Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g055140.3.1
CDS Infomation

DUF688 family protein (AHRD V3.3 *** G7JCM3_MEDTR)
Sequence

ATGTTGCTAAAGAATCTCATGGAGGACAAGCAGCTGAATTTGGATCAACCGTTTCTGTCA
GTAAGACGAGCCTCTCCAACAGTGGCTTCTGGGAGTGATGAGACAAAGAAGACTGAATAT
TCTCTCCCCTCCGTAACTCATCCTCCTCGTTACAAATCAGAACTGAAGTCAGGTCCAGTG
AGGAATCCAGGAGTTGTGCCATTCCGCTGGGAACAGAGCCCTGGAAAACCCAAGTATGAA
AGCAAACGGCAAATTCGTGCTACTGAGAAACCACCTATTGCCCCGAGACTTCCCCCAGGG
AGGAAGCTGAAAGATATCCAGGATTCTGATAAAGCTCATGAAAGTCAAAATGTTAGTGAA
AGCCAAACAGGAAATGCTCAACATTTCACACCGAGTTGCATGAATTTGGATGAAAAGGTG
AAGAAGATTGAGAGTATTGACTGCTCAAAAGATATGATACAGGATATGGAAAAATGTGAT
TCAGAAGATGCTGATGAAGTATATTTGGATGCCTCCAATACACTTTCAAGAACTGAATCA
TTCTTCGTGAATTGTAGTGTAAGCGGCTTAAGTGGATTAGACGAACCAGAAGCAAAACTA
TCTGGTACTTCTTTAAGAGATCCACAAGCTAGAGATTTCATGATTGATCGGTTTCTGCCA
GCAGCCAAGGCCATGGCTTCAGAAAAGTCTTTAGAAACGCCTCAGTATGCTCCCAGGAAG
CAACCAGCTGTTCAGGAGCAACCAAGACAACTCAAGAAAGTACTAAATGGGGATAAGAGG
CCTCAGCTGCGCTATGGACCTAGTTTTGCACTTCGTTATTCCCAATTCCATGATAACTAT
GAAGAAGAAAGTGATGATGATAGTTGTTATGATGGAAATCTACCTACCAAAGTTTGTGGA
TTATTGCCTCGTTTTTGCTTGAAAAGTTCGTTTTGTCTGATGAATCCTATACCTGGAATG
AGTGCTAGAACCAGAGTACCAATGTCTCCTGCCAGTAGAACACAGACTGGATCATCATCT
ACCGCTTCTTGCAGTGGATCAGAGAATGAGCCGCTTATGTTGTCAGTCCAAATCTGA

Peptide Sequence

PEP ID

Solyc07g055140.3.1
PEP Infomation

DUF688 family protein (AHRD V3.3 *** G7JCM3_MEDTR)
Sequence

MLLKNLMEDKQLNLDQPFLSVRRASPTVASGSDETKKTEYSLPSVTHPPRYKSELKSGPV
RNPGVVPFRWEQSPGKPKYESKRQIRATEKPPIAPRLPPGRKLKDIQDSDKAHESQNVSE
SQTGNAQHFTPSCMNLDEKVKKIESIDCSKDMIQDMEKCDSEDADEVYLDASNTLSRTES
FFVNCSVSGLSGLDEPEAKLSGTSLRDPQARDFMIDRFLPAAKAMASEKSLETPQYAPRK
QPAVQEQPRQLKKVLNGDKRPQLRYGPSFALRYSQFHDNYEEESDDDSCYDGNLPTKVCG
LLPRFCLKSSFCLMNPIPGMSARTRVPMSPASRTQTGSSSTASCSGSENEPLMLSVQI*

Transcript Sequence

Transcript ID

Solyc07g055140.3.1
Transcript Infomation

DUF688 family protein (AHRD V3.3 *** G7JCM3_MEDTR)
Sequence

ATCTCCGTGTAAGATAACTATAAGATATCTAGCTTTAAAGAACCATTAGTTTGCCAAAAT
AGCCCAACTAGGGATAGCGATGATTATTGCTTCTCTTAGAGAAGCTGACAAATATAAACA
TGCATTTACTCAGTTATGTAGTGTTCGGAGGAGTAACAATAATCTGCATTAATTCAACCA
TTGTTATTGAGGAAAGTATCATTTGTTATATTGTTCGTGTTGTTATATATAGCAGTAGCA
GTAAGTGTGACAGATTGATGGTTATACCTGCAGAAATAAGGTGTTTCTATGTTGCTAAAG
AATCTCGTCTGACAGATTGATGGTTATACCTGCAGAAATAAGGAGTTTTGATGTTGCTAA
AGAATCTCATGGAGGACAAGCAGCTGAATTTGGATCAACCGTTTCTGTCAGTAAGACGAG
CCTCTCCAACAGTGGCTTCTGGGAGTGATGAGACAAAGAAGACTGAATATTCTCTCCCCT
CCGTAACTCATCCTCCTCGTTACAAATCAGAACTGAAGTCAGGTCCAGTGAGGAATCCAG
GAGTTGTGCCATTCCGCTGGGAACAGAGCCCTGGAAAACCCAAGTATGAAAGCAAACGGC
AAATTCGTGCTACTGAGAAACCACCTATTGCCCCGAGACTTCCCCCAGGGAGGAAGCTGA
AAGATATCCAGGATTCTGATAAAGCTCATGAAAGTCAAAATGTTAGTGAAAGCCAAACAG
GAAATGCTCAACATTTCACACCGAGTTGCATGAATTTGGATGAAAAGGTGAAGAAGATTG
AGAGTATTGACTGCTCAAAAGATATGATACAGGATATGGAAAAATGTGATTCAGAAGATG
CTGATGAAGTATATTTGGATGCCTCCAATACACTTTCAAGAACTGAATCATTCTTCGTGA
ATTGTAGTGTAAGCGGCTTAAGTGGATTAGACGAACCAGAAGCAAAACTATCTGGTACTT
CTTTAAGAGATCCACAAGCTAGAGATTTCATGATTGATCGGTTTCTGCCAGCAGCCAAGG
CCATGGCTTCAGAAAAGTCTTTAGAAACGCCTCAGTATGCTCCCAGGAAGCAACCAGCTG
TTCAGGAGCAACCAAGACAACTCAAGAAAGTACTAAATGGGGATAAGAGGCCTCAGCTGC
GCTATGGACCTAGTTTTGCACTTCGTTATTCCCAATTCCATGATAACTATGAAGAAGAAA
GTGATGATGATAGTTGTTATGATGGAAATCTACCTACCAAAGTTTGTGGATTATTGCCTC
GTTTTTGCTTGAAAAGTTCGTTTTGTCTGATGAATCCTATACCTGGAATGAGTGCTAGAA
CCAGAGTACCAATGTCTCCTGCCAGTAGAACACAGACTGGATCATCATCTACCGCTTCTT
GCAGTGGATCAGAGAATGAGCCGCTTATGTTGTCAGTCCAAATCTGAGTCAGTGGCCGGA
TTTGTCACAGTTCATGCGCATGAGGACACAAATGATCGCTTTCAAGAATTATTTGATTAT
CAGAACATTGCAGGTGAAGCGGATTTAGCAGCTCCTCTGGCAGAGAAAACTCTGCATGTA
GATATTGTACATAAGGTGGAATCTCCAATTATGAAATCACCTCCTAAAGCGGAGAGACCA
TTTAACTTACAGGATGAGAATCAAGATGTTCTTAAAAAGATGGCAGAACAAAAGCCCTCT
GTCGATTCTTCACTTAGTTATTTTCCACCAATATCAGCGGAAAAATTGAACAATGGAGGG
GAAATGATGGCACTGACAGCTTCTGAACAAGCTCATTACCAGGATGCAGTCACCTCAGTG
AAACGCAAAGATGATGTTAAACGAAGTACCAGAAAGCAAACAGTACGAAAAGAAAAGTTA
GAAAACTCACGCGTAACACATTCAAAGCTTCCTGCTCCCCCTCCTTTACCAAAATCTCCA
TCTGATTCATGGCTTTGCCGTACTTTGCCTTCACTGTCCACGAAAAATCCATCTTCAAGA
TCATATGTTGGGACAGGAATAAGTCCTAACAACCAATCTTGTAAGCCACTATGTAGTGAT
CCCAAGTGGGAAACAATTGTTAAAACAACAAAGGGACATCAACAGCATTTGCGATATACT
GAGGAAATGATGACATTGACACCTATACCAGAAGCTCAATAGAAGACATAGAGGTTGTTT
CCCATGCTTTCCCCGCGTAAATGAAATAAGTTCCTCGGGTAAAACTATCAATACAACTGG
TTGCAAGATGATTGAAAATATTCAGTTTTTGTCTGATTTTACACTACCAATTTCCAGTTT
ATGATGGGTTTATAAATGTAAGTTTTGTGCCCAAGTTCATATTCTGTTATTTACACCATG
TGATAGGAGTCTTTGTACAGGTGTTTATAAGAGTAAACTTGAAGTCCCCTTATATATGAG
TTGATTCATAATAAAAAAAGTTTTCTGGTTTTATGCACACATTCCATGTTTTCTGATTGA
CCATTACTTGTACAATTTACTTAACA