGATACATTGAGTCATGGAAGTCTGGAT ACTAGTCAAGAAAATGGTTTACCACCACCTATCAAAGTTCACTCAACAGAAGGGAAATCA CAGCCAATGTGGCCAAACAATATGCCACCTTACCTGCAAAACTATCAAAATCCTGCATTT CAACAAATTCCACCATATCCAGGGTACATGTTTTCGGGCAATCCGAGTTACTATACTGGA ATGCCATGGCCTGTGAATCCAGAAGATTCTAGTCGAGGTCCCGGTCCTGAATCAGATTAT AATTGGAAGAATAAACCACCTTCCAAGAACAAGAAGAAATATTCAAACGGGGATAGAAAT GAAAGCAACAATTCAAGCTCTAACGGTGACTCTGATGATTATGAGGAGGATAAGAAAATG CATCATGGGAAAAAATCATCAAGAAAAGTTGTTATCCGCAACATAAACTATATAGCCTCG AAGAGAAATGAACAAAGTGATCACAGCAGCACCGAGGATAGTTCATCTGATGAGGATGGA TCCACTGATGCAGGTTCCCTCAGAAAGCAGGTAGAGGAAGCAGTTGGATCATGGGAGAGG CATCATAACTCAACGTCTCGGAACAAGAAGAAGCGAGATGGAAAGAAGAGAAACAACAGT GGGAGTATATCAAATGGTGCCTCTAAGGATGAAGTAACCAACAGTGGTAAGAATTGGGAT ATCTTCCAGAACATTCTAATGCAAGATGCAGATTCAAGAACCGATGACACGAGGCCAAAA GATGTCCAGGAAGAGTACTTGATGACAAAGAAAATGACTCCTTCAACTGATCCTCTTATA ATAAACGAGAGAAACATGGGACACGGAGATGAAATACCACGACAAAACATGTGGGAAGAG AAGAGGCGTGGACCAGTTATTATAAGAGAGAGCACAGATGAAGAGTTGTTATTTTCGCAT AGAACTCAGGAACCAAAGGGCTATCCTCAGTCTATCTCGTCGAACATTGACACTGAACGA GTTGTTCTTAAGAGCCAAAAAGAGGAGGATTGGTTAGCTGGCAATCTACTAAATAAATCA ACATATCAAGGAAAAAGCTCAGATCAAAGTATCTTTGTTGGAGATTATGCTTCAGCCTCT CATGATGATCATTTGAAAACAGGGAAAGATAAGAAAGGCGTCCAGTTTGATGATTCCATT GTGGTTCGAGCCCATTCGGTTGATAATGTGTCTGATTATGACCAACAGACAGACATTTTC ATGGTCTTAGACATCGTCGGAGCTGAACAAGTTAAGCACAGCATGCCTAATCACGCGGAA GAGAAGCTTGATCCTTCTGATGCATGTGAACCAAATGATCTTTTCATGGTTCTTGGAAGA GATTCAGCTGCTGAGCAAGTTTCAGCCTCTCGGGATACTGAAATGTATGACGAAAATGAT GTCTTCCTGTCTGAAACTCTTAAGAGTCACACTGATATCAGACCTGCTTCTGCTGAGACA AAGCTTCAAACAAAAGGCGAAGGGACCAACAAAAGGATCGGTAGGGACCTTGGGCGAAAG GCAGTTATTAAAGAACCAAAATCTAAAACTTCCGTAACCGGATCTCTTGGAAGGACCAAA TCTGATACATCATCAAGAATCAAGAAATCACCTTCCACATTTCAGAAGAGCAAAGCTGAC AAGGACGAGGAGAGTCGAAAGAAATTAGAACAATCATTATTGCAACGTCAAAAGAGAATC GCAGAAAGAAGTGGTGCCACTGGTTTAACCAAACCAACATCAAGGAAGAATCCAGCCACA TCTTCAACAATTGAGAAATCAAAACCTGAGGCAACCAATAGATTACAAAAAACAGTTTTT AAGAGTTCCACTATAGAGCGTCTCGCGTCTACAACTACAAGGACAGCTAAGGATCGATCC ACTGACTCAAAAACCACTCCAAGCAGGAAAGCAAGTCGAAAGGAGAACAAAGTGATTGCT CCAACAAAGAAATCAGCTGGAAAAGAGAGTACTAAGCAAGGTCCCCGTAAGTCCAAGCCT TCGGATACTAAAGGCCACTCTTCATCTGAACCTCCTCAGAAGGAAAAAGATAGCAACACT GGAGTAAACTCAATGTTAAACGAACGTGGAGCAGAACTGAGTCCACAAGTATCTAGTGAA GTCGTTGATGCTAAGAACACGGAGGAGGTACGTAGCATATCATTAATCGAGAAGAAGATA GATACACCTATGATTTCTGCTGAACATTCAATAGATGACAAGAAACAAAGTCCTAACAAG GCTGTTAAGTTTCTACTGTCTGAAGTTGAAACCTCAGCAGCAGTTGACAATGCTATTGGA GTTATAAGTCATCTGACTTCCTCTGTATCGAACGTGCATTTGGACACTCCAGTATGCCAA GACATACTCTCTAATGAAGTTTCCACCCCACCTCCAAATAATGAAATGAACTTCGAGACG AATCAAGGAAGAAGGAAATGGACAACTGATGAAAGTTCACTTAGAGTTACGAAAGGATTC AGAAAGCTTCTTTATTTTGGTAGAAAAAACTGAATTTTTTCCTTGTTTTGACATTCCTTA TTGCTGTGAAATCCTGTGTGATGAGTGTTGTGGTTATTGTTCAATAAAATCTTGTATCAA AAAAGAAAGAATTCATTCAATTCTCTTTTGTTGTATAACATTATTGTTTGTGTTTTTATG AATTTGTCTTTGCGCGACTTACTAAACGCTATTTTG