Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g056030.3.1
CDS Infomation	Nuclear-interacting partner of ALK (AHRD V3.3 *** W9QKR2_9ROSA)
Sequence	ATGAAGGAAGAAGCTATAAGCTCTTCCCATGATCCTCAATTGCCGCCCAAATCATCGTCT CCTCCCCCTATCCCTACACCTGCTGCTAGTTCCGTAGGGGCATCATCTCCAGCAGTTCCA ACAAATGCTGGGGGCACAGATTGGTTTGCACAAGCACAGGGTTCAAAAGCAGCTTCACTT TCCCGTATTGGTTCACAGCCCATGTGGACTTCAGTTAGCAATAGTGCTGGTGGTTCTGCA CTAGGATCATCACAACCTTCATGTAGACCATGGGAAAGGGGTGATCTATTGAGGCGTCTG TCCACTTTCCAACCCACAAACTGGTTTGGGAAGCCAAAGGCTTCAAGCTCACTGGCTTGT GCTAGAAGAGGCTGGGTGAATGTGGATGCTGATACGATTGAGTGTGAAGCTTGTGGTGCT AATCTGAGATTCGTTTCTTCTGCAACATGGACCTCTGGTGAAGCTGATATCGCGGGGGAA GAATTTGCAAAGAAACTTGATGAAGGGCACAAGGCCACTTGCCCTTGGCGAGGAAACAGC TGTGCAGAAAGCTTGGTCCAGTTCCCTCCTACACCACCATCAGCCTTAATTGGTGGTTAT AAGGATCGATGTGATGGATTGCTTCAGTTTCCTTCACTTCCAATAGTGGCTGCATCTGCA ATTGAGCACATCAAAGTCTCTCGAAGTCCAGAAATTGATCGCCTTCTAGCTCAGTCACAG GCTTTTGGTGGGATGGAACCTATCTTTAGGTTAGAGATTATGTCAGGAACTGAAACCAAC ACAGAAGATGTCTTCCTTGTATACTCTCGTGCTAATAAGTTGATAAGCCTGTGCGGATGG GAGCCAAGATGGCTTCCAAATGTCCAAGACTGCGAAGAACATTCTGCTCAATCAGCTAGG AGTGGATACTCCATTGGTCCCACAAAATATCACACTTCTCTGCAAGATTTTGGCCATGGA GAAAATGTATTGCCTTCTTCAAAGAAAAAAGTTCATAGTAAGAACGAAGCTGTGGGTCCC AGGTCTAAAGGTGAATCTAGGTCGCCTTTATTGGATTGTAGTTTGTGTGGAGCCACCGTG AGAATTTGGGACTTCCTCACTGTTGTCCGTCCTGCTTGCTTTGCTCCAAATAGCAATGAT ATCCCTGAAACAAGCAAGAAAATGGCATTGACACGTGGAGCAAGTGCTGCTAGTGGAATC AGTGGGTGGGTTGCTGCTGATGGTGTTGAAAAGGAACAGACAGAGGACCTTGATGAGGCT GCAACAAATGATGTGGGAAGGTCTTTGTCAAATATAGGAGTAGATCTGAATCTCACAATG GCTGGTGGATTATCCTCTTCACAGGTGAACATGGATGCAAAGCCTGAACAATTCGAAGAT GGACATAAACGAAGATATCCAGTTACTGGGCAGCCTTCAAGCAGTGAAGTTGGTGGTCAA GCAGCTTCATATGAATCTCGAGGCCCTAGTTCCCGCAAACGAAACTTAGAGGAAGGTGGA AGCACGGTTGACAGGCCACAATTGCCTCTACAACCGGCTGATAGTGTTGAAGGCACTGTG ATAGACCGTGACGGAGATGAAGTAAATGATGGTAGTCAGTACTCAGCTGGCCCATCAAAG CGCCCATGTCAGTCTGATGCCTTCGGGACCCACCATACTTCATATGGCAAGGATTCATCA GGTGCTGGTCCTAGCCTGTCACTTGGTTTTGAGATTGGTACAAGTGCTCCCAGAGATGAT ACCTTTGGCCGAAGACACGAACAGCTAACTGGTGTGCCCTCTACTCGAGACTCAACACAT GTTTCATCTGTTATTGCAATGGACACGGTTCACGGTACAGATGATTCAATGGAAAGTGTT GAGAATCTTCCCGGAGACTTTGATGATGTTCATTTCCCTTCTACATCTATGTTAAGAAGT GCAGACCCAGTGGAAACTTCAGAATTGAACTACAGTAACCAAGCACAACAAAGTACTTGT CCGGCTGTGGTCAGGAGTGCTGGTGAAATGGGTGTTAGTAGCACAAATGATGAAGAAGTC GTGAATGCTGATACTGCCACTGCCAATGTGAGGGATGGCCCTAGCTTTGGAATCAGTGGA GGAAGTATTGGAATGGGTGCTAGTCATGAAGCTGAAATCCATGGGACAGATGCTTCAGTG CATAGAGCAGATAGCGTTGCTGGTGAGGTAGAAGCGGTTGCTGAAATTACTGAAAATCAG GGGCAAACAGGTGAATTTGCTCCAGATCCAGGACTTATGGGTGACTATGTCCCTGAAGAG GTGGACCGTGGAGATCCTAATGGTGATAGTCAAGATCTGACGTCTCGTTCAGTGGGAAGG GCTGATAGTGGCTCAAAAGTTGTTGGCTCTGCCAAAGCAGAATCCATTGAAAGTGGTGAA AAGAATTGTCACGTGCAACCTATGCTCCCAAATAGTCCACACCCTTCTCTTTCTTGCAAT GCTGTTGTATGTTCCGCCCATGAAGCATCCAAAGAAGAAGTTACCCAAAATAATGCACCA GCTACTGATGATTGTGGATTCGTTGAGTCAGACTATATGCTAGCAAATGGAACAGGGCCT CCTATTGGAGAAAGCAACTACGAAGAAGCTGTTGAATTTGATCCAATTAAGCATCATAAT TTTTTCTGTCCTTGGGTTAATGGAAATGTTGCTGCTGCTGGCTGCAGTAATAGTGGCAGT TCCTCTTCCAACTCTGGTGCTATTGCTCTCTGTGGTTGGCAGCTAACATTAGATGCTTTG GATTCTTTCCAGTCACTTGGACATATTCCAGTCCAAACTGTTGAATCTGAATCAGCTGCA TCTCTGTACAAGGATGATCATCGTGCACCAGGTAGGAAGCTCTTGGCGCGCCACTCTTTT AGCAAACATCATGGACACAACTGA

Peptide Sequence

PEP ID	Solyc07g056030.3.1
PEP Infomation	Nuclear-interacting partner of ALK (AHRD V3.3 *** W9QKR2_9ROSA)
Sequence	MKEEAISSSHDPQLPPKSSSPPPIPTPAASSVGASSPAVPTNAGGTDWFAQAQGSKAASL SRIGSQPMWTSVSNSAGGSALGSSQPSCRPWERGDLLRRLSTFQPTNWFGKPKASSSLAC ARRGWVNVDADTIECEACGANLRFVSSATWTSGEADIAGEEFAKKLDEGHKATCPWRGNS CAESLVQFPPTPPSALIGGYKDRCDGLLQFPSLPIVAASAIEHIKVSRSPEIDRLLAQSQ AFGGMEPIFRLEIMSGTETNTEDVFLVYSRANKLISLCGWEPRWLPNVQDCEEHSAQSAR SGYSIGPTKYHTSLQDFGHGENVLPSSKKKVHSKNEAVGPRSKGESRSPLLDCSLCGATV RIWDFLTVVRPACFAPNSNDIPETSKKMALTRGASAASGISGWVAADGVEKEQTEDLDEA ATNDVGRSLSNIGVDLNLTMAGGLSSSQVNMDAKPEQFEDGHKRRYPVTGQPSSSEVGGQ AASYESRGPSSRKRNLEEGGSTVDRPQLPLQPADSVEGTVIDRDGDEVNDGSQYSAGPSK RPCQSDAFGTHHTSYGKDSSGAGPSLSLGFEIGTSAPRDDTFGRRHEQLTGVPSTRDSTH VSSVIAMDTVHGTDDSMESVENLPGDFDDVHFPSTSMLRSADPVETSELNYSNQAQQSTC PAVVRSAGEMGVSSTNDEEVVNADTATANVRDGPSFGISGGSIGMGASHEAEIHGTDASV HRADSVAGEVEAVAEITENQGQTGEFAPDPGLMGDYVPEEVDRGDPNGDSQDLTSRSVGR ADSGSKVVGSAKAESIESGEKNCHVQPMLPNSPHPSLSCNAVVCSAHEASKEEVTQNNAP ATDDCGFVESDYMLANGTGPPIGESNYEEAVEFDPIKHHNFFCPWVNGNVAAAGCSNSGS SSSNSGAIALCGWQLTLDALDSFQSLGHIPVQTVESESAASLYKDDHRAPGRKLLARHSF SKHHGHN*

Transcript Sequence

Transcript ID	Solyc07g056030.3.1
Transcript Infomation	Nuclear-interacting partner of ALK (AHRD V3.3 *** W9QKR2_9ROSA)
Sequence	TATCACAGCAAAATCGAAACTGAAAAAAAAACAAAACAGAAATTAGTCGTAAAGCAAACA AGTATAGCTCTCAACACCATCACCGAAAGAGAGAAAACCCACACCATTATACACGCATTT TCACACAGTAGAAGGTGAAAAATCATGAAGGAAGAAGCTATAAGCTCTTCCCATGATCCT CAATTGCCGCCCAAATCATCGTCTCCTCCCCCTATCCCTACACCTGCTGCTAGTTCCGTA GGGGCATCATCTCCAGCAGTTCCAACAAATGCTGGGGGCACAGATTGGTTTGCACAAGCA CAGGGTTCAAAAGCAGCTTCACTTTCCCGTATTGGTTCACAGCCCATGTGGACTTCAGTT AGCAATAGTGCTGGTGGTTCTGCACTAGGATCATCACAACCTTCATGTAGACCATGGGAA AGGGGTGATCTATTGAGGCGTCTGTCCACTTTCCAACCCACAAACTGGTTTGGGAAGCCA AAGGCTTCAAGCTCACTGGCTTGTGCTAGAAGAGGCTGGGTGAATGTGGATGCTGATACG ATTGAGTGTGAAGCTTGTGGTGCTAATCTGAGATTCGTTTCTTCTGCAACATGGACCTCT GGTGAAGCTGATATCGCGGGGGAAGAATTTGCAAAGAAACTTGATGAAGGGCACAAGGCC ACTTGCCCTTGGCGAGGAAACAGCTGTGCAGAAAGCTTGGTCCAGTTCCCTCCTACACCA CCATCAGCCTTAATTGGTGGTTATAAGGATCGATGTGATGGATTGCTTCAGTTTCCTTCA CTTCCAATAGTGGCTGCATCTGCAATTGAGCACATCAAAGTCTCTCGAAGTCCAGAAATT GATCGCCTTCTAGCTCAGTCACAGGCTTTTGGTGGGATGGAACCTATCTTTAGGTTAGAG ATTATGTCAGGAACTGAAACCAACACAGAAGATGTCTTCCTTGTATACTCTCGTGCTAAT AAGTTGATAAGCCTGTGCGGATGGGAGCCAAGATGGCTTCCAAATGTCCAAGACTGCGAA GAACATTCTGCTCAATCAGCTAGGAGTGGATACTCCATTGGTCCCACAAAATATCACACT TCTCTGCAAGATTTTGGCCATGGAGAAAATGTATTGCCTTCTTCAAAGAAAAAAGTTCAT AGTAAGAACGAAGCTGTGGGTCCCAGGTCTAAAGGTGAATCTAGGTCGCCTTTATTGGAT TGTAGTTTGTGTGGAGCCACCGTGAGAATTTGGGACTTCCTCACTGTTGTCCGTCCTGCT TGCTTTGCTCCAAATAGCAATGATATCCCTGAAACAAGCAAGAAAATGGCATTGACACGT GGAGCAAGTGCTGCTAGTGGAATCAGTGGGTGGGTTGCTGCTGATGGTGTTGAAAAGGAA CAGACAGAGGACCTTGATGAGGCTGCAACAAATGATGTGGGAAGGTCTTTGTCAAATATA GGAGTAGATCTGAATCTCACAATGGCTGGTGGATTATCCTCTTCACAGGTGAACATGGAT GCAAAGCCTGAACAATTCGAAGATGGACATAAACGAAGATATCCAGTTACTGGGCAGCCT TCAAGCAGTGAAGTTGGTGGTCAAGCAGCTTCATATGAATCTCGAGGCCCTAGTTCCCGC AAACGAAACTTAGAGGAAGGTGGAAGCACGGTTGACAGGCCACAATTGCCTCTACAACCG GCTGATAGTGTTGAAGGCACTGTGATAGACCGTGACGGAGATGAAGTAAATGATGGTAGT CAGTACTCAGCTGGCCCATCAAAGCGCCCATGTCAGTCTGATGCCTTCGGGACCCACCAT ACTTCATATGGCAAGGATTCATCAGGTGCTGGTCCTAGCCTGTCACTTGGTTTTGAGATT GGTACAAGTGCTCCCAGAGATGATACCTTTGGCCGAAGACACGAACAGCTAACTGGTGTG CCCTCTACTCGAGACTCAACACATGTTTCATCTGTTATTGCAATGGACACGGTTCACGGT ACAGATGATTCAATGGAAAGTGTTGAGAATCTTCCCGGAGACTTTGATGATGTTCATTTC CCTTCTACATCTATGTTAAGAAGTGCAGACCCAGTGGAAACTTCAGAATTGAACTACAGT AACCAAGCACAACAAAGTACTTGTCCGGCTGTGGTCAGGAGTGCTGGTGAAATGGGTGTT AGTAGCACAAATGATGAAGAAGTCGTGAATGCTGATACTGCCACTGCCAATGTGAGGGAT GGCCCTAGCTTTGGAATCAGTGGAGGAAGTATTGGAATGGGTGCTAGTCATGAAGCTGAA ATCCATGGGACAGATGCTTCAGTGCATAGAGCAGATAGCGTTGCTGGTGAGGTAGAAGCG GTTGCTGAAATTACTGAAAATCAGGGGCAAACAGGTGAATTTGCTCCAGATCCAGGACTT ATGGGTGACTATGTCCCTGAAGAGGTGGACCGTGGAGATCCTAATGGTGATAGTCAAGAT CTGACGTCTCGTTCAGTGGGAAGGGCTGATAGTGGCTCAAAAGTTGTTGGCTCTGCCAAA GCAGAATCCATTGAAAGTGGTGAAAAGAATTGTCACGTGCAACCTATGCTCCCAAATAGT CCACACCCTTCTCTTTCTTGCAATGCTGTTGTATGTTCCGCCCATGAAGCATCCAAAGAA GAAGTTACCCAAAATAATGCACCAGCTACTGATGATTGTGGATTCGTTGAGTCAGACTAT ATGCTAGCAAATGGAACAGGGCCTCCTATTGGAGAAAGCAACTACGAAGAAGCTGTTGAA TTTGATCCAATTAAGCATCATAATTTTTTCTGTCCTTGGGTTAATGGAAATGTTGCTGCT GCTGGCTGCAGTAATAGTGGCAGTTCCTCTTCCAACTCTGGTGCTATTGCTCTCTGTGGT TGGCAGCTAACATTAGATGCTTTGGATTCTTTCCAGTCACTTGGACATATTCCAGTCCAA ACTGTTGAATCTGAATCAGCTGCATCTCTGTACAAGGATGATCATCGTGCACCAGGTAGG AAGCTCTTGGCGCGCCACTCTTTTAGCAAACATCATGGACACAACTGAATGTGAAAGTAG GCGTGAGACTTGCAATCTGGGCTTGAACCAGCAATGTCGAAGTACCCCAATGGTCAACTT TGCAGTCTAGTTATATATGCGGAGTTGTGAAGGATATTCTAGCTATATTCTGGATTTTCG TGGATTCCCTTGCTTTTCTTAGTTCGAACTATTAATAATGCCTCAAATGAAGAGGCTGAT TTAGTTGAGGATACTTTTCTGTTTAATGATTTAGTAGGTTTGGCTTTCAGACATCCTGAA ATTTGAGACTATGAAGTTGAGCGAGTAATTCTGTAAAACTTATAAATGCTCAAGCAATAT TTATATGAAGCATTTGTCCAGCTTAGACT