Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g056660.3.1
CDS Infomation	Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)
Sequence	ATGGTGCACAGTGCCTACGATTCTTTCGAACTTCTCAATAGTTGTCCGACGAAAATCGAT GCTGTCGAGTCTTATGGTTCAAATTTGCTTGTTGCTTGTTCCGATGGATCCCTCCGTGTT TATGGTCCTGAATCCTCCGTTCCCGGTCAATCTCCGCCGGCCGATTACCACAACCAGAAC TTAGGGCTTCAGCAGGAACGATATGTGCTTGAAAGAACTGTGAATGGATTCTCCAGAAGA CAAATGCTGGCTATGGAAGTCCTTGTCTCAAGAGAACTCCTGCTTTCCCTTTCGGAGTCT ATTGCCTTCCATAGGTTGCCTAATTTGGAGACTTTAGCTGTGATTACTAAGGCTAAAGGT GCAAATGTGTATTCGTGGGATGATAAAAGGGGGTTTTTATGCTTTGGGAGGCAGAAGAGG GTTTGTATCTTCAGACATGATGGGGGGAGAGGATTTGTGGAGGTGAAAGAATTTGGAGTT CCTGACACAGTCAAGTCGATGTCTTGGTGTGGTGAGAATATCTGCTTGGGGATTAGAAGA GAGTACATGATATTGAATACTACCAATGGTGCATTGTCTGAGGTGTTTCCTTCGGGGAGG ATCGCCACACCTCTTGTGGTGCCTCTTCCCTCTGGAGAACTTCTTTTGGGCAAGGATAAT ATTGGTGTCTTAGTTGACCAAAATGGAAAGTTGATCCAAGAGGGCAGGGTTTGTTGGTCA GAGGCTCCTGCAATTGTTGTTGTTCAGAAGCCCTATGCCATAGGTCTTTTACCGCGACAT GTTGAGATACGCTCTCTTCGTGTTCCTTATCCTTTGATTCAAACAGTTGTCCTTCGGAAT GTTCGTCGTCTTGTTCGAAGCAACAATGCTGTCATTGTTGCTCTTGATAATTCTGTTTTT GGATTTTTCCCTGTTCCTCTCGGTGCACAGATTGTACAACTAACAGCCTCTGGAAACTTT GAGGAGGCCTTGGCTTTGTGCAAATTGCTACCACCAGAAGATTCAAGTCTTAGATCTGCA AAGGAGCAATCAATTCATATAAGATATGCACACTTCCTGTTTGAAAATGGGAGCTATGAA GAAGCAATGGAACATTTTCTGGCATCTCAAGTTGAACTCACTTATGTGCTTGCCTTATAT CCATCCATTATTGTTCCAAAATCATCTTTCATACCTGAACCACAGAAATTTGTGGAAGTT GGGGATGCACCGTATCTCTCCCGAGCTTCCTCTGGTCTGTCAGATGATCTGGATTCTACG CCTTCACATGTCTTAGAATCTGATGAAATGGATATAGAATCCAAAAAAATGAGTCACAAC ACTTTGATGGCTCTGATTAAGTATTTACAGAAGAGAAGATACAGTGTTGTTGAGAAAGCC ACAACTGAGGGCACTGAAGAGGTCGTTTCAGATGCTGTCGGAGATAATTTCATTTCTTAT GGAACTAGCCGGTCCAAAAAACCAACCAAGGGCAGAATTCATGCTCCAATCACTTCCATC GCTAGGGATATGGCTGCAATACTGGACACTGCACTTCTTCAAGCTCTTATATTAACTGGA CAGTTCTCAGCAGCTACAGATTTTCTGAAAGTCCTCAACTACTGTGATGTGAAAATATGT GAGGAGTTCCTGCAAAAAAGAAGCCAGTATGCTTGTCTGCTAGAACTTTATAGGAGCAAT TCAATGCATCGTGAAGCACTTAAACTTCTCCATCAATTGGTAGAAGAGTCCAAGTCAGAG CAAACTCCTGTAGAGCTCTCATTGAAGTTCAAGCCTGATATGGTCATTGAATATCTCAAA CCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCCGTTCTTGAAAGC TGTCCTATGCAAACCATTGAGCTATTCTTGTCTGGTAATATTCCAGCGGACTTGGTGAAT TCTTACTTAAAACAGCATGCTCCAAACATGCAGGCAACATATCTGGAACTCATGCTTGCC ATGAATGAAAATAGCATCTCCGGGAATCTGCAGAATGAAATGAAAAGCTATGAAAGAAAT ACTGCTGCTAGTGAAGTGAGAAAGCTGAGGCTTTTAAGTTTCTCCTCTTTGATATGTAAC TTGTGGCAGGTGCAAATTTATCTCTCAGAAGTGCTTGATTTGTATGCTGAACTTAGTTCC CAGCAAAAATGGGATGAAAAAACATTTTCTCCAACAAGGAAAAAGCTTTTGTCTGCTTTG GAGAGTATATCCGGGTATAATCCAGAGGTGTTGCTTAAGAGACTTCCACCAGATGCTCTG TATGAAGAACGTGCACTTCTGTTGGGGAAAATGAATCAACATGAACTTGCGCTATCTATT TATGTGCACAAGCTTCATGTTCCTGAACTTGCACTGTCCTATTGTGATCGGGTGTACGAG TCAGGACTTCAACAACATTCCGCAAAATCTTATGGAAACATTTACCTGACTCTACTGCAA ATCTATCTCAATCCCATGAAGACAACAAAAAATTTTGAGAAGAAAATTACTAATCTGGTA TCATCTCAGAGCCCTGGGATTCCAAAAGTTGGTTCAGGAACTCCAGCAAAGGTAAAAGGA GGCCGCTTCAAGAAAATTGCTGAAATTGAGGGCGCTGAGGACACTCGATTCAGTCCAAGT GGCACTGACAGTGGTAGGAGCGATGGAGATACAGAAGATGCTGCCGAGGAAGGAGATTCT ACTATTATGCTAGATCAGGTGCTGGATCTTTTGAGCAAAAGGTGGGATCGGATCCATGGG GCCCAAGCTCTGAAACTACTACCAAGGGACACTAAACTACAGAACTTGCTTCCATTTCTT GGACCTCTCCTGAGAAAATCCAGTGAAGCGTATCGAAACTTTTCAGTGATAAAAAGCTTG AGAGAAAGTGAAAATCTACAGGTAAAAGATGAACTGTATAGTCAAAGAAAAGCAGTCTTG AAGATCACAAGTGATAGCATGTGTTCTCTTTGCAACAAGAAGATTGGCACCAGTGTCTTT GCAGTGTATCCTAATGGCAAGACAATTGTGCATTTTGTTTGCTTTAGAGATTCACAGAAT ATGAAGGCAGTTGGAAGAGGCTCTCAGTCAAGGAAAAGATGA

Peptide Sequence

PEP ID	Solyc07g056660.3.1
PEP Infomation	Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)
Sequence	MVHSAYDSFELLNSCPTKIDAVESYGSNLLVACSDGSLRVYGPESSVPGQSPPADYHNQN LGLQQERYVLERTVNGFSRRQMLAMEVLVSRELLLSLSESIAFHRLPNLETLAVITKAKG ANVYSWDDKRGFLCFGRQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRR EYMILNTTNGALSEVFPSGRIATPLVVPLPSGELLLGKDNIGVLVDQNGKLIQEGRVCWS EAPAIVVVQKPYAIGLLPRHVEIRSLRVPYPLIQTVVLRNVRRLVRSNNAVIVALDNSVF GFFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRSAKEQSIHIRYAHFLFENGSYE EAMEHFLASQVELTYVLALYPSIIVPKSSFIPEPQKFVEVGDAPYLSRASSGLSDDLDST PSHVLESDEMDIESKKMSHNTLMALIKYLQKRRYSVVEKATTEGTEEVVSDAVGDNFISY GTSRSKKPTKGRIHAPITSIARDMAAILDTALLQALILTGQFSAATDFLKVLNYCDVKIC EEFLQKRSQYACLLELYRSNSMHREALKLLHQLVEESKSEQTPVELSLKFKPDMVIEYLK PLCATDPMLVLEFSLPVLESCPMQTIELFLSGNIPADLVNSYLKQHAPNMQATYLELMLA MNENSISGNLQNEMKSYERNTAASEVRKLRLLSFSSLICNLWQVQIYLSEVLDLYAELSS QQKWDEKTFSPTRKKLLSALESISGYNPEVLLKRLPPDALYEERALLLGKMNQHELALSI YVHKLHVPELALSYCDRVYESGLQQHSAKSYGNIYLTLLQIYLNPMKTTKNFEKKITNLV SSQSPGIPKVGSGTPAKVKGGRFKKIAEIEGAEDTRFSPSGTDSGRSDGDTEDAAEEGDS TIMLDQVLDLLSKRWDRIHGAQALKLLPRDTKLQNLLPFLGPLLRKSSEAYRNFSVIKSL RESENLQVKDELYSQRKAVLKITSDSMCSLCNKKIGTSVFAVYPNGKTIVHFVCFRDSQN MKAVGRGSQSRKR*

Transcript Sequence

Transcript ID	Solyc07g056660.3.1
Transcript Infomation	Vacuolar sorting protein 39 (AHRD V3.3 *** AT4G36630.1)
Sequence	TTAAATAATAGAGTAATAATTATTTTGAATAAAAACAAGTAAAATAGGACGAGAAATAGT AAAGTTTAGACAAAATCCAAAAAGAGCGGGACAAAGCATATAACTGTAACAAATGCTCCA GTTGAGCATTATCATGTCAACACGACGTCGTTCTGCGTGGACTGTTGAACGGAGAGAAAT TTGATCGGAGAAGAAGAAGAAAGCTAAAAAAAAATGGTGCACAGTGCCTACGATTCTTTC GAACTTCTCAATAGTTGTCCGACGAAAATCGATGCTGTCGAGTCTTATGGTTCAAATTTG CTTGTTGCTTGTTCCGATGGATCCCTCCGTGTTTATGGTCCTGAATCCTCCGTTCCCGGT CAATCTCCGCCGGCCGATTACCACAACCAGAACTTAGGGCTTCAGCAGGAACGATATGTG CTTGAAAGAACTGTGAATGGATTCTCCAGAAGACAAATGCTGGCTATGGAAGTCCTTGTC TCAAGAGAACTCCTGCTTTCCCTTTCGGAGTCTATTGCCTTCCATAGGTTGCCTAATTTG GAGACTTTAGCTGTGATTACTAAGGCTAAAGGTGCAAATGTGTATTCGTGGGATGATAAA AGGGGGTTTTTATGCTTTGGGAGGCAGAAGAGGGTTTGTATCTTCAGACATGATGGGGGG AGAGGATTTGTGGAGGTGAAAGAATTTGGAGTTCCTGACACAGTCAAGTCGATGTCTTGG TGTGGTGAGAATATCTGCTTGGGGATTAGAAGAGAGTACATGATATTGAATACTACCAAT GGTGCATTGTCTGAGGTGTTTCCTTCGGGGAGGATCGCCACACCTCTTGTGGTGCCTCTT CCCTCTGGAGAACTTCTTTTGGGCAAGGATAATATTGGTGTCTTAGTTGACCAAAATGGA AAGTTGATCCAAGAGGGCAGGGTTTGTTGGTCAGAGGCTCCTGCAATTGTTGTTGTTCAG AAGCCCTATGCCATAGGTCTTTTACCGCGACATGTTGAGATACGCTCTCTTCGTGTTCCT TATCCTTTGATTCAAACAGTTGTCCTTCGGAATGTTCGTCGTCTTGTTCGAAGCAACAAT GCTGTCATTGTTGCTCTTGATAATTCTGTTTTTGGATTTTTCCCTGTTCCTCTCGGTGCA CAGATTGTACAACTAACAGCCTCTGGAAACTTTGAGGAGGCCTTGGCTTTGTGCAAATTG CTACCACCAGAAGATTCAAGTCTTAGATCTGCAAAGGAGCAATCAATTCATATAAGATAT GCACACTTCCTGTTTGAAAATGGGAGCTATGAAGAAGCAATGGAACATTTTCTGGCATCT CAAGTTGAACTCACTTATGTGCTTGCCTTATATCCATCCATTATTGTTCCAAAATCATCT TTCATACCTGAACCACAGAAATTTGTGGAAGTTGGGGATGCACCGTATCTCTCCCGAGCT TCCTCTGGTCTGTCAGATGATCTGGATTCTACGCCTTCACATGTCTTAGAATCTGATGAA ATGGATATAGAATCCAAAAAAATGAGTCACAACACTTTGATGGCTCTGATTAAGTATTTA CAGAAGAGAAGATACAGTGTTGTTGAGAAAGCCACAACTGAGGGCACTGAAGAGGTCGTT TCAGATGCTGTCGGAGATAATTTCATTTCTTATGGAACTAGCCGGTCCAAAAAACCAACC AAGGGCAGAATTCATGCTCCAATCACTTCCATCGCTAGGGATATGGCTGCAATACTGGAC ACTGCACTTCTTCAAGCTCTTATATTAACTGGACAGTTCTCAGCAGCTACAGATTTTCTG AAAGTCCTCAACTACTGTGATGTGAAAATATGTGAGGAGTTCCTGCAAAAAAGAAGCCAG TATGCTTGTCTGCTAGAACTTTATAGGAGCAATTCAATGCATCGTGAAGCACTTAAACTT CTCCATCAATTGGTAGAAGAGTCCAAGTCAGAGCAAACTCCTGTAGAGCTCTCATTGAAG TTCAAGCCTGATATGGTCATTGAATATCTCAAACCCCTTTGTGCAACTGACCCCATGCTT GTCCTGGAGTTCTCATTGCCCGTTCTTGAAAGCTGTCCTATGCAAACCATTGAGCTATTC TTGTCTGGTAATATTCCAGCGGACTTGGTGAATTCTTACTTAAAACAGCATGCTCCAAAC ATGCAGGCAACATATCTGGAACTCATGCTTGCCATGAATGAAAATAGCATCTCCGGGAAT CTGCAGAATGAAATGAAAAGCTATGAAAGAAATACTGCTGCTAGTGAAGTGAGAAAGCTG AGGCTTTTAAGTTTCTCCTCTTTGATATGTAACTTGTGGCAGGTGCAAATTTATCTCTCA GAAGTGCTTGATTTGTATGCTGAACTTAGTTCCCAGCAAAAATGGGATGAAAAAACATTT TCTCCAACAAGGAAAAAGCTTTTGTCTGCTTTGGAGAGTATATCCGGGTATAATCCAGAG GTGTTGCTTAAGAGACTTCCACCAGATGCTCTGTATGAAGAACGTGCACTTCTGTTGGGG AAAATGAATCAACATGAACTTGCGCTATCTATTTATGTGCACAAGCTTCATGTTCCTGAA CTTGCACTGTCCTATTGTGATCGGGTGTACGAGTCAGGACTTCAACAACATTCCGCAAAA TCTTATGGAAACATTTACCTGACTCTACTGCAAATCTATCTCAATCCCATGAAGACAACA AAAAATTTTGAGAAGAAAATTACTAATCTGGTATCATCTCAGAGCCCTGGGATTCCAAAA GTTGGTTCAGGAACTCCAGCAAAGGTAAAAGGAGGCCGCTTCAAGAAAATTGCTGAAATT GAGGGCGCTGAGGACACTCGATTCAGTCCAAGTGGCACTGACAGTGGTAGGAGCGATGGA GATACAGAAGATGCTGCCGAGGAAGGAGATTCTACTATTATGCTAGATCAGGTGCTGGAT CTTTTGAGCAAAAGGTGGGATCGGATCCATGGGGCCCAAGCTCTGAAACTACTACCAAGG GACACTAAACTACAGAACTTGCTTCCATTTCTTGGACCTCTCCTGAGAAAATCCAGTGAA GCGTATCGAAACTTTTCAGTGATAAAAAGCTTGAGAGAAAGTGAAAATCTACAGGTAAAA GATGAACTGTATAGTCAAAGAAAAGCAGTCTTGAAGATCACAAGTGATAGCATGTGTTCT CTTTGCAACAAGAAGATTGGCACCAGTGTCTTTGCAGTGTATCCTAATGGCAAGACAATT GTGCATTTTGTTTGCTTTAGAGATTCACAGAATATGAAGGCAGTTGGAAGAGGCTCTCAG TCAAGGAAAAGATGATAATGAGATGCTATATGTGGATTGATCCCTTTCCTTCATGTTAGC ACCGTTTAACACGTTCTGAGGCTTTAAGTTTTAAGTCGCCATTAAGTCCTGTAAGTTACC TCTGCTCTCTGTCCGTGTTTCTGGAAGTGTTGTGGTTTGTGCATGATTAGTGCCAAGAGA TATGAAATGTGCTGGTGATTCAAGTTTGCTAGCAAAGAATGAATGCCTCTTCCAAAGGAA TGTGTAATACAAACACAATGTTGTATATTATGTCAAATGTGTAATTGAATGTATCCATTT GAGGTTGTGTGATGTCGATATTAAAAAGGATTGAAGCTTGAATTCGAGGTGGTTTATACC TTATTTATGAAGAGTGTTTGTTTCAACTCAGGCCGACTGTTCAACTAATATGCAATAATA CACAATTTCTTTGTTGATTGTAT