Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g061780.3.1
CDS Infomation	Ubiquitin carboxyl-terminal hydrolase 15-like protein (AHRD V3.3 *** A0A0B0MG64_GOSAR)
Sequence	ATGCTCGAGCCAAGGGAAACCGACATTCCGACTTTATTTTTGGTCTTGGTTGTGCTTCCC CTGGTTTCTTATATTCTTCTAGGAAAATGGAATGAGGCAGCCAAAAAGAAAGAAAGAGTT GGTTTGCTGGCTCAACGGGCTGCTGAAGAAGCACATAAGACACAAACTATGTCTGCAGTA AGTATTACCCCTATCCCTCTTGTGCCTTTGCCAAGCAGTGCAACTCATCAGTGTGCAAGA TGCCATAGTCCAGCCACAACTCGCTGCTCTCAATGCAAATCTGTTCGATATTGCTCAGGG AAGTGTCAGATTCTCCATTGGAGACAGGTTCACAAGCTAGAGTGTCTTCAATTGGGTAAT AACTGCAATAGCTCATCCTCTAAGCCTGCCTTGACTGATGAACTCCCGGGACGCATGTCA TTTGATAGCTATGTTGAAGCGCAGTACAGCGACAACAACCTGAATCAGTTGTGGCTTGGC AAAACTTCTCCAGATGGGGTGACTGAAACACCCATTGTCACCCCAGTTGCCCCTATTACT GTTAGTGTGGCAACGAATACATCAGGATCTCCAAAAGTTGGGAGACGATCTGTAGACAAG AGAGTACATAAAGGCAACAGAGACATATTAAGAAGAGGGGACGGAACCATGTCTGAGAGT TCTGAACGAGCCTCTCAATCTAGGTCAAGAGATGGTGATTCCATGCTTTCGGAACATGAT AGCATCGCGGATGGGTTCATTAGTGAACATACTGATTTGATGAATACAATGGGAGAACGC CATATGTTACAAAAGCAGAAAGAACACATCTCAAGAAATCATCGTCATGTTTCAAGTTCA TCGAATCTAGAAGGCCATGAAACAAATGCATGCAAGAATCAGAAGGAGCTGATTGATGAA AAAAGCCTTACACGAGAAGGCGTCGTTACCGGCACTCCGGCAATTCCATTAAACTGTTCT TCTGGAAAGACCTCTACAAGAAGAAGCAGTAGGGCTAAAAGTGCATCACCTTCTCCAGGA ACAAAGTCCCATAGGACGCCAAAAACATCAAGAGAAGAAATGTGTTCAGGTTTGGAAGGG AAGGGACTGAATATTGATGAGTCAAAAAATGCTAGAAGAAAGGATGCAGTCCCTCCACAA GCAGGCAGTGGTGTTGCAAACTTGGGAATTATGAGAATGTTTGGTCTGGCTAAATCATCA AAAGTTGTCGGACATCAATCATTAGAATCCAGGGCTGACAAACAAAAGAAACTAAAGATG CTGTTTCCTTATGAAGAGTTTGTGAAGTTATTTGAATACGAAGACTTCACTTTGTTGCCT AGAGGTCTCATAAATTGCGGGAATAGGAAAGATTGGTGCCTTGTGTGTGAACTTGAGCAA CATGCGATGATGTTAAGAGAAAGTGGAGGTCCTCTGTCACCAAACAAGATTCTTTTGCAT ATGCGGAGCATTAATGGTCAGATTGGAAATGGCAGTCAGGAAGATGCTCATGAGTTTTTA AGGTTTATTGTTGCTTCTATGCAATCTATAAGTTTGGAGGCATTAGGTGGAGAAAATGCT GTTGATCCAAGATTGCAGCAAACAACCTTTATACAACACACTTTCGGAGGAAGACTTAGA TCTAAGGTCAAGTGTCTGAGATGCCACCATGAATCGGCGTGCTATGAAAATATCATGGAT CTCTCATTGGAGATCTTCGGTTGGGTTGAGTCACTTGAAGATGCATTGACACAGTTTACA AGCCCGGAAGATCTTGATGGGGAAAATATGTATAGATGTGGAAGGTGTGCTTGTTATGTC CGTGCACAAAAACAGTTGAGCATACAGGAGGCTCCAAATATCTTAACGATTGTCTTGAAG AGATTTCAGGAAGGAAGTTATGGGAAGATAAATAAGTGCATCACATTTCCGGATATGTTG GATATGATCCCATTTATGACCGGGACAGATGACATTCCTCCACTTTACATGCTTTATGCT GTTGTTGTGCACTTGGATACCTTAAATGCATCATTTTCTGGGCATTACATATCCTACGTG AAGGATCTACACCTACGAGGCAATTGGTTCAGGATTGACGATACTGAGTCCTCCCATGAG AACTATAGCGAAGATAGCAAGAGACGTGCTACTTCCAGACGTATCAGATCAACTTTTTTT ACTGATAATAAAGGTAGTAGAGCAAGGGACAATGTACACCCTGTATCTATGAGCCAGGTG ATGTCGGAAGGAGCATATATCTTATTTTATAAGAGATCATCTCCACGGCCAGCAAGGAAG ATTAGCCGAAGACAAGTTCCTGGAATTGTCAAGCACTGCCCACCAAAATCGACAAAGACT TCTAGGCCAGAGCAGACAAAAGCGGAGCATCTTTATGTTGGTGTGGATCCTTATATGAAT CATAGGCCAGAAATGAACAGTGACATAATTGATTGCACCTCCGGTGGACTCGTCAAGAAC GCTAATAGAAATAGACCGCCGGTTGTGGGAACCTATACTGAGTCAATGACTGCAGAGTTC TCTGATGCTACATCAAGTGATTGGTCCCTCTTTACAAGCTCAGATGAAGCATCATTTACT ACTGAGAGTACCAGATACTCTTTTAGTACTGTTGACTATGGAGATGCAAACGCTGCTGAT CCGTTCTCTTCCATCATCAACAGCTTATGTGGATCAGATTATTCATCTAACAGAACAGTG GCGTGTAGTATGTTTTCAAGTAGTAAACCGCATACAAGATTCTTTTCAGAAAGTAAGGGT TCTGTTTTGGATTCAACTGCTGGGACTAGCATACCGAGACAGGTTACTGTTCCTTATTCT GAAGGTTTTCATAGTGATAGTAGTAACCATGTACATGTAGAATATGGTAGTGAGCCTAGA TATGAACAAACTTACTATCCATATAATGTGTAG

Peptide Sequence

PEP ID	Solyc07g061780.3.1
PEP Infomation	Ubiquitin carboxyl-terminal hydrolase 15-like protein (AHRD V3.3 *** A0A0B0MG64_GOSAR)
Sequence	MLEPRETDIPTLFLVLVVLPLVSYILLGKWNEAAKKKERVGLLAQRAAEEAHKTQTMSAV SITPIPLVPLPSSATHQCARCHSPATTRCSQCKSVRYCSGKCQILHWRQVHKLECLQLGN NCNSSSSKPALTDELPGRMSFDSYVEAQYSDNNLNQLWLGKTSPDGVTETPIVTPVAPIT VSVATNTSGSPKVGRRSVDKRVHKGNRDILRRGDGTMSESSERASQSRSRDGDSMLSEHD SIADGFISEHTDLMNTMGERHMLQKQKEHISRNHRHVSSSSNLEGHETNACKNQKELIDE KSLTREGVVTGTPAIPLNCSSGKTSTRRSSRAKSASPSPGTKSHRTPKTSREEMCSGLEG KGLNIDESKNARRKDAVPPQAGSGVANLGIMRMFGLAKSSKVVGHQSLESRADKQKKLKM LFPYEEFVKLFEYEDFTLLPRGLINCGNRKDWCLVCELEQHAMMLRESGGPLSPNKILLH MRSINGQIGNGSQEDAHEFLRFIVASMQSISLEALGGENAVDPRLQQTTFIQHTFGGRLR SKVKCLRCHHESACYENIMDLSLEIFGWVESLEDALTQFTSPEDLDGENMYRCGRCACYV RAQKQLSIQEAPNILTIVLKRFQEGSYGKINKCITFPDMLDMIPFMTGTDDIPPLYMLYA VVVHLDTLNASFSGHYISYVKDLHLRGNWFRIDDTESSHENYSEDSKRRATSRRIRSTFF TDNKGSRARDNVHPVSMSQVMSEGAYILFYKRSSPRPARKISRRQVPGIVKHCPPKSTKT SRPEQTKAEHLYVGVDPYMNHRPEMNSDIIDCTSGGLVKNANRNRPPVVGTYTESMTAEF SDATSSDWSLFTSSDEASFTTESTRYSFSTVDYGDANAADPFSSIINSLCGSDYSSNRTV ACSMFSSSKPHTRFFSESKGSVLDSTAGTSIPRQVTVPYSEGFHSDSSNHVHVEYGSEPR YEQTYYPYNV*

Transcript Sequence

Transcript ID	Solyc07g061780.3.1
Transcript Infomation	Ubiquitin carboxyl-terminal hydrolase 15-like protein (AHRD V3.3 *** A0A0B0MG64_GOSAR)
Sequence	TTAAAGTGTGAGAATGCCAGAATAGGGGGTTTTGAGGTGTGAAGTGAGGCAAATGTAGAG CATGAGCTGCTGTTTTAGTTTATGTTATGTTCTTACCAACTAAGGAATCAAAGAATCTTT GTTGGGTTTTAGAGTTGTAGAGAAACAAGAAGAAGAAAAAAACACCTATAAGGGTTAAAC TGGTCTTTTAGATTTTATCAATCAAAGGAAAAAAAGGTTTTAGACTTGTAGAGAAAAAAG AAGAAAAGGAAGACCTAGAAGGATCAAACAACAGAGTGTCGTGGTCCCATTGGTCTTTTG GATTTTATCCATCAAATTAAAAAAGATAATGTGGTGCTGGTGCTGGAATCATCTAACAAG AACATTACAAAATTGTGCTGCTGGTTTACTTTGGCTTTTGTAGCTTGGTAGATCAGGCTG CAACTTGAAGTTTAGTTAGATAGTTGGACATGAATTTGCTGGTGAGAACATGCTCGAGCC AAGGGAAACCGACATTCCGACTTTATTTTTGGTCTTGGTTGTGCTTCCCCTGGTTTCTTA TATTCTTCTAGGAAAATGGAATGAGGCAGCCAAAAAGAAAGAAAGAGTTGGTTTGCTGGC TCAACGGGCTGCTGAAGAAGCACATAAGACACAAACTATGTCTGCAGTAAGTATTACCCC TATCCCTCTTGTGCCTTTGCCAAGCAGTGCAACTCATCAGTGTGCAAGATGCCATAGTCC AGCCACAACTCGCTGCTCTCAATGCAAATCTGTTCGATATTGCTCAGGGAAGTGTCAGAT TCTCCATTGGAGACAGGTTCACAAGCTAGAGTGTCTTCAATTGGGTAATAACTGCAATAG CTCATCCTCTAAGCCTGCCTTGACTGATGAACTCCCGGGACGCATGTCATTTGATAGCTA TGTTGAAGCGCAGTACAGCGACAACAACCTGAATCAGTTGTGGCTTGGCAAAACTTCTCC AGATGGGGTGACTGAAACACCCATTGTCACCCCAGTTGCCCCTATTACTGTTAGTGTGGC AACGAATACATCAGGATCTCCAAAAGTTGGGAGACGATCTGTAGACAAGAGAGTACATAA AGGCAACAGAGACATATTAAGAAGAGGGGACGGAACCATGTCTGAGAGTTCTGAACGAGC CTCTCAATCTAGGTCAAGAGATGGTGATTCCATGCTTTCGGAACATGATAGCATCGCGGA TGGGTTCATTAGTGAACATACTGATTTGATGAATACAATGGGAGAACGCCATATGTTACA AAAGCAGAAAGAACACATCTCAAGAAATCATCGTCATGTTTCAAGTTCATCGAATCTAGA AGGCCATGAAACAAATGCATGCAAGAATCAGAAGGAGCTGATTGATGAAAAAAGCCTTAC ACGAGAAGGCGTCGTTACCGGCACTCCGGCAATTCCATTAAACTGTTCTTCTGGAAAGAC CTCTACAAGAAGAAGCAGTAGGGCTAAAAGTGCATCACCTTCTCCAGGAACAAAGTCCCA TAGGACGCCAAAAACATCAAGAGAAGAAATGTGTTCAGGTTTGGAAGGGAAGGGACTGAA TATTGATGAGTCAAAAAATGCTAGAAGAAAGGATGCAGTCCCTCCACAAGCAGGCAGTGG TGTTGCAAACTTGGGAATTATGAGAATGTTTGGTCTGGCTAAATCATCAAAAGTTGTCGG ACATCAATCATTAGAATCCAGGGCTGACAAACAAAAGAAACTAAAGATGCTGTTTCCTTA TGAAGAGTTTGTGAAGTTATTTGAATACGAAGACTTCACTTTGTTGCCTAGAGGTCTCAT AAATTGCGGGAATAGGAAAGATTGGTGCCTTGTGTGTGAACTTGAGCAACATGCGATGAT GTTAAGAGAAAGTGGAGGTCCTCTGTCACCAAACAAGATTCTTTTGCATATGCGGAGCAT TAATGGTCAGATTGGAAATGGCAGTCAGGAAGATGCTCATGAGTTTTTAAGGTTTATTGT TGCTTCTATGCAATCTATAAGTTTGGAGGCATTAGGTGGAGAAAATGCTGTTGATCCAAG ATTGCAGCAAACAACCTTTATACAACACACTTTCGGAGGAAGACTTAGATCTAAGGTCAA GTGTCTGAGATGCCACCATGAATCGGCGTGCTATGAAAATATCATGGATCTCTCATTGGA GATCTTCGGTTGGGTTGAGTCACTTGAAGATGCATTGACACAGTTTACAAGCCCGGAAGA TCTTGATGGGGAAAATATGTATAGATGTGGAAGGTGTGCTTGTTATGTCCGTGCACAAAA ACAGTTGAGCATACAGGAGGCTCCAAATATCTTAACGATTGTCTTGAAGAGATTTCAGGA AGGAAGTTATGGGAAGATAAATAAGTGCATCACATTTCCGGATATGTTGGATATGATCCC ATTTATGACCGGGACAGATGACATTCCTCCACTTTACATGCTTTATGCTGTTGTTGTGCA CTTGGATACCTTAAATGCATCATTTTCTGGGCATTACATATCCTACGTGAAGGATCTACA CCTACGAGGCAATTGGTTCAGGATTGACGATACTGAGTCCTCCCATGAGAACTATAGCGA AGATAGCAAGAGACGTGCTACTTCCAGACGTATCAGATCAACTTTTTTTACTGATAATAA AGGTAGTAGAGCAAGGGACAATGTACACCCTGTATCTATGAGCCAGGTGATGTCGGAAGG AGCATATATCTTATTTTATAAGAGATCATCTCCACGGCCAGCAAGGAAGATTAGCCGAAG ACAAGTTCCTGGAATTGTCAAGCACTGCCCACCAAAATCGACAAAGACTTCTAGGCCAGA GCAGACAAAAGCGGAGCATCTTTATGTTGGTGTGGATCCTTATATGAATCATAGGCCAGA AATGAACAGTGACATAATTGATTGCACCTCCGGTGGACTCGTCAAGAACGCTAATAGAAA TAGACCGCCGGTTGTGGGAACCTATACTGAGTCAATGACTGCAGAGTTCTCTGATGCTAC ATCAAGTGATTGGTCCCTCTTTACAAGCTCAGATGAAGCATCATTTACTACTGAGAGTAC CAGATACTCTTTTAGTACTGTTGACTATGGAGATGCAAACGCTGCTGATCCGTTCTCTTC CATCATCAACAGCTTATGTGGATCAGATTATTCATCTAACAGAACAGTGGCGTGTAGTAT GTTTTCAAGTAGTAAACCGCATACAAGATTCTTTTCAGAAAGTAAGGGTTCTGTTTTGGA TTCAACTGCTGGGACTAGCATACCGAGACAGGTTACTGTTCCTTATTCTGAAGGTTTTCA TAGTGATAGTAGTAACCATGTACATGTAGAATATGGTAGTGAGCCTAGATATGAACAAAC TTACTATCCATATAATGTGTAGTTTCTTGAAATTCCAAATCATTATATGTCGAATTAGCT AGGTACAAGCTGTGCTTCTGTTTTGCTAATCAATATTTTATTGAATGGAAGCACATCAAT CATTTTCTAGTTCAATGGAACAACTGGTCATTTTTTGTTATTTTGCAGTTGTAAATATGC TTGCTGTAGCTAATTATCTTGATTCTTTACAATCTGTATGTTAAATAATCAGCGTAGTTA TGAA