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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g055110.3.1
CDS Infomation

Protein PATRONUS 1 (AHRD V3.3 *** PANS1_ARATH)
Sequence

ATGGCAAAGAATCTCATTCAGAGGCCTCTTATATTTCAAGATGAAAACTCGGACATATAC
TTCAAAAAGGGTTGGATATCTGGCAAATCAAAGAGTGGTAAACCTGAAGCTCTTAAAAAA
GGTATCACAGGGCTTAAAAGTCGTAATGCCCTCAATGACATCACGAACAAATCAACTGCC
CTTCCTGAAGAAGCAGCAAAGAAAAAGAGTTCACAGAAGGAGGTTAAAGTTCCAAGTGAG
CTTAACATAGCAGAGGAGACATTTCAACATGATCACAAAAAATGTGTTGAGGCACAACGT
TCAGGAATCACGCGAAAACATTTCATGGAATTGGTTCTGCCTGGTTGTGATTCAGCCTCT
CATATTGACATACCAAAAACAGAAATGGGAATGAATGATAAAGGAATCGATAACTCACAC
TGCTATCCCGTGCCAGAAGAATTGTCTATGTCAGAGTTCTCTTGGTTGAAATCTTCATGG
GATCCATCTTCTCCCAAGAAGAGGGATTCTCCACCCTTCTCTCCTTCTGAGTTGGCGTTT
GAGCCTGTCGAATTTACACTTAATGAAGAAAAAGATTGCTGA

Peptide Sequence

PEP ID

Solyc07g055110.3.1
PEP Infomation

Protein PATRONUS 1 (AHRD V3.3 *** PANS1_ARATH)
Sequence

MAKNLIQRPLIFQDENSDIYFKKGWISGKSKSGKPEALKKGITGLKSRNALNDITNKSTA
LPEEAAKKKSSQKEVKVPSELNIAEETFQHDHKKCVEAQRSGITRKHFMELVLPGCDSAS
HIDIPKTEMGMNDKGIDNSHCYPVPEELSMSEFSWLKSSWDPSSPKKRDSPPFSPSELAF
EPVEFTLNEEKDC*

Transcript Sequence

Transcript ID

Solyc07g055110.3.1
Transcript Infomation

Protein PATRONUS 1 (AHRD V3.3 *** PANS1_ARATH)
Sequence

TTCCTAAATTAGTGTAATTTCTTTAAGGTTCTCCAAACATATTCAAATTTATATTTTTGG
GCCCAATTCTAAATTAGGAAATGAAACCCAAAATATTCAATTGGGCTTCAACTTCCAGTT
AAAAGTCGGGTTCTTTTCCGAATTTGAATTGTATTCATCTCCCGCCCTTGTCCTAATCGA
CACCACTATCCGCCGGGCGCCGGCAAACTATTTTTCCGGTGAAATCGAGTTGCATAATTT
GATTGAGTGCGATAATCATGGCAAAGAATCTCATTCAGAGGCCTCTTATATTTCAAGATG
AAAACTCGGACATATACTTCAAAAAGGGTTGGATATCTGGCAAATCAAAGAGTGGTAAAC
CTGAAGCTCTTAAAAAAGGTATCACAGGGCTTAAAAGTCGTAATGCCCTCAATGACATCA
CGAACAAATCAACTGCCCTTCCTGAAGAAGCAGCAAAGAAAAAGAGTTCACAGAAGGAGG
TTAAAGTTCCAAGTGAGCTTAACATAGCAGAGGAGACATTTCAACATGATCACAAAAAAT
GTGTTGAGGCACAACGTTCAGGAATCACGCGAAAACATTTCATGGAATTGGTTCTGCCTG
GTTGTGATTCAGCCTCTCATATTGACATACCAAAAACAGAAATGGGAATGAATGATAAAG
GAATCGATAACTCACACTGCTATCCCGTGCCAGAAGAATTGTCTATGTCAGAGTTCTCTT
GGTTGAAATCTTCATGGGATCCATCTTCTCCCAAGAAGAGGGATTCTCCACCCTTCTCTC
CTTCTGAGTTGGCGTTTGAGCCTGTCGAATTTACACTTAATGAAGAAAAAGATTGCTGAA
ATGGCCAGTGAGCTGCTCTATTTAGTCAATGACAAGTATATGATATTAGGTAACTAACAA
TTTTAAATTTGGCACTAGTAATCCAACAGTTATGGAGTATTATTTACATTTCAGCTTTTT
ACTAACTGTGGGAGACTTGTCTGAAATTAGTTTGAGCTAAGTTGTGTGAGTTTGTAATCT
GAAATGACAAGTAGTGTGTGAATTCGTGATGGTTTGTTCTGAATTTTGCTCAATGCATGA
ACCTTTTTGTGTTTACACATGGTTCGGCGAAGAGCCTCTTCCAAACGAGGTGTAAAGTAG
GCAACTACCTTGACAAGATATTAGTGATTGATTCTACGATTCGAATAAGTGATAGAGACA
ACTTTACTTTTGCTTCAACATTTTCATTT