Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g055900.1.1
CDS Infomation

LOW QUALITY:ATP-dependent DNA helicase (AHRD V3.3 *** K4CGC3_SOLLC)
Sequence

ATGAAGGTGTCATTGTTGTACACAGCTAAAACAGCCTATAGGTTGTTGAGCTCCAAAGCT
ACATGGGGGTGTCAAGTTAGTGCAAAGAGTAAGGTAAAAAGTTGTAGAAGTGAACTCATA
GGTACAAAAAAAACTAAAGTGAAGTTAACTGAGCAGCAAAATCAAATCTTGGAAGCAATT
TCAAATGGAAATTCTGTTTTCATTACTGGGTCAGCAGGGACCGGAAAAACCTATTTACTT
CAGCATATAATCACTAAACTTAAGAAGATTCATGGGAAATCTCGGGTTTTCGTTACAGCT
TCAACTGGGGTTGCTGCTTGTTCCCTCAATGGGCAAACCCTTCATTCTTTTGCTGGAATT
GGACTTGGTGATGCTAGTTGTGTGGATTTGCTATCTAGGGTTTCGTTGGATAAGAGAGCG
TATCGAAGATGGAATAAAGTTAGGGCTTTGGTTATCGATGAGATTAGTATGGTTAGTGGT
GAGGTTTTCGACAATCTTGAGTTCATTGCAAGGAGCATTAGAAGTGAAGAACTTGGCTGT
GAGGAGAAGATTTGGGGTGGGATACAATTAGTTGTGAGTGGAGACTTTTTTCAGCTTCCA
CCAGTAATTAATAAGAAGGGACAACAGAAGGAATTTGCTTTTGAAGCTGATTGTTGGAAT
GCTAGTTTTGACGAACAAATAGAACTTAAAACTATCTTTAGGCAGTCTGATGCTCAGCTT
ATAAAACTGCTGCAGGGGATTAGGAAAGGGAAGTATGATTCGGAGGATTTGAAGTTATTG
GATCAATGTTGCTCAAAGGTGGAGCCAGATTCTTCAGCTGTTCAGCTCTACCCACGGATT
GAAGATGTGAGTAGAGTGAACGCTGAGAGACTTGACTGTTTAGATGAGGTACTGTTCAAT
TATCAAGCTCTCGACAGTGGTAAAGATCCTTGGAAGAAGCAGCTTAAGAATGGAATTGCA
CCTGAGCTGCTCAAATTGTGTGTAGGATCTCGGGTTCTCTTGACGAAGAACATTGATGTT
GTTGGTGGACTTGTGAACGGTGCTACTGGTACAATCTTAGATTTTGCTGCTGTTCAAGAT
ACTCATAAATTATATGACCATGAGATTTCTGATATTTGCGGAAATGGTAACCTGCTACCT
GTTGTTAGATTTGATTCTGGCCAAGAACTGATGATTGGTGTAGAAAGATGGTATGTAATG
GAGGGAGATGAAGCTGTTGCAATGAGAAAGCAAATTCCACTCATATTAGCTTGGGCTCTA
AGCATTCACAAGTGTCAAGGGATGACTCTGAACAACCTCCATACAGACCTCTACCGTGTT
TTTGGCTTTGGGATGGTATATGTTGCTCTTTCGCGTGTTAAAAGCTTGGATGGCCTTAAT
CTAGTCAATTTCAATCCGTCAAAGATCAAGGCAAACCCAAAGGTTTTGCAATTCTATGAA
AGATTGTCAGCTGAGAAAGATGAACAAAAGGAAGACAGTGTAACTGATGATATCTAA

Peptide Sequence

PEP ID

Solyc07g055900.1.1
PEP Infomation

LOW QUALITY:ATP-dependent DNA helicase (AHRD V3.3 *** K4CGC3_SOLLC)
Sequence

MKVSLLYTAKTAYRLLSSKATWGCQVSAKSKVKSCRSELIGTKKTKVKLTEQQNQILEAI
SNGNSVFITGSAGTGKTYLLQHIITKLKKIHGKSRVFVTASTGVAACSLNGQTLHSFAGI
GLGDASCVDLLSRVSLDKRAYRRWNKVRALVIDEISMVSGEVFDNLEFIARSIRSEELGC
EEKIWGGIQLVVSGDFFQLPPVINKKGQQKEFAFEADCWNASFDEQIELKTIFRQSDAQL
IKLLQGIRKGKYDSEDLKLLDQCCSKVEPDSSAVQLYPRIEDVSRVNAERLDCLDEVLFN
YQALDSGKDPWKKQLKNGIAPELLKLCVGSRVLLTKNIDVVGGLVNGATGTILDFAAVQD
THKLYDHEISDICGNGNLLPVVRFDSGQELMIGVERWYVMEGDEAVAMRKQIPLILAWAL
SIHKCQGMTLNNLHTDLYRVFGFGMVYVALSRVKSLDGLNLVNFNPSKIKANPKVLQFYE
RLSAEKDEQKEDSVTDDI*

Transcript Sequence

Transcript ID

Solyc07g055900.1.1
Transcript Infomation

LOW QUALITY:ATP-dependent DNA helicase (AHRD V3.3 *** K4CGC3_SOLLC)
Sequence

ATGAAGGTGTCATTGTTGTACACAGCTAAAACAGCCTATAGGTTGTTGAGCTCCAAAGCT
ACATGGGGGTGTCAAGTTAGTGCAAAGAGTAAGGTAAAAAGTTGTAGAAGTGAACTCATA
GGTACAAAAAAAACTAAAGTGAAGTTAACTGAGCAGCAAAATCAAATCTTGGAAGCAATT
TCAAATGGAAATTCTGTTTTCATTACTGGGTCAGCAGGGACCGGAAAAACCTATTTACTT
CAGCATATAATCACTAAACTTAAGAAGATTCATGGGAAATCTCGGGTTTTCGTTACAGCT
TCAACTGGGGTTGCTGCTTGTTCCCTCAATGGGCAAACCCTTCATTCTTTTGCTGGAATT
GGACTTGGTGATGCTAGTTGTGTGGATTTGCTATCTAGGGTTTCGTTGGATAAGAGAGCG
TATCGAAGATGGAATAAAGTTAGGGCTTTGGTTATCGATGAGATTAGTATGGTTAGTGGT
GAGGTTTTCGACAATCTTGAGTTCATTGCAAGGAGCATTAGAAGTGAAGAACTTGGCTGT
GAGGAGAAGATTTGGGGTGGGATACAATTAGTTGTGAGTGGAGACTTTTTTCAGCTTCCA
CCAGTAATTAATAAGAAGGGACAACAGAAGGAATTTGCTTTTGAAGCTGATTGTTGGAAT
GCTAGTTTTGACGAACAAATAGAACTTAAAACTATCTTTAGGCAGTCTGATGCTCAGCTT
ATAAAACTGCTGCAGGGGATTAGGAAAGGGAAGTATGATTCGGAGGATTTGAAGTTATTG
GATCAATGTTGCTCAAAGGTGGAGCCAGATTCTTCAGCTGTTCAGCTCTACCCACGGATT
GAAGATGTGAGTAGAGTGAACGCTGAGAGACTTGACTGTTTAGATGAGGTACTGTTCAAT
TATCAAGCTCTCGACAGTGGTAAAGATCCTTGGAAGAAGCAGCTTAAGAATGGAATTGCA
CCTGAGCTGCTCAAATTGTGTGTAGGATCTCGGGTTCTCTTGACGAAGAACATTGATGTT
GTTGGTGGACTTGTGAACGGTGCTACTGGTACAATCTTAGATTTTGCTGCTGTTCAAGAT
ACTCATAAATTATATGACCATGAGATTTCTGATATTTGCGGAAATGGTAACCTGCTACCT
GTTGTTAGATTTGATTCTGGCCAAGAACTGATGATTGGTGTAGAAAGATGGTATGTAATG
GAGGGAGATGAAGCTGTTGCAATGAGAAAGCAAATTCCACTCATATTAGCTTGGGCTCTA
AGCATTCACAAGTGTCAAGGGATGACTCTGAACAACCTCCATACAGACCTCTACCGTGTT
TTTGGCTTTGGGATGGTATATGTTGCTCTTTCGCGTGTTAAAAGCTTGGATGGCCTTAAT
CTAGTCAATTTCAATCCGTCAAAGATCAAGGCAAACCCAAAGGTTTTGCAATTCTATGAA
AGATTGTCAGCTGAGAAAGATGAACAAAAGGAAGACAGTGTAACTGATGATATCTAA