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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g062810.3.1
CDS Infomation

Branched-chain-amino-acid aminotransferase-like protein (AHRD V3.3 *** I3SQ86_MEDTR)
Sequence

ATGGCAGCTTCAAACTCTTCATTTGATCAGACATCAGAAGCAGCTGTAGCAGCAGAGGCT
AAGAGTGGGGAAGATTTCTCAGTTCATGTGTTCTCTTCCTCCGCCGAGTTAGTTGAGAAG
TTGCACGAGAAGTGGAATTCAGTGAAGCAGCAACCTTATCCGGCTATGTATTCTAGTGTC
TATGGTGGAATCATTCTTGAACCAGCAATGATGGTTATTCCAATGGATGATCACATGGTG
CATCGAGGACATGGCGTCTTTGACACAGCTATTATTTTTGATGGCTATCTGTACGAATTG
GATGTCCACATTAACCGCTTCCTTAGATCAGCATCCAAAGCAAGGATCGCGTCTCCATTT
ACATTTTCAGAACTTAAAAGCATTCTTATTCAACTTTCTGCAGCATCAAAGTGCAGGAAA
GGCACTCTGAGATATTGGTTGAGTGCAGGGCCTGGGAACTTCTTACTCTCCCCAGCTAAA
TGCCCGACATCTGCATTCTATGCTGTGGTGATTGATGAAGATTTCGCACAATGCAAAGAA
GGTGTAAAAGTGATAACTTCTACGATCCCCATGAAATCACCTCTTTTTGCCACTATGAAA
AATGTGAACTACCTTCCCAATGTACTCTCCGTAATGGAGGCTGAGGATAAGGGAGCATTT
TCATCTATATGGGTTGATGAAAAAGGTTATATCGCTGAGGGTCCAAACGTGAACGTTGCT
TTTATAAATTCTGATAAGGAGCTTATCTTGCCTAGCTTTGATAAGATCCTAAGCGGATGC
ACTGCTATGAGGTTTCTTCAACTCGCACCCAAGTTGGTCGAGCAGGGACGTCTGAAATGT
GTCAAAATAACAGACATCACAGTCGAAGAGGCCAAAGAATCGGCTGAAATGATGTACGTT
GGAAGCACACTTCCTTTGTTACCTATCATCATGTGGGATGAGAAACCTATTGGAAATGGT
GAAGTCGGAGAACTGACAATGGCACTCTCAGATTTACTTTGGGAAGATATGGCAGCTGGT
CCGGAATCACAGAGAATTCCAGTTCCATATGCATAA

Peptide Sequence

PEP ID

Solyc07g062810.3.1
PEP Infomation

Branched-chain-amino-acid aminotransferase-like protein (AHRD V3.3 *** I3SQ86_MEDTR)
Sequence

MAASNSSFDQTSEAAVAAEAKSGEDFSVHVFSSSAELVEKLHEKWNSVKQQPYPAMYSSV
YGGIILEPAMMVIPMDDHMVHRGHGVFDTAIIFDGYLYELDVHINRFLRSASKARIASPF
TFSELKSILIQLSAASKCRKGTLRYWLSAGPGNFLLSPAKCPTSAFYAVVIDEDFAQCKE
GVKVITSTIPMKSPLFATMKNVNYLPNVLSVMEAEDKGAFSSIWVDEKGYIAEGPNVNVA
FINSDKELILPSFDKILSGCTAMRFLQLAPKLVEQGRLKCVKITDITVEEAKESAEMMYV
GSTLPLLPIIMWDEKPIGNGEVGELTMALSDLLWEDMAAGPESQRIPVPYA*

Transcript Sequence

Transcript ID

Solyc07g062810.3.1
Transcript Infomation

Branched-chain-amino-acid aminotransferase-like protein (AHRD V3.3 *** I3SQ86_MEDTR)
Sequence

ATTCGTATTTATATACGAACGTCAAACAAAATTGATTGACAGTATAGTAGTAAAATAAGG
ACAGTAAATATATCAATTTCGAATTGGTAGAGCAAGTGAAGAAGTATATACATTTTGATA
ATGCACAATTATTGTCATTTTCTCTTCATTATACATTCAATTTTATGTCCAATAATGACT
CAAAAATAGTAGAAAAAAGGGCTTTTGAATTCCAATTTCGAATCATACAGAATAACAAAG
AGTAATTGGACGGCAGTTCTGTCTTTAGCATCAAAACCACTTCTCCAAAACAATGTAGTA
GTACCAACAAACGTTAAGGACAAAAAAAAATGATTCTTTTTAGTTTTTTACACTAAAATA
TCAAACCAAATGGACTGCTTTTGTCTCATTTGTCATCTGTTTTCTGCAGCTATAAAATTC
TGGTCCTTCTCATTTCATCCATCTATTTCTTTGTAAAGTTTCAATCTTTTTGCACTATGG
CAGCTTCAAACTCTTCATTTGATCAGACATCAGAAGCAGCTGTAGCAGCAGAGGCTAAGA
GTGGGGAAGATTTCTCAGTTCATGTGTTCTCTTCCTCCGCCGAGTTAGTTGAGAAGTTGC
ACGAGAAGTGGAATTCAGTGAAGCAGCAACCTTATCCGGCTATGTATTCTAGTGTCTATG
GTGGAATCATTCTTGAACCAGCAATGATGGTTATTCCAATGGATGATCACATGGTGCATC
GAGGACATGGCGTCTTTGACACAGCTATTATTTTTGATGGCTATCTGTACGAATTGGATG
TCCACATTAACCGCTTCCTTAGATCAGCATCCAAAGCAAGGATCGCGTCTCCATTTACAT
TTTCAGAACTTAAAAGCATTCTTATTCAACTTTCTGCAGCATCAAAGTGCAGGAAAGGCA
CTCTGAGATATTGGTTGAGTGCAGGGCCTGGGAACTTCTTACTCTCCCCAGCTAAATGCC
CGACATCTGCATTCTATGCTGTGGTGATTGATGAAGATTTCGCACAATGCAAAGAAGGTG
TAAAAGTGATAACTTCTACGATCCCCATGAAATCACCTCTTTTTGCCACTATGAAAAATG
TGAACTACCTTCCCAATGTACTCTCCGTAATGGAGGCTGAGGATAAGGGAGCATTTTCAT
CTATATGGGTTGATGAAAAAGGTTATATCGCTGAGGGTCCAAACGTGAACGTTGCTTTTA
TAAATTCTGATAAGGAGCTTATCTTGCCTAGCTTTGATAAGATCCTAAGCGGATGCACTG
CTATGAGGTTTCTTCAACTCGCACCCAAGTTGGTCGAGCAGGGACGTCTGAAATGTGTCA
AAATAACAGACATCACAGTCGAAGAGGCCAAAGAATCGGCTGAAATGATGTACGTTGGAA
GCACACTTCCTTTGTTACCTATCATCATGTGGGATGAGAAACCTATTGGAAATGGTGAAG
TCGGAGAACTGACAATGGCACTCTCAGATTTACTTTGGGAAGATATGGCAGCTGGTCCGG
AATCACAGAGAATTCCAGTTCCATATGCATAAGAAATCAATCTCAAATCGAAGAACAATG
CTGACAGAGTACGCTCTAAACAGATTTGTTTTGCATGTTGAGCTTCTCCAGCATTGCATA
ATGTCGCTTTTCAAGTATTGATCACTACCTGAAGTGACGCAACTAAATATCTTGCAATGT
AATGGTAGTTGGTAGATGAACTTTTTTCTAAGTTTTATGTTTGGAATAAAATTACACTAG
ACAAATCTGAAAACGATTTTCATTTGAACTTATTCAAATGAAACTTCAAAACTGTATCAT
GAAATTTAGAGAC