Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g055860.3.1
CDS Infomation

type 5 protein serine/threonine phosphatase 62 kDa isoform
Sequence

ATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCCGAGCTGAAGAACTCAAGCAACTC
GCAAATGAAGCATTCAAAGGGCATAAGTATTCGCAAGCTATTGATCTGTACACACAAGCG
ATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTAACCGTGCGTTTGCTCACTCCAAA
TTGGAGGAATATGGAAGCGCAATACAGGATGGAACTAGAGCTATTGAAATTGACCCTAGA
TATTCAAAGGGTTATTATAGGAGAGGAGCTGCATATTTGGCAATGGGGAAGTTCAAAGAT
GCACTCAAGGATTTTCAACAGGTCAAGAAATTATGTCCAAACGACCCAGATGCTACCAAA
AAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTC
CCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTGATTATCGTTCTGTAGGATCAGGC
CCTGGCTCATCATATGTTCCCACCAAAACAACTGCTGTATCAGCGGCAGCAGCACTAATG
GGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCACAATGGTGGCAGCAGCAGCTTCG
GCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGGGACGTTGCAGTGATGGTTTCTTT
ACCAAGAGTCGAACACTTGAATTAGAGGTGGAGCCTCAATATGCTGGTGCAAGAATAGAG
GGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGCTGGATGACTTCAAAAACCAGAAG
AACTTGCATAAGAGGTATGCCTACCAAATAGTACTGCAAACAAGAGAAATGTTGCGAGCA
CTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGAAGCACTTCACTGTATGTGGTGAT
GTACATGGTCAGTTTTATGACCTCCTAAATATTTTCGAGCTCAATGGGCTTCCATCAGAA
GACAATCCGTATCTGTTCAATGGTGATTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTC
ATATTGACATTATTTGCCTTCAAGTGCATGTGTCCATCAGCTATACACCTGGCGAGAGGA
AATCACGAAAGCAAGAGCATGAACAAAATATATGGGTTTGAGGGCGAGGTCAGATCCAAG
TTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTACCTTTGGCCCAT
GTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTCTTTTTAGTGTTGATGGCGTGAAG
CTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGCCCCCAGAAGAGGGGTTAATGTGT
GAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTT
GGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCTTGCAGGAAAATAATCTAGATTTA
GTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAACTC
ATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGATGGGTAACAAGGGTGCTTTTATA
CGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGACATTTTCAGCAGTGCCACATCCT
GATGTCAAACCAATGGCATATGCCAACAACTTCCTTCGCATGTTTTCTTAA

Peptide Sequence

PEP ID

Solyc07g055860.3.1
PEP Infomation

type 5 protein serine/threonine phosphatase 62 kDa isoform
Sequence

MPGMEAENSNASRAEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHSK
LEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDALKDFQQVKKLCPNDPDATK
KLKECEKAVMKLKFEEAISVPESQRRSVADSIDYRSVGSGPGSSYVPTKTTAVSAAAALM
GVLVVYMGTKAATMVAAAASAALLVVLITFLWGRCSDGFFTKSRTLELEVEPQYAGARIE
GDVVTLDFVKKMLDDFKNQKNLHKRYAYQIVLQTREMLRALPSLVDIVVPEGKHFTVCGD
VHGQFYDLLNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLFAFKCMCPSAIHLARG
NHESKSMNKIYGFEGEVRSKLSEIFVELFAEVFCCLPLAHVINEKVFVVHGGLFSVDGVK
LSDIRAIDRFCEPPEEGLMCELLWSDPQPQPGRGPSKRGVGLSFGGDVTKRFLQENNLDL
VVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPDMKPNIVTFSAVPHP
DVKPMAYANNFLRMFS*

Transcript Sequence

Transcript ID

Solyc07g055860.3.1
Transcript Infomation

type 5 protein serine/threonine phosphatase 62 kDa isoform
Sequence

ATAGCGAATTAACTAGTAGAAAAAATTACCATGAGGAGGAGTGTAAGGAGAGCCGGAACT
ATCTAGGGCTTGAAAGCACTTTAGCAAAGTCTCAGTCTTCTTTGACAAACCCCCAAAGCG
CCATAAAAAGAGTATTCATGAAAATTCCAGTATTGTGACTTCGCACGCAACATCTACTCA
GCCAGCCTCCAGTCGCCATTGTTATGCCCGGTATGGAAGCTGAGAACTCAAACGCCTCCC
GAGCTGAAGAACTCAAGCAACTCGCAAATGAAGCATTCAAAGGGCATAAGTATTCGCAAG
CTATTGATCTGTACACACAAGCGATTGAGTTGAACGGTGAGAATGCGGTGTACTATGCTA
ACCGTGCGTTTGCTCACTCCAAATTGGAGGAATATGGAAGCGCAATACAGGATGGAACTA
GAGCTATTGAAATTGACCCTAGATATTCAAAGGGTTATTATAGGAGAGGAGCTGCATATT
TGGCAATGGGGAAGTTCAAAGATGCACTCAAGGATTTTCAACAGGTCAAGAAATTATGTC
CAAACGACCCAGATGCTACCAAAAAATTGAAGGAATGTGAGAAAGCTGTCATGAAGCTAA
AATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGGCGTTCAGTAGCTGACTCTATTG
ATTATCGTTCTGTAGGATCAGGCCCTGGCTCATCATATGTTCCCACCAAAACAACTGCTG
TATCAGCGGCAGCAGCACTAATGGGAGTTCTGGTGGTATATATGGGGACTAAGGCAGCCA
CAATGGTGGCAGCAGCAGCTTCGGCAGCCTTATTGGTGGTCTTGATAACATTTCTTTGGG
GACGTTGCAGTGATGGTTTCTTTACCAAGAGTCGAACACTTGAATTAGAGGTGGAGCCTC
AATATGCTGGTGCAAGAATAGAGGGAGATGTTGTAACATTAGATTTTGTGAAGAAGATGC
TGGATGACTTCAAAAACCAGAAGAACTTGCATAAGAGGTATGCCTACCAAATAGTACTGC
AAACAAGAGAAATGTTGCGAGCACTGCCCTCCCTTGTTGACATTGTTGTTCCCGAAGGGA
AGCACTTCACTGTATGTGGTGATGTACATGGTCAGTTTTATGACCTCCTAAATATTTTCG
AGCTCAATGGGCTTCCATCAGAAGACAATCCGTATCTGTTCAATGGTGATTTTGTTGATA
GAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTTGCCTTCAAGTGCATGTGTCCAT
CAGCTATACACCTGGCGAGAGGAAATCACGAAAGCAAGAGCATGAACAAAATATATGGGT
TTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAATATTTGTGGAACTCTTTGCAGAAGTGT
TCTGTTGCTTACCTTTGGCCCATGTCATAAATGAGAAAGTCTTTGTAGTACATGGAGGTC
TTTTTAGTGTTGATGGCGTGAAGCTCTCTGATATTAGAGCAATTGATCGGTTTTGTGAGC
CCCCAGAAGAGGGGTTAATGTGTGAATTGTTGTGGAGTGATCCACAACCTCAGCCTGGTA
GAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGGGGAGACGTAACTAAAAGATTCT
TGCAGGAAAATAATCTAGATTTAGTGGTGCGATCTCATGAAGTGAAGGATGAAGGTTATG
AGATTGAGCATGACGGCAAACTCATAACGGTGTTTTCCGCTCCCAATTATTGTGACCAGA
TGGGTAACAAGGGTGCTTTTATACGATTTGAGGCTCCCGATATGAAGCCAAATATTGTGA
CATTTTCAGCAGTGCCACATCCTGATGTCAAACCAATGGCATATGCCAACAACTTCCTTC
GCATGTTTTCTTAAAAACTCTGGAACCTAACGTTCAGTATTACAATCGATGCGACCTTTT
GTCTGACTGACCAAGAGCATACACATCAGGAGGCAAAAGAGCTAGTACTTACAGCCAATT
AGCTGCAGTGTCATTATTCGGACAACTTCCTGACTTGCCCGCAGCATGTGAGGATCCTCA
CCTCCTTTGTTTTGATTAAGGCGTAAACACTTTCTCTACGATAACAATGTCGTGTGGTGG
ATTGTCCTCTGTATTATTTATATTCCTCTTTGTAAGATTGTTACACTTCTCATTTCTTTT
AGAATGTTCAAATTGGGAAAAGCTTTGATAAGTCGAATTTTGGTTTTTTCTATTTTCTTA
GTTAAAATAGTCTATAATTTTTTCCCCACCCAATCAGCCAAGTGTTACTGTTACGATGTC
TATTTTACCATTGGATTGTCGTTTGTCTGTGCCTGTGGCCAGATTACTGGTGTTTCCTAC
TGATTTTGTTTCGTTATTAATAATGCTTAACAGCTTCTAATGAGTCGATGCAAATCCTAT
CAATTTGTAAAGTTTGTACCATTTAAACGTAAAACTTATGGGTCATTCCGTAGGATTTAC
AAAAATAGTGTTAAAAGTTATAATTAGTTATGTTTATATTTCTTACGAAGTGATTTATAT
AATATATATATATATGTGTGTGGGGAAAAGTTTTGAGCAGCTACTTTGTCTTTAATCATG
CTAATGCGTACATTAAAATTTTTGCTTTACTAATAACATGAATTCTCAGGCATTAGGTAT
TATACATACTTTAACAGTAAATAAGGTGTATGTACATAGGTTGAAAACGTATCTTGTTTG
GTACCATTCTATTAGGTAGTATGCTATACATAGAAAAATCATGGTAGCAAAGATTGATGT
TGTAAGCAAAAAGTTACTTTTAAAAATTATATAATGCATGTGAAATAATTACGAGGTAAA
TGGTGAAATTACTCGCAAATTCAACACGATACATAATTTTTGTACTCAACTAAGTCTAGT
GCTTTTGGAAA