Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g054610.3.1
CDS Infomation

F-box/RNI-like superfamily protein (AHRD V3.3 *-* AT3G58860.1)
Sequence

ATGACGAAACGAAGAAGGTCTCAGGACAGAATTTCCGATTTGCCAGAAGAATCAGTGAAC
GGTATTTCCGATTTGCCAGAAGAATCAGTGAACGGTATTTCCAATTTGCCAGAAGAATCA
GCGAACGAAATTTCCAATTTGCCAGAAGAATCAGTGAACGGTATTTCCAATTTGCCAGAA
GAATCAGTGAACGGTATTTCCAATTTGCCAGAAGAATCAGTGAACGAAATTTCCAATTTG
CCAGAAGATTCAGTGAACGGTATTTCCAATTTGCCAGAAGAATCAGTGAACGAAATTTCC
AATTTGCCAGAAGAATCAGTGAACAGAATTTCCAATTCGCCAGTGGACAGAATTTCGAAT
TTGCCAGTGAACGGTATGTCGAATTCGCCAGTGAACAGAGTTTCCAATTCGCCATTGGAC
AGAATTTCGAATTTGCCAACGGATATAATCCGTGAAATTCAGTCTTATCTTCCATGGAAA
GTTGGCGCGAAATTCAATATTTTGTCGAAAATATGGCGAAGAATTTGGGCTTCTCATCCT
AGAATTATTTTGGACGAAATGGATTTTGGTGCCGACTATTCAGAATATCGTGTTTCAGAT
AAAGCTAAAAGAGTTGCCTTCTTGAGTTACTTGATCAAGTTGTTAGAAAGCCGTAAGAGT
CCCTCTGAATACGATTGTGATATTGACAAACTCTTTCTTCGAATGACAACACTTGAAGAC
TCTCCTCCTCCTAAAAATCTGGTAAAGAAGTGGATTTGTTTTGCCTTGGAAAAAAACGTT
AAATTGTTATCTCTTGCTTTAAAGACGATTTACCCTAATCATTACTACCTGCATGGTATT
GCATTTTGCTCTACTACATTAGTTGATTTAACTATATCCGATTGTCACATTACGAATTGT
TCATTCAAGCTTCCTGCTCTTAAGTTTCTCTTTCTATTCGTTGTTTGCATTGAGGATCAT
CATTTCAAGGATCTCATTGCTGCTTGTCCTCGAATTGAAAAACTACGTGTTCTGGATACT
CAAAAATTGCATACTATTGTAGTTTCAAATCCTCAACTGAAATCTTTCGGAGTTCATCTT
CCTTGTTCTGATGGTAAAATACGTATAGAGTCCCAAAATCTTCATTCACTTGAATTTATT
TCATTCATTGTGGACTTGTGTGAATTAGAGATTACTTCCACAACAACCGTAAGAGAGTTG
ACATTGCGAAAAGCTTATCATCAAGAGACAGTGATGCATTTTATGAAAAAATTCCCTCTA
CTTGAGAAACTCAAGATAGATGATTGCACTATCTTAAGTGAAGCTGAGATTAATCCATTG
CCAACAGTACGGAATTTGACATTGCGAAGAGCTTATCATGAAGAGACATTGTTGAATTTT
ATAGGAAAATTCCCTCTACTTGAGAAACTCGAGATAGATGATTGCAGTATCTTAAGTGAA
GCTGAGATTAATCCAATGCCAACGGTACAGAAGTTGACATTGCGTAATGTTTGTCAAGAA
AATACGGCATGGGCGGTTTTTTTAGAAAAATTCCCTCTACTTGAGAAACTCCTGATAGAT
GATTGTGATATGGTAAGTGAATTTGAGACTGGTCCATTGCCAACAGTAAGGAATCTGACA
TTGTGTAATGTTAGAGAAAAATATACGACATGGACGGATTTTATCAACAAATTCACTCTA
CTTGAGAAACTGATCATAGCTGATTGTAAGTTGCAAATGCTTCATCTTTCTCAACCAAAT
TTGGCTAGCTTGGTGCTGATGGATTGCATTGTAGAAGACGAGGTACAAATAAATTCATCC
AAGTTAAAATCGTTGGAGTTCAAGGGTCGTCTCACAAAAATTAAGGGCATAGAAGATCTG
AAAGAATTGGAATTCGTTAAGGTATATTTAGATCCTGTAAGGCTTTCTAAATGCTGGTAC
AGATGGTTTAGGGATATTTTGAAGTCGTGTGCTCGTTCCAAGCATTTGAGTGTGATCTGC
AATAGTAAAAAGGTTATCATCAATCCTAAATATGTAACAGACATATTGCCAGTAACTAAT
ATGGAGCATCTGGAGTTGGAAATTATTTCACGTCATGGTACTTTTGAAGAGGTTATAGAT
GACTTCATTAGTATCCTTCCAGATTTGAAGACTTTGTCATTGACTTTGGGTTACACCACA
AAGTTCTTCCAGTTTAGTAGAGCGGATAATGTGCTCTCAGCAAAAGAAGTGCCCAATCCA
AACCTGATAAGATTTTGA

Peptide Sequence

PEP ID

Solyc07g054610.3.1
PEP Infomation

F-box/RNI-like superfamily protein (AHRD V3.3 *-* AT3G58860.1)
Sequence

MTKRRRSQDRISDLPEESVNGISDLPEESVNGISNLPEESANEISNLPEESVNGISNLPE
ESVNGISNLPEESVNEISNLPEDSVNGISNLPEESVNEISNLPEESVNRISNSPVDRISN
LPVNGMSNSPVNRVSNSPLDRISNLPTDIIREIQSYLPWKVGAKFNILSKIWRRIWASHP
RIILDEMDFGADYSEYRVSDKAKRVAFLSYLIKLLESRKSPSEYDCDIDKLFLRMTTLED
SPPPKNLVKKWICFALEKNVKLLSLALKTIYPNHYYLHGIAFCSTTLVDLTISDCHITNC
SFKLPALKFLFLFVVCIEDHHFKDLIAACPRIEKLRVLDTQKLHTIVVSNPQLKSFGVHL
PCSDGKIRIESQNLHSLEFISFIVDLCELEITSTTTVRELTLRKAYHQETVMHFMKKFPL
LEKLKIDDCTILSEAEINPLPTVRNLTLRRAYHEETLLNFIGKFPLLEKLEIDDCSILSE
AEINPMPTVQKLTLRNVCQENTAWAVFLEKFPLLEKLLIDDCDMVSEFETGPLPTVRNLT
LCNVREKYTTWTDFINKFTLLEKLIIADCKLQMLHLSQPNLASLVLMDCIVEDEVQINSS
KLKSLEFKGRLTKIKGIEDLKELEFVKVYLDPVRLSKCWYRWFRDILKSCARSKHLSVIC
NSKKVIINPKYVTDILPVTNMEHLELEIISRHGTFEEVIDDFISILPDLKTLSLTLGYTT
KFFQFSRADNVLSAKEVPNPNLIRF*

Transcript Sequence

Transcript ID

Solyc07g054610.3.1
Transcript Infomation

F-box/RNI-like superfamily protein (AHRD V3.3 *-* AT3G58860.1)
Sequence

ATGACGAAACGAAGAAGGTCTCAGGACAGAATTTCCGATTTGCCAGAAGAATCAGTGAAC
GGTATTTCCGATTTGCCAGAAGAATCAGTGAACGGTATTTCCAATTTGCCAGAAGAATCA
GCGAACGAAATTTCCAATTTGCCAGAAGAATCAGTGAACGGTATTTCCAATTTGCCAGAA
GAATCAGTGAACGGTATTTCCAATTTGCCAGAAGAATCAGTGAACGAAATTTCCAATTTG
CCAGAAGATTCAGTGAACGGTATTTCCAATTTGCCAGAAGAATCAGTGAACGAAATTTCC
AATTTGCCAGAAGAATCAGTGAACAGAATTTCCAATTCGCCAGTGGACAGAATTTCGAAT
TTGCCAGTGAACGGTATGTCGAATTCGCCAGTGAACAGAGTTTCCAATTCGCCATTGGAC
AGAATTTCGAATTTGCCAACGGATATAATCCGTGAAATTCAGTCTTATCTTCCATGGAAA
GTTGGCGCGAAATTCAATATTTTGTCGAAAATATGGCGAAGAATTTGGGCTTCTCATCCT
AGAATTATTTTGGACGAAATGGATTTTGGTGCCGACTATTCAGAATATCGTGTTTCAGAT
AAAGCTAAAAGAGTTGCCTTCTTGAGTTACTTGATCAAGTTGTTAGAAAGCCGTAAGAGT
CCCTCTGAATACGATTGTGATATTGACAAACTCTTTCTTCGAATGACAACACTTGAAGAC
TCTCCTCCTCCTAAAAATCTGGTAAAGAAGTGGATTTGTTTTGCCTTGGAAAAAAACGTT
AAATTGTTATCTCTTGCTTTAAAGACGATTTACCCTAATCATTACTACCTGCATGGTATT
GCATTTTGCTCTACTACATTAGTTGATTTAACTATATCCGATTGTCACATTACGAATTGT
TCATTCAAGCTTCCTGCTCTTAAGTTTCTCTTTCTATTCGTTGTTTGCATTGAGGATCAT
CATTTCAAGGATCTCATTGCTGCTTGTCCTCGAATTGAAAAACTACGTGTTCTGGATACT
CAAAAATTGCATACTATTGTAGTTTCAAATCCTCAACTGAAATCTTTCGGAGTTCATCTT
CCTTGTTCTGATGGTAAAATACGTATAGAGTCCCAAAATCTTCATTCACTTGAATTTATT
TCATTCATTGTGGACTTGTGTGAATTAGAGATTACTTCCACAACAACCGTAAGAGAGTTG
ACATTGCGAAAAGCTTATCATCAAGAGACAGTGATGCATTTTATGAAAAAATTCCCTCTA
CTTGAGAAACTCAAGATAGATGATTGCACTATCTTAAGTGAAGCTGAGATTAATCCATTG
CCAACAGTACGGAATTTGACATTGCGAAGAGCTTATCATGAAGAGACATTGTTGAATTTT
ATAGGAAAATTCCCTCTACTTGAGAAACTCGAGATAGATGATTGCAGTATCTTAAGTGAA
GCTGAGATTAATCCAATGCCAACGGTACAGAAGTTGACATTGCGTAATGTTTGTCAAGAA
AATACGGCATGGGCGGTTTTTTTAGAAAAATTCCCTCTACTTGAGAAACTCCTGATAGAT
GATTGTGATATGGTAAGTGAATTTGAGACTGGTCCATTGCCAACAGTAAGGAATCTGACA
TTGTGTAATGTTAGAGAAAAATATACGACATGGACGGATTTTATCAACAAATTCACTCTA
CTTGAGAAACTGATCATAGCTGATTGTAAGTTGCAAATGCTTCATCTTTCTCAACCAAAT
TTGGCTAGCTTGGTGCTGATGGATTGCATTGTAGAAGACGAGGTACAAATAAATTCATCC
AAGTTAAAATCGTTGGAGTTCAAGGGTCGTCTCACAAAAATTAAGGGCATAGAAGATCTG
AAAGAATTGGAATTCGTTAAGGTATATTTAGATCCTGTAAGGCTTTCTAAATGCTGGTAC
AGATGGTTTAGGGATATTTTGAAGTCGTGTGCTCGTTCCAAGCATTTGAGTGTGATCTGC
AATAGTAAAAAGGTTATCATCAATCCTAAATATGTAACAGACATATTGCCAGTAACTAAT
ATGGAGCATCTGGAGTTGGAAATTATTTCACGTCATGGTACTTTTGAAGAGGTTATAGAT
GACTTCATTAGTATCCTTCCAGATTTGAAGACTTTGTCATTGACTTTGGGTTACACCACA
AAGTTCTTCCAGTTTAGTAGAGCGGATAATGTGCTCTCAGCAAAAGAAGTGCCCAATCCA
AACCTGATAAGATTTTGAGATTGGAGAAGTTGTGCAGCCAAATAATTGTTCCATGATTTG
AAAGAATGCTTTTGTTCTGCTTCTTTTGACAAAAACTGATGAAGTTACTGTTTGTTTCTG
TACATTTCGGAGAAGAAATATTTTGCTCATTCAAGGTTGATTTGCTATGTTTCATTACTC
TATTTCGTATTTTTTACAACAAGTCTCATTTTTATTCTTTTTTATTGAGCATGAAATTAT
TCAGAGAATAGATGCACTGAAGTTTCCACCTTATTAGCACCACATAGGCAGCATTTGTCA
TCTTCAACTGGTATTTGCAACCTACACTTCCTCTCTTTCCTTAGCAGCTTACCTTGATAG
AAAATTTTGTTGAGGTTATACAGTTCATCACTAATCGTATGAATGTCTTCGGAAAGCCAT
AGCCCTGTAGTGCCTCCTCAATGAACTCCCATATCATAAGCCTTCCCTGAGGTCTCTATC
TTCATCATACACCGCGGGGATGTCTTTCTCTTGTAATGCCTTAGAAGGTCGTAACATATC
AACACATTATGCACTAGTGACCTTCCTGTAACAAAGGCTGCCTGATTTTCTGCGACAATA
TAGCTAACAGCTCCTTCCACAGATCATCTTGGAAATTATCTTGTACAACACATTACAACA
TGATATAGGTCTGAATTGGCCTGCATTTTGAGGGGTTAGTGATATCACAGTAGCATTCAA
CTGTTGCAGTAGCTTACCATTTTTAAATAGTTGCATTTTTATAGTCATGAATGGATAAAA
AAATAAATCATGCGACAAGATTGTCTAATTTATTTTAATGAGAAATGGAGCGTGAAATAT
ATGTATTGTTTAAGTAAAGCTCTAGAATTAGTATCCTTGAATGACAGTTTCTTTCAATTA
TAAAACAGTTCTTAAACAGTACTTC