Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g062130.3.1
CDS Infomation	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (AHRD V3.3 *** RHM1_ARATH)
Sequence	ATGTCTAACTATACACCAAAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCT CATGTTGCCAACCGCCTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAG CTTGATTATTGCTCAAACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAG TTTGTTAAGGGAGATATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAAC ATTGACACTATAATGCACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGC TTTGAGTTCACCAAGAACAACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTT ACTGGTCAGATCAGAAGGTTTATACATGTTAGCACTGATGAGGTTTACGGAGAGACTGAT GAAGATGCTGTTGTAGGAAATCATGAAGCATCGCAACTTCTCCCCACAAACCCATATTCA GCCACGAAAGCTGGAGCTGAAATGCTTGTTATGGCATATGCAAGATCATATGGATTGCCT GTTATCACCACTAGAGGGAACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATC CCAAAGTTCATACTTTTAGCTTTGAATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCA AATGTTAGAAGTTATCTCTATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCAC CGAGGTGATGTTGGTCATGTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGAT GTTGCCAAAGATATATCCAATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTG GAAAACAGGCCCTTCAATGACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTG GGTTGGTCCGAGAAGACCACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTC AATAATCCTGATTGGTGGGGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTG ATGATGCCTGGTGGGGTAGAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCA TCTGAGATCTCAGGAAACATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGC AACTCCCCTAGTAGATCACCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGT GGTCTCCTAAGCAAACTGTGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGT CTGGAGGATCGCTCACAACTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTC AATGCTGCTGGTGTCACTGGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAA ACAATCCGTACAAATGTTGCTGGAACTCTAAACTTGGCAGATGTTTGTAAAGAGAATGGT TTACTGATGATGAATTTTGCAACCGGTTGCATATTCGAATATGATGCTGCACACCCCGAA GGTTCTGGCATTGGATTCAAAGAGGAAGACACGCCCAATTTCACCGGTTCTTTCTATTCA AAGACCAAGGCCATGGTTGAAGAGTTGTTGAAAGAGTACCCCAATGTTTGCACCCTTAGA GTCAGGATGCCAATTTCTTCAGACCTCAACAACCCCCGTAACTTCATCACCAAGATTAGC CGCTACAATAAAGTGGTCAACATTCCCAACAGCATGACGATTTTGGATGAGCTTCTTCCA ATTTCAATCGAGATGGCAAAGCGTAATCTCACAGGCATATGGAATTTCACAAACCCTGGT GTTGTGAGCCATAACGAGATCTTGGAGATGTACAAGAAATACATAAACCCAGAATTTAAA TGGTCCAACTTCACACTGGAAGAGCAGGCTAAGGTAATTGTTGCACCTCGCAGTAACAAT GAAATGGACGCGTCCAAGTTGAAAAAGGAGTTCCCTGAGTTGTTGTCTATCAAAGAATCA TTGATCAAAAATGTGTTTGAACCAAATAGAAAAACTTCTGCATGA

Peptide Sequence

PEP ID	Solyc07g062130.3.1
PEP Infomation	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (AHRD V3.3 *** RHM1_ARATH)
Sequence	MSNYTPKNILITGAAGFIASHVANRLVRSYPDYNIVVLDKLDYCSNLKNLSPSRSSPNFK FVKGDIGSADLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYARSYGLP VITTRGNNVYGPNQFPEKLIPKFILLALNGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH RGDVGHVYNIGTKKERRVIDVAKDISNLFNKDPDTSIQFVENRPFNDQRYFLDDQKLKNL GWSEKTTWEEGLKKTMEWYVNNPDWWGDVSGALLPHPRMLMMPGGVERNSDGAEKDDSGS SEISGNMKLNGMVVPASKISNSPSRSPYKFLIYGRTGWIGGLLSKLCEKQGIPYEYGKGR LEDRSQLLSDIHAVKPTHVFNAAGVTGRPNVDWCESHKTETIRTNVAGTLNLADVCKENG LLMMNFATGCIFEYDAAHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYPNVCTLR VRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLTGIWNFTNPG VVSHNEILEMYKKYINPEFKWSNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKES LIKNVFEPNRKTSA*

Transcript Sequence

Transcript ID	Solyc07g062130.3.1
Transcript Infomation	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 (AHRD V3.3 *** RHM1_ARATH)
Sequence	TTCCATTTTATTATTTTCTGGTAAAAAATATGGAGATGGTGATTTGATTTTTTTTTGCAT GAGAGAGGGTTTTTGCGGGTATAAATACACAAACAACAAGATACTTGACTCTCATCAATA CACGCTTTCTCTCTCTAAAAAATCTTTTACGTTTCTCACTCTCTGTGAGAAACTCAAAAA TCTGTATCCATATTTTTACATATTGGGTTCTGAAACAAAAAAAATAATCAAAAACGGGTT TAAGTTGCTGTTAAGCTCTGAATATATTTGATCGACATCAAAATGTCTAACTATACACCA AAGAATATACTCATTACTGGGGCCGCAGGGTTTATTGCATCTCATGTTGCCAACCGCCTT GTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCAAAC CTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGATATT GGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATGCAC TTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAATAGCTTTGAGTTCACCAAGAAC AACATTTATGGCACACACGTGCTATTAGAGGCATGCAAAGTTACTGGTCAGATCAGAAGG TTTATACATGTTAGCACTGATGAGGTTTACGGAGAGACTGATGAAGATGCTGTTGTAGGA AATCATGAAGCATCGCAACTTCTCCCCACAAACCCATATTCAGCCACGAAAGCTGGAGCT GAAATGCTTGTTATGGCATATGCAAGATCATATGGATTGCCTGTTATCACCACTAGAGGG AACAATGTGTATGGTCCCAATCAATTTCCTGAGAAGCTAATCCCAAAGTTCATACTTTTA GCTTTGAATGGGAAGCCTCTTCCGATTCACGGAGATGGTTCAAATGTTAGAAGTTATCTC TATTGTGAGGACGTTGCTGAGGCTTTCGAAGTTGTTCTTCACCGAGGTGATGTTGGTCAT GTTTATAACATCGGGACTAAGAAAGAGAGGCGAGTGATTGATGTTGCCAAAGATATATCC AATCTTTTTAACAAGGATCCAGACACAAGCATTCAGTTTGTGGAAAACAGGCCCTTCAAT GACCAGAGGTATTTCCTAGATGATCAGAAGTTGAAGAACCTGGGTTGGTCCGAGAAGACC ACCTGGGAAGAGGGTCTGAAAAAAACCATGGAGTGGTATGTCAATAATCCTGATTGGTGG GGAGATGTCTCTGGGGCATTGCTTCCCCATCCTAGAATGCTGATGATGCCTGGTGGGGTA GAGAGAAATTCGGATGGAGCTGAAAAAGATGATTCTGGATCATCTGAGATCTCAGGAAAC ATGAAACTTAACGGAATGGTAGTTCCAGCTTCCAAGATCAGCAACTCCCCTAGTAGATCA CCTTATAAGTTTTTGATTTATGGTAGAACTGGGTGGATTGGTGGTCTCCTAAGCAAACTG TGTGAGAAACAGGGAATTCCTTATGAGTATGGAAAGGGACGTCTGGAGGATCGCTCACAA CTTTTGTCAGACATTCATGCTGTGAAGCCCACACATGTATTCAATGCTGCTGGTGTCACT GGTAGGCCCAATGTTGATTGGTGTGAGAGTCATAAGACTGAAACAATCCGTACAAATGTT GCTGGAACTCTAAACTTGGCAGATGTTTGTAAAGAGAATGGTTTACTGATGATGAATTTT GCAACCGGTTGCATATTCGAATATGATGCTGCACACCCCGAAGGTTCTGGCATTGGATTC AAAGAGGAAGACACGCCCAATTTCACCGGTTCTTTCTATTCAAAGACCAAGGCCATGGTT GAAGAGTTGTTGAAAGAGTACCCCAATGTTTGCACCCTTAGAGTCAGGATGCCAATTTCT TCAGACCTCAACAACCCCCGTAACTTCATCACCAAGATTAGCCGCTACAATAAAGTGGTC AACATTCCCAACAGCATGACGATTTTGGATGAGCTTCTTCCAATTTCAATCGAGATGGCA AAGCGTAATCTCACAGGCATATGGAATTTCACAAACCCTGGTGTTGTGAGCCATAACGAG ATCTTGGAGATGTACAAGAAATACATAAACCCAGAATTTAAATGGTCCAACTTCACACTG GAAGAGCAGGCTAAGGTAATTGTTGCACCTCGCAGTAACAATGAAATGGACGCGTCCAAG TTGAAAAAGGAGTTCCCTGAGTTGTTGTCTATCAAAGAATCATTGATCAAAAATGTGTTT GAACCAAATAGAAAAACTTCTGCATGAGAAGCCCATCAGGATGTGGAGAGCAGACTTCTG GTTTGGATCAATATGCTACTTGACTTTCTACTCTAGTTTAGTCATTATTAGCCATCATTT TAAAATATTTAGGTTCTTACTGGTGTCTAGAATTCCTACACTTGGTCTATGTTGTCAGTT TATTTATGAGTTTAATGTGCTATAAGGTGGTTTGCGTAGGAGTTACCATTCATCTTTTAT CAGCTCGGGTCGATTTGTTGGATCTTAATATATATGAAATTATGATTTGTTTCTTGCTCC ATTTGTGTTGTGCTAGTTTCCTTCACATATTGTCATATTGATTGGGAAGTAGCTTTGTGT TTTGCCAGTATTCTTTAGGCAGATGGCATGTATAGAAACATTTCTGTTGAGCTCCAGCAG TAAACAATGTAAGGCCATATTTAGTTTGAATTGTTCTTATTTAGTTTTGTAAACGTATAA CATACCCTGTGTAATCCCAAGAGTTTGGATTCGGCCTTCTGCGGTATCTGATGGTGACTC CAAATATAGCTTGTGATTTGAGTTGCTTGGTTCTGTCCGCTTCAATTTGTTCGTCTCACT TTCTCTTTCCGACTACATAATCCAAAGTTTCTTAATTTTCTTAAAATTTCGTGCCAAAGT AAAAGACTAGACAAAATAATTGGCACGGATGTACTAGCTA