Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g061720.3.1
CDS Infomation

gibberellin 2-oxidase 4
Sequence

ATGGTGGTCTTAACAAAACCTGCCATTACTCACTTCCCTATAGTGAAAAACTCTTTCAAA
TCACCCTCTTACATCAATGATATCCCTGTAATAGACCTCTCTAAAGCCAACTCCAAGAAC
CTCATCGTTAATGCCTGCGAAGAATTCGGATTCTTCAAAGTCATAAACCATGATGTTCCT
ATGGAATTCATAAGTAAACTCGAATCCGAAGCCGTTAAATTCTTCTCCTCTCCCCTCTCT
GAGAAACTAAAGGCAGGGCCTGCTGATCCTTTTGGTTATGGCAATAAGAAAATCGGACAA
AATGGCGATATCGGTTGGGTTGAATACATTCTCCTTTCAACAAATTCTGAATTCAATTAC
CAGAAATTCGCATCTGTATTAGGTGTCAATCCAGAAAACATTCGGGCTGCGGTGAATGAT
TATGTGTCATCAGTGAAGAAAATGTCATGTGAGATTCTTGAAAAGTTGGCGGAGGGATTA
AAGATTCAACCGACGAATGTTTTGAGTAAGCTATTGATGGATGAAAAGAGCGACTCTGTT
TTCAGGCTGAATCACTATCCTCCATGTCCTGATATTCAAGAATTCAATGCCAAAAATTTA
ATTGGATTTGGAGAACATACTGATCCACAAATCATGTCGATTTTAAGATCCAACAACACT
TCCGGTCTTCAAATTTTACTCAAAAATGGCAACTGGTTTTCTGTTCCATCTGATCAGAAT
TCTTTTTTCGTCAATGTTGGAGACTCATTACAGGTGATGACGAATGGAAGGTTTAAGAGT
GTGAAACATAGGGTGTTGACAAACAGTGTGAAATCAAGACTATCAATGATATATTTTGGA
GGACCACCATTGAGTGAAAAGATAGCACCATTGCCATCACTAATGGAAGGAAAAGACAGT
TTATACAAAGAGTTTACATGGTTTGAGTACAAAAAGTCAGCTTACAAGACTAGACTAGCT
GATAATAGGTTGGTCCTATTTGAGAAAAGTTTATAA

Peptide Sequence

PEP ID

Solyc07g061720.3.1
PEP Infomation

gibberellin 2-oxidase 4
Sequence

MVVLTKPAITHFPIVKNSFKSPSYINDIPVIDLSKANSKNLIVNACEEFGFFKVINHDVP
MEFISKLESEAVKFFSSPLSEKLKAGPADPFGYGNKKIGQNGDIGWVEYILLSTNSEFNY
QKFASVLGVNPENIRAAVNDYVSSVKKMSCEILEKLAEGLKIQPTNVLSKLLMDEKSDSV
FRLNHYPPCPDIQEFNAKNLIGFGEHTDPQIMSILRSNNTSGLQILLKNGNWFSVPSDQN
SFFVNVGDSLQVMTNGRFKSVKHRVLTNSVKSRLSMIYFGGPPLSEKIAPLPSLMEGKDS
LYKEFTWFEYKKSAYKTRLADNRLVLFEKSL*

Transcript Sequence

Transcript ID

Solyc07g061720.3.1
Transcript Infomation

gibberellin 2-oxidase 4
Sequence

CTAAATTTTCATCACTACACAGCTAAGTTCCTACAGTTATAATAACAAACAACAATTTCT
ACCAAAGTTTTTCAAATTCTAAATTTCATCAAAAAAACAACAACAATGGTGGTCTTAACA
AAACCTGCCATTACTCACTTCCCTATAGTGAAAAACTCTTTCAAATCACCCTCTTACATC
AATGATATCCCTGTAATAGACCTCTCTAAAGCCAACTCCAAGAACCTCATCGTTAATGCC
TGCGAAGAATTCGGATTCTTCAAAGTCATAAACCATGATGTTCCTATGGAATTCATAAGT
AAACTCGAATCCGAAGCCGTTAAATTCTTCTCCTCTCCCCTCTCTGAGAAACTAAAGGCA
GGGCCTGCTGATCCTTTTGGTTATGGCAATAAGAAAATCGGACAAAATGGCGATATCGGT
TGGGTTGAATACATTCTCCTTTCAACAAATTCTGAATTCAATTACCAGAAATTCGCATCT
GTATTAGGTGTCAATCCAGAAAACATTCGGGCTGCGGTGAATGATTATGTGTCATCAGTG
AAGAAAATGTCATGTGAGATTCTTGAAAAGTTGGCGGAGGGATTAAAGATTCAACCGACG
AATGTTTTGAGTAAGCTATTGATGGATGAAAAGAGCGACTCTGTTTTCAGGCTGAATCAC
TATCCTCCATGTCCTGATATTCAAGAATTCAATGCCAAAAATTTAATTGGATTTGGAGAA
CATACTGATCCACAAATCATGTCGATTTTAAGATCCAACAACACTTCCGGTCTTCAAATT
TTACTCAAAAATGGCAACTGGTTTTCTGTTCCATCTGATCAGAATTCTTTTTTCGTCAAT
GTTGGAGACTCATTACAGGTGATGACGAATGGAAGGTTTAAGAGTGTGAAACATAGGGTG
TTGACAAACAGTGTGAAATCAAGACTATCAATGATATATTTTGGAGGACCACCATTGAGT
GAAAAGATAGCACCATTGCCATCACTAATGGAAGGAAAAGACAGTTTATACAAAGAGTTT
ACATGGTTTGAGTACAAAAAGTCAGCTTACAAGACTAGACTAGCTGATAATAGGTTGGTC
CTATTTGAGAAAAGTTTATAATAACGGTGTATATAACTTAAACTCTTTGAGAAAATAGTT
ACATCTAAAGATCCGACTCTTTAGGAAGGACTCGTTATGTTGAAAATGATGTTTTAAGGT
AGTAATTTAAAGTTATTATCATTATATTAACACCTAGGGCTTATGAGTTTTTTTTTTTAT
ATTCGTATCTCACTTTACCTCTCTAGTATTCGTTGTTTAGACATGGGCATATGTAAAATA
TTATAAGGCCTATGGGATTATGCATTTTAAAATTGAATGTGAATAATTTAAAAATAAGGA
ATCAGGCTTATGTACGCGTCCCTCTTCAACGAAATAAAATTAAATTGCTTGAGCTAAGGA
CCTCGTATTGCTAGGACATTATGAGAATGGCACTACGAGTCAAGGCTCATGTCATTACAC
TATGTGCCATCACATGGACTATAGTAGGAAGGCCACTTAGATCAATAAAGAAAAATAAAT
TTTAAAATATCGACTGACTGAATCACACTCACTTATTTAGAATGATGATGTAAGTATTAT
TG