Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g062390.3.1
CDS Infomation

Tubby-like F-box protein (AHRD V3.3 *** K4CGS2_SOLLC)
Sequence

ATGTCACTTCGTCGTTCATTTCTCTCTCGAAGAATCATCAGTCGATCTTTTACATTTTCC
AAATCATTCAAAGAATTCAAACTTCCAGAACCTTCTACTAGAGATGATTTCGCTGTTGGA
GATGAACAAAACGGCGCCGCCGGTGAATCGGATTCCGGCGATGCAACGTCGTCGTGGTCG
AATATGTTGCCGGAGCTGTTGAGAGAGATTATACAGAGAGTGGAAGCTACGGAGGACAGT
TGGCCTCTACGTCAAAACGTCGTCGCTTGTGGATGTGTGTGTAAGAGATGGAGGCAAGTT
ACTGAGGATGTAGTTGAGTCGTCTCTTCAGGCTGGGAAAATTACTTTTCCGTCTTGCCTT
AAACAGCCAGGGCCTCGGGACCCTCCTCTTCAATGTTTCATCAAGCGTGACAAGAAGAAC
GCGACCTTTTACCTATATCTTGCACTTTCACCCTCATTAATGGACCAGGGGAAGTTCCTC
TTAGCAGCCCGGAGGTACAGAAATGGTGCTCACATTGAATATATAATATCTCTCGACGCA
GATGATTTGTCACAGAGAAGTAAGGCATATGTTGGGAAGTTAAGATCGGACTTTCTTGGA
ACCAATTTTACCATATATGATAGTCAAGCCCCACACAATGGGGCAAGGCCATCAAGCAGC
CGGTCTTGTCGACGTTTTGCAAGTAAGCAAATTAGTCCCCAATTACCAGCTGGTAATTTT
GAAGTGGGAAGTGTTTCCTACAAGTTAAACCTGCTGAAGTCAAGAGGACCAAGGAGGATG
ATTTGTTCGCTCAATTGCCCCTGTCCTGGAGAAGCTGCCTCGGACAAATCTCAGGATGCT
CTGAAGAAGAAGCTGGTTGGTTCCGCAGAAGCCAACTCTACAGTTCTGAAAAACAAAGCT
CCAAGATGGCATGAGCATTTGCAATGTTGGTGTTTAAATTTCCATGGAAGGGTCACCGTT
GCATCTGTGAAAAACTTTCAGCTAGTGGCAACGATGGACCAAAGCCAACCTGATGGAAAA
GGTGACGAGGATACAGTTATCCTCCAGTTTGGAAAAGTAGGAGATGATGTTTTTACAATG
GACTACAGGAAGCCTTTGTCTGCTTTCCAAGCGTTTGCAATTTGCCTGACCAGTTTTGGC
ACTAAATTGGCCTGTGAATAG

Peptide Sequence

PEP ID

Solyc07g062390.3.1
PEP Infomation

Tubby-like F-box protein (AHRD V3.3 *** K4CGS2_SOLLC)
Sequence

MSLRRSFLSRRIISRSFTFSKSFKEFKLPEPSTRDDFAVGDEQNGAAGESDSGDATSSWS
NMLPELLREIIQRVEATEDSWPLRQNVVACGCVCKRWRQVTEDVVESSLQAGKITFPSCL
KQPGPRDPPLQCFIKRDKKNATFYLYLALSPSLMDQGKFLLAARRYRNGAHIEYIISLDA
DDLSQRSKAYVGKLRSDFLGTNFTIYDSQAPHNGARPSSSRSCRRFASKQISPQLPAGNF
EVGSVSYKLNLLKSRGPRRMICSLNCPCPGEAASDKSQDALKKKLVGSAEANSTVLKNKA
PRWHEHLQCWCLNFHGRVTVASVKNFQLVATMDQSQPDGKGDEDTVILQFGKVGDDVFTM
DYRKPLSAFQAFAICLTSFGTKLACE*

Transcript Sequence

Transcript ID

Solyc07g062390.3.1
Transcript Infomation

Tubby-like F-box protein (AHRD V3.3 *** K4CGS2_SOLLC)
Sequence

ACTCTAATTTACAGTTTCAAAAAAAAAAAAAAAAAAAAAAATTCATCAAAATGTCACTTC
GTCGTTCATTTCTCTCTCGAAGAATCATCAGTCGATCTTTTACATTTTCCAAATCATTCA
AAGAATTCAAACTTCCAGAACCTTCTACTAGAGATGATTTCGCTGTTGGAGATGAACAAA
ACGGCGCCGCCGGTGAATCGGATTCCGGCGATGCAACGTCGTCGTGGTCGAATATGTTGC
CGGAGCTGTTGAGAGAGATTATACAGAGAGTGGAAGCTACGGAGGACAGTTGGCCTCTAC
GTCAAAACGTCGTCGCTTGTGGATGTGTGTGTAAGAGATGGAGGCAAGTTACTGAGGATG
TAGTTGAGTCGTCTCTTCAGGCTGGGAAAATTACTTTTCCGTCTTGCCTTAAACAGCCAG
GGCCTCGGGACCCTCCTCTTCAATGTTTCATCAAGCGTGACAAGAAGAACGCGACCTTTT
ACCTATATCTTGCACTTTCACCCTCATTAATGGACCAGGGGAAGTTCCTCTTAGCAGCCC
GGAGGTACAGAAATGGTGCTCACATTGAATATATAATATCTCTCGACGCAGATGATTTGT
CACAGAGAAGTAAGGCATATGTTGGGAAGTTAAGATCGGACTTTCTTGGAACCAATTTTA
CCATATATGATAGTCAAGCCCCACACAATGGGGCAAGGCCATCAAGCAGCCGGTCTTGTC
GACGTTTTGCAAGTAAGCAAATTAGTCCCCAATTACCAGCTGGTAATTTTGAAGTGGGAA
GTGTTTCCTACAAGTTAAACCTGCTGAAGTCAAGAGGACCAAGGAGGATGATTTGTTCGC
TCAATTGCCCCTGTCCTGGAGAAGCTGCCTCGGACAAATCTCAGGATGCTCTGAAGAAGA
AGCTGGTTGGTTCCGCAGAAGCCAACTCTACAGTTCTGAAAAACAAAGCTCCAAGATGGC
ATGAGCATTTGCAATGTTGGTGTTTAAATTTCCATGGAAGGGTCACCGTTGCATCTGTGA
AAAACTTTCAGCTAGTGGCAACGATGGACCAAAGCCAACCTGATGGAAAAGGTGACGAGG
ATACAGTTATCCTCCAGTTTGGAAAAGTAGGAGATGATGTTTTTACAATGGACTACAGGA
AGCCTTTGTCTGCTTTCCAAGCGTTTGCAATTTGCCTGACCAGTTTTGGCACTAAATTGG
CCTGTGAATAGATTCTTTAGAACTTGTAATATACTTCCTAGTTTGCTTTTCGTTTTTTCG
TTTTCTTCGGGTGCACAGTGACACTTGTTTAATCTAGTATTCTCTACTCGTGCTATTTAG
TAAATGTAGCAGATGTTGGGACCAAGTGTAATTTAACCTTTATGAGAATTTCAACATCAA
TGTAACAAATAGCGGAGTTTTCTGTACTACTCGGGGTAATTTCCTAGAAACATATTCCTG
CTCATATTTAGTAGTTTCTCTAATCTGTAGAAACTCTTCATAAATAACTTAATTCTAGAT
AAGTGCTAAAAATGCATAACATGCAGTAACAATGAACATACAAAATCATTCACATAGGGC
AATTATTATTATTTTTATATAGAAGAGGTAACATCTCCATTAGTATAGAATTGTAGCATC
AAATTATATTCCACAAAGCAAATGGATATACTTGACATATTCCCATATGCCAATTATGTC
TTCCATTATATCTCAAGTGCTGATCTGAAGAATGACGGGGATGTCATGCTTCAAGAGACT
GAGAACTTTTTTCTCAAGAAAACGGGAAGCACAAGATAACATCCCTTGCACAAGCATAAA
CGTCTTATTTTTCCACAGAAATAACACCCATGTAGCCAAGAAATCCAGAACCATCGATCC
ATACAAAGGCACAAGCACCCATAGTGGCTATAGAAAGAGGGCTAACAGAAAAAGTTGTCC
ATGTACATAACTACAGTTAGAACTGGAATAGAGATTTGAGAAGCCAAGAGGCTCTTCATT
TCTTTCCTCTAAGTTTGGCACCAAGAGCTCTCTCCAGTTTAGAGATGATTTGTTGATTTG
GAATTGCCTTTCCTGACTCGTACTCCTGGATGATTTGAGGCTTCTCATTTATCAGCTGCA
AAACAACAAGGAATATCAGAACCATTTTCACAGATTATCGAATCAGTCATCTGGTACTCT
CAATCTGTTCAACCCCCCACCCCCCTCTCTTAAGTCTTTGGGTGGCAGGAGGGGAGCAGG
GAGACAGAAAAATGGTATACCTGAGCAAGTTGAGACTGAGTCAGCTTCTTATCTTGTCGA
GCTTGCATGATGGCTTTCTTCAGCTCAGTCGGTACTTTTTGATCTGACAACAAGGTAAAA
AATGAAAAATTTCAAACAGAAAATGTCATACGGAAGAATGAGTTAGTTGTGGTAAAAAAT
ATTACTATATTGTTTGCTGAGGATGAAATGCATACATAAACGAGTAGAAACAGATACAGA
ACTCAAACACAGCTCAAATAACAAAATTAGATCATTAAATAGCAGGAGATCTATCAGAAC
GGAAGAAAGAGAACATATAAAAGAGAAGAGCGAGAACACAAATGAAATAAAGTTATTAAC
CACTATCTCCAGCAACGTGACATCACATGCATAAGAATTATGGATGTTGAATAAAACGAT
TTCTAGCGGGAACGAATAGAGCAGACTGCGTAATGTGTTTATGAATAAAGCAGTAGAGAT
GCAGAGAGAATATTAAGGATGATTTTCATTTGACAGGGTAGATGTGTTCCCAAAACATTT
AGATTCACAGACCTTAAGAAGGCATCTTCTTCTCATTATAATGAAGTTCAAAGAAATTTC
AAAATCTTGCATACACATTCAATGATGGAAGTATGTGTTTGAAACATCAGAAGTAGTTAA
CATAATACCATCAAAATAATGTAGAGGAGATCAAAGTTAACACCAAAGAACAATTATAAG
CAAGCATGACTTCAACCAAAAGAACACAACATAAATATGTATGCTCGTACACACATTTCT
AATTAAGTTGTAAAAGGTGTTGCTTTAACTTACGAGCCAGATTCTCAGTATCTTCATCAA
GTTTCCTGGTGTTCAAGGTCGTACTACTAGAGGCAGCCCTGTTTGAGCCAGCAGTTGCTG
CAATAGAAGATAGATATTGTAAGCACCAACAATCACTCAAAAAAAATTACGCACAAGTTT
ACTAATAGGAAAACCGGGCAACATAGAAATTGGGAAAAAAAAAGGAAGGGACTCTGGATG
GAAAGATTTGTGTGTCTGTGGGGGGTGGGGGAGCTCAAAAGAGAGTATTCAATAGAACTC
ATCATATTGCCATGCAAGGACCCTCATATTTGTAAAAGTTTACATTCTAACAACAAAGAA
TATATTCTAAAGTAACTGCAACGCACTGGAAAAATGTATATCAAAATCAAGAAATGTTAG
ATATGTGCCATCAAATATACCATCTCTACAAATAGGGAATTCATTTTCATTCACACCTTA
CGGTTTCTCGTAACCAGATTCAACTATAGATCTCCAGAATCAATGTAGATTGAAAGAAAC
TTCGAGTTTCAAATGAAAGAAGGTAGCATGATGCAATACAACAATTATTTAAATTCTAGT
ATGAAAGGATAGGAAGACACGTTTAAGGATTATACTTCTACTCAACTTTCTTAGTTACAT
GTGTACGCAAGAATATGGAAATTAGACCGGCACGGGAAGGATGATATAAGACTTCAATCT
ACACAAAATAAGCAGAAAACAGTTATTTCCAGCAACCGGAAGCTCTGATTCTCATGAAAA
TCAACAAGTTTGGTCTTCATAAGCAACCCTACACCACAGCAGAGATAATACACCAGTCCT
TAAGCTATCCATATACCAAGAAACATGTCAACTAAACAACGTACATACTTGAAATAGCTT
AAAATAGGCATGTACATCAATCAATCAAACAATCCTAACCAAAAAAAAATAAAAAATGAA
AACCCTAGCTGAAGACTTAGCATAATCGGACCTGCATATAGAAATAAGAAAATTAAGCAA
TACAAGAGCCAGCAACAATAATCGAGCTGAAAATCTCTATCGAAATAAAATTAACAGATT
ATACGATCAATCGAAGAAATGATTAAGCTAACGTTTATAGTTAGAACATCATCATATATA
TGAGCTTTGTAGAGATGAAAAAAACGAAGCAGCGACGAGAATACGAACATTTTCTGATAG
TTTCGATCTCAGCACCGGAGCGACGGGCAGCGTTGACAGCTTTCTCATCCTTGCGTGCGG
CGGCGGTCGGTGCCTTCTTCCGGATCACCACCGGCTCCCAGTCTTGTGATAATCCTCCAC
TCATATTTTTTTTTTCTTTGCTCGAAAAATCTCTCTCTTGCTTCTCTTCGCTTTGTTATT
ACGCTTCGAAATTATATTCCATTTCTGTGCAACCCTTTATATATAGACAGATACTAATA