Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc07g056020.3.1
CDS Infomation	Translation initiation factor IF-2 (AHRD V3.3 *** W9QCR7_9ROSA)
Sequence	ATGAGTAGTATGGCTTCCCTGGTGAGTTTGGGGAGTGTGTGTGGATGTTCTTCTGGACAG TTTGAAGGGTCATTCTCACTAGTTAGGAGGGTTTCTTTTTCGAAGAATTTTGGAAGCGTA AATAGAATTTGGGGTGGGAAAAGATGGCGTTATGTTTCTGTTTGTAGATATTCAGTCACC ACGGATTTCGTTGCTGATCAGGGGACATCAATATCTCTTGAATCCTCATCCAGTAGTAAT AAGGATGATGATGCTGATCTTATGCTTAAGCCGGCTCCTAAGCCACAATTGAAACCTGGA CCCAGACCTGGCCCTGTTTTAGGGAATGGACCAGTCCTTAGCTCTAATTCTGATGGTGAA AAAAGAAATCCTATTGAAGAAGAGAGAAGCAAGGTGATTGAGTCACTTGGAGAGGCATTA GAGACAGCGGAGAAGCTAGAAACTAACAGAAAAACAAATGTTTCGGTTAACAAGGCGTCT GCCAGTGCACGTACTACACAAAGAAATAGCAAGACAGTTGATTCTGATGATTCTTCCAAC AGGAAGTCGAAAACTTTGAAGAGTGTCTGGAAAAAAGGGAATCCGATTGCTGCTGTACAA AAAGTTGTAAAACCACCCCCTAAACAGGAACCAATGACTGATGGTGGAAGGAATAGTGAA TCCCAAAGTGTTGCTCCAATAAAACCCCCTCAGCCACCCCAGAAAGTTCAACCACAGTTA CTAGCAAGACCATCTGTAGCTCCTCCTCCTCCTATTATCAAGAAACCGGTGATATTGAAG GATGTTGGTGCTGCGGCGAAGTCCCCACCCTCTGATGGAGTTGAATCTGTTGGAAAGACC AAAGAACTTGAAGCAGCTGGAAAGACCAAAGAACGCAAGACAATATTGGTTGATAAATTT GCCTCCAAGAAATCAGCTGTTGATCCTGTGATTGCTCAAGCTGTTTTAGCCCCTCCTAAA TTTGGAAAGAGCGCACCTCCTGGTAAATTCAGGGAGGAGTTCCGTAAAAAGAGTGGTGTA TCTGGAGGACAACGCAGGCGTATGGTTGATGATGGGATTCCCGACGAGGAAGCATCAGAG CTTGATGTTTCTCTTCCTGGTAGAGCAAGGAAGGGAAGGAAGTGGACTAAGGCAAGTCGC AAGGCAGCTCGACTTAAGGCTGCTCAAGAGTCTGCACCTGTCAAAGTAGAAATTCTAGAG GTTGGTGAAGAAGGCATGCCGACTGAGGAGTTGGCCTACAACTTAGCTACTAGCGAAGGT GAAATCCTTGGTCTTCTATATTCAAAAGGAATCAAGCCTGATGGTGTGCAAACTCTCAGC AATGACATGGTGAAGATGGTTTGCAAAGAATATGAAGTGGAGGTTATCGATGCTGCCACA GTTAAAGTGGAAGAGATGGCAAAAAAGAAGGAAATTTTCGATGAAGATGACTTAGACAAA CTAGAAGATAGACCTCCTGTAATAACTATAATGGGTCATGTTGATCATGGAAAGACTACT CTCTTGGACCATATACGCAAGACCAAGGTGGCGGCATCTGAAGCTGGTGGAATTACTCAA GGTATTGGGGCATATAAGGTGCAAGTGCCTATTGACACCAAGTCCCAAATATGTGTTTTT CTTGATACACCTGGACACGAGGCTTTTGGGGCAATGAGAGCTCGTGGAGCTAGAGTAACA GACATTGCTATCATTGTAGTAGCCGCTGATGACGGAATTCGGCCTCAGACAAATGAGGCT ATAGCACATGCCAAGGCTGCCGGAGTTCCAATTGTGATTGCCATAAATAAGGTTGATAAG GATGGAGCAAATCCCGACCGAGTCATGCAAGAACTTTCCACCATTGGTTTGATGCCGGAA GATTGGGGCGGCGACGTTCCAATGGTTAAGATCAGTGCTCTTAAAGGAGAGAATATAGAT GATTTGCTGGAAATGGTCATGCTTGTTGCCGAGTTGCAAGAGTTGAAGGCTAATCCTCAA AGAAATGCCAAGGGGACTGTGATTGAGGCAGGTCTCGATAAATCTAAAGGACCTGTAGCA ACGTTCATTGTGCAGAATGGTACACTGAAAGGAGGAGATGTAGTAGTTTGTGGTGGAGCT TATGGAAAGGTGCGGGCTCTGTTTGATGATAAGGGAAAACGTGTTGATGAAGCAGGACCC TCCATGCCTGTGCAGGTGATTGGACTGAACAATGTTCCATTTGCTGGTGACGAGTTTGAG GTTGTTGAGTCCCTTGATATTGCTCGTGAAAAGGCTGAAGAACGAGCGGAGTCCTTGCGG AGTGAACGTTTATCGGAAAAGGCCGGAGATGGGAAAATTACACTCTCTTCTTTTGCTTCT GCTGTTTCAGGAGGAACTGGTCTAGACTTGCACCAACTAAATATTATTCTGAAAGTTGAT CTTCAGGGATCCATTGAGGCCGTCAGACAAGCTCTTCAGGTTCTTCCACAGGATAATGTC ACTTTGAAGTTCCTACTGCAAGCTACTGGTGATGTGAGCGCCAGTGATGTTGATCTTGCT GTAGCAAGTAAAGCTATTATTTTTGGCTTTAATGTTAGAACTCCGGGTGCTGTGAAGAGC TATGCTGACAATAAAGGTGTTGAAATCCGACTATACAAAGTTATCTATGATCTTATTGAT GATGTACGAAAAGCAATGGAGGGACTTCTGGAATCAGTTGAGGAACAAGTGCCAATTGGT TCAGCAGAAGTACGTGCTGTTTTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGGTA ACAGAGGGAAAAGTAGTGGAAGAATGTGGTGTTCGTGTCACTAGAAAAGGCAAAGCAGTT CATGTTGGTGTGGTCGAATCTTTAAGACGGGTGAAGGAAACTGTGAAAGAGGTTAATGCG GGACTGGAGTGTGGTATTGGGGTTGAAGATTTCGATGACTTTGAGGTGGGTGATATTCTG GAGGCTTTCAACTCAGTTCAGAAAAGACGAACACTCGAGGAGGCCTCAGCATCAATGGCA GCAGCACTTGAAGAAGTGGGGAGAGGCCTGTGA

Peptide Sequence

PEP ID	Solyc07g056020.3.1
PEP Infomation	Translation initiation factor IF-2 (AHRD V3.3 *** W9QCR7_9ROSA)
Sequence	MSSMASLVSLGSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRYVSVCRYSVT TDFVADQGTSISLESSSSSNKDDDADLMLKPAPKPQLKPGPRPGPVLGNGPVLSSNSDGE KRNPIEEERSKVIESLGEALETAEKLETNRKTNVSVNKASASARTTQRNSKTVDSDDSSN RKSKTLKSVWKKGNPIAAVQKVVKPPPKQEPMTDGGRNSESQSVAPIKPPQPPQKVQPQL LARPSVAPPPPIIKKPVILKDVGAAAKSPPSDGVESVGKTKELEAAGKTKERKTILVDKF ASKKSAVDPVIAQAVLAPPKFGKSAPPGKFREEFRKKSGVSGGQRRRMVDDGIPDEEASE LDVSLPGRARKGRKWTKASRKAARLKAAQESAPVKVEILEVGEEGMPTEELAYNLATSEG EILGLLYSKGIKPDGVQTLSNDMVKMVCKEYEVEVIDAATVKVEEMAKKKEIFDEDDLDK LEDRPPVITIMGHVDHGKTTLLDHIRKTKVAASEAGGITQGIGAYKVQVPIDTKSQICVF LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKVDK DGANPDRVMQELSTIGLMPEDWGGDVPMVKISALKGENIDDLLEMVMLVAELQELKANPQ RNAKGTVIEAGLDKSKGPVATFIVQNGTLKGGDVVVCGGAYGKVRALFDDKGKRVDEAGP SMPVQVIGLNNVPFAGDEFEVVESLDIAREKAEERAESLRSERLSEKAGDGKITLSSFAS AVSGGTGLDLHQLNIILKVDLQGSIEAVRQALQVLPQDNVTLKFLLQATGDVSASDVDLA VASKAIIFGFNVRTPGAVKSYADNKGVEIRLYKVIYDLIDDVRKAMEGLLESVEEQVPIG SAEVRAVFSSGSGRVAGCMVTEGKVVEECGVRVTRKGKAVHVGVVESLRRVKETVKEVNA GLECGIGVEDFDDFEVGDILEAFNSVQKRRTLEEASASMAAALEEVGRGL*

Transcript Sequence

Transcript ID	Solyc07g056020.3.1
Transcript Infomation	Translation initiation factor IF-2 (AHRD V3.3 *** W9QCR7_9ROSA)
Sequence	TTCAATTCCTTCTCAGCCACTCGCTTCTTTCATCTTTGTCTATCTCTCTGTACACACAAA CTAACACCAGCTAACTGTGTGTTGGTAACTTAACCCTTGGCTCTCTATTGCTCTTCCACT CCTCATTAGCCAATTTCTTATGCAAGAACAAGGTCATTACTTCATAAAGGTAACACCTTT TCAGCTCCCATGTGATAAATAGAAGAAATTCCATCTGGGGTTCCTTTCTTGATTTCAAAA AGATTAGATTTTTATTAGTTTTTTGCTTTAGTTTTCATGATTCTGGTTATTGAATTGAAT TTCATTGTATACCCAGGTTCTTGATTTTTGATATTTGGAGGTGAATTTTGGGAAGTGAGG ATTTTAAGTGCTACATTGTTGTTAGGTAGTTTTTGTGGGGATTTGGTTGGATAAGTAAAT GGTTGAGGTGTAAGTTAAGTGTACAGAGAGATGAGTAGTATGGCTTCCCTGGTGAGTTTG GGGAGTGTGTGTGGATGTTCTTCTGGACAGTTTGAAGGGTCATTCTCACTAGTTAGGAGG GTTTCTTTTTCGAAGAATTTTGGAAGCGTAAATAGAATTTGGGGTGGGAAAAGATGGCGT TATGTTTCTGTTTGTAGATATTCAGTCACCACGGATTTCGTTGCTGATCAGGGGACATCA ATATCTCTTGAATCCTCATCCAGTAGTAATAAGGATGATGATGCTGATCTTATGCTTAAG CCGGCTCCTAAGCCACAATTGAAACCTGGACCCAGACCTGGCCCTGTTTTAGGGAATGGA CCAGTCCTTAGCTCTAATTCTGATGGTGAAAAAAGAAATCCTATTGAAGAAGAGAGAAGC AAGGTGATTGAGTCACTTGGAGAGGCATTAGAGACAGCGGAGAAGCTAGAAACTAACAGA AAAACAAATGTTTCGGTTAACAAGGCGTCTGCCAGTGCACGTACTACACAAAGAAATAGC AAGACAGTTGATTCTGATGATTCTTCCAACAGGAAGTCGAAAACTTTGAAGAGTGTCTGG AAAAAAGGGAATCCGATTGCTGCTGTACAAAAAGTTGTAAAACCACCCCCTAAACAGGAA CCAATGACTGATGGTGGAAGGAATAGTGAATCCCAAAGTGTTGCTCCAATAAAACCCCCT CAGCCACCCCAGAAAGTTCAACCACAGTTACTAGCAAGACCATCTGTAGCTCCTCCTCCT CCTATTATCAAGAAACCGGTGATATTGAAGGATGTTGGTGCTGCGGCGAAGTCCCCACCC TCTGATGGAGTTGAATCTGTTGGAAAGACCAAAGAACTTGAAGCAGCTGGAAAGACCAAA GAACGCAAGACAATATTGGTTGATAAATTTGCCTCCAAGAAATCAGCTGTTGATCCTGTG ATTGCTCAAGCTGTTTTAGCCCCTCCTAAATTTGGAAAGAGCGCACCTCCTGGTAAATTC AGGGAGGAGTTCCGTAAAAAGAGTGGTGTATCTGGAGGACAACGCAGGCGTATGGTTGAT GATGGGATTCCCGACGAGGAAGCATCAGAGCTTGATGTTTCTCTTCCTGGTAGAGCAAGG AAGGGAAGGAAGTGGACTAAGGCAAGTCGCAAGGCAGCTCGACTTAAGGCTGCTCAAGAG TCTGCACCTGTCAAAGTAGAAATTCTAGAGGTTGGTGAAGAAGGCATGCCGACTGAGGAG TTGGCCTACAACTTAGCTACTAGCGAAGGTGAAATCCTTGGTCTTCTATATTCAAAAGGA ATCAAGCCTGATGGTGTGCAAACTCTCAGCAATGACATGGTGAAGATGGTTTGCAAAGAA TATGAAGTGGAGGTTATCGATGCTGCCACAGTTAAAGTGGAAGAGATGGCAAAAAAGAAG GAAATTTTCGATGAAGATGACTTAGACAAACTAGAAGATAGACCTCCTGTAATAACTATA ATGGGTCATGTTGATCATGGAAAGACTACTCTCTTGGACCATATACGCAAGACCAAGGTG GCGGCATCTGAAGCTGGTGGAATTACTCAAGGTATTGGGGCATATAAGGTGCAAGTGCCT ATTGACACCAAGTCCCAAATATGTGTTTTTCTTGATACACCTGGACACGAGGCTTTTGGG GCAATGAGAGCTCGTGGAGCTAGAGTAACAGACATTGCTATCATTGTAGTAGCCGCTGAT GACGGAATTCGGCCTCAGACAAATGAGGCTATAGCACATGCCAAGGCTGCCGGAGTTCCA ATTGTGATTGCCATAAATAAGGTTGATAAGGATGGAGCAAATCCCGACCGAGTCATGCAA GAACTTTCCACCATTGGTTTGATGCCGGAAGATTGGGGCGGCGACGTTCCAATGGTTAAG ATCAGTGCTCTTAAAGGAGAGAATATAGATGATTTGCTGGAAATGGTCATGCTTGTTGCC GAGTTGCAAGAGTTGAAGGCTAATCCTCAAAGAAATGCCAAGGGGACTGTGATTGAGGCA GGTCTCGATAAATCTAAAGGACCTGTAGCAACGTTCATTGTGCAGAATGGTACACTGAAA GGAGGAGATGTAGTAGTTTGTGGTGGAGCTTATGGAAAGGTGCGGGCTCTGTTTGATGAT AAGGGAAAACGTGTTGATGAAGCAGGACCCTCCATGCCTGTGCAGGTGATTGGACTGAAC AATGTTCCATTTGCTGGTGACGAGTTTGAGGTTGTTGAGTCCCTTGATATTGCTCGTGAA AAGGCTGAAGAACGAGCGGAGTCCTTGCGGAGTGAACGTTTATCGGAAAAGGCCGGAGAT GGGAAAATTACACTCTCTTCTTTTGCTTCTGCTGTTTCAGGAGGAACTGGTCTAGACTTG CACCAACTAAATATTATTCTGAAAGTTGATCTTCAGGGATCCATTGAGGCCGTCAGACAA GCTCTTCAGGTTCTTCCACAGGATAATGTCACTTTGAAGTTCCTACTGCAAGCTACTGGT GATGTGAGCGCCAGTGATGTTGATCTTGCTGTAGCAAGTAAAGCTATTATTTTTGGCTTT AATGTTAGAACTCCGGGTGCTGTGAAGAGCTATGCTGACAATAAAGGTGTTGAAATCCGA CTATACAAAGTTATCTATGATCTTATTGATGATGTACGAAAAGCAATGGAGGGACTTCTG GAATCAGTTGAGGAACAAGTGCCAATTGGTTCAGCAGAAGTACGTGCTGTTTTCAGCAGT GGTAGTGGTCGTGTTGCTGGATGCATGGTAACAGAGGGAAAAGTAGTGGAAGAATGTGGT GTTCGTGTCACTAGAAAAGGCAAAGCAGTTCATGTTGGTGTGGTCGAATCTTTAAGACGG GTGAAGGAAACTGTGAAAGAGGTTAATGCGGGACTGGAGTGTGGTATTGGGGTTGAAGAT TTCGATGACTTTGAGGTGGGTGATATTCTGGAGGCTTTCAACTCAGTTCAGAAAAGACGA ACACTCGAGGAGGCCTCAGCATCAATGGCAGCAGCACTTGAAGAAGTGGGGAGAGGCCTG TGAAGAAACTAGAGGTGAGTTATTGCGTGGCGGTTATAGTTGGGGTTATACATGGCTCCT CTCCTCATGCATAGGTTTAATCAATTGCTAGAGGAGTGCGATGATCAGCACATCACGTTG GGTAAGTTTTGCCGGTTGTTTGTCAAATATACTTGATGCTGTAGAAGATGAGAGCTGCAG AGAATTGGCCATTGTTATGTGCTGTTGCAATGTATATAGTGATACAACACATTTGAGTTC CTCTTTTGTAAAGGGCCACAAGTCCATCATTTGTTTGAATTGCTCAAGATGAATGATGAT AACACATGTAGTCATAGTAGCATGGAGAAATGAAGTTCCCCAATATTGAAAATCTTAGGA TGCCTCATCTAGGTTAGATGCCTCATCTTGTAAACTCAATATCATTCAATTTGAAATGAA ATTCAGAAAACAAGGGAACAAGTAGTTCTACTGTTTCCGTTACATGGTATACTACATGGT ATGTGCCTTGCGGTTCAACAATGTACTTCATTCGCTATTTACTTTGTTCGTTACTT