Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g054600.3.1
CDS Infomation

F-box family protein (AHRD V3.3 *-* T1RU12_SILVU)
Sequence

ATGGACAGAATATCGAATTTGCCAATTGAAATCATCCGTGAAATTCAGAGTCGTCTTCCA
CGGATCTATGCAGTGAAAACTAGTATTTTGTCGAAAAAATGGCAAAGAATCTGGGCTTCT
CACCCTAAAATTTTGTTGGACGAAATTGATTTTGGTGCCGACAATTCACGATACAGAGCT
AAAGATAAACCCAAAAGAGAGGCCTTCTTAACTTACTTGATTAAGTCGTTAGAAATCCGT
GAGAGGCACAAAAATTGTGAAGTTGACGAACTCTTTCTTCGAATGATAGTTGATTCTGAT
GCTGATGAACTGCTCGTAAGCAAGTGGATTTCTTTTGCCTTGGAAAATAGCATTAAAAGG
TTATGTCTCAGTTTACAAACGATTCGTCGTGATCATTACCATCTGTATGGTGTTGCATTT
TGTTCTCATAAATTAGTTGATCTAATACTATCGGATTGTAAGATTAAAAATTGTTCCTTT
AAGCTTCCTGCTCTTAAGTTACTCTTTCTATTTGTTGTTCGCATTGAGGATGATGATTTT
AAGGATCTCATAGCTGGATGCCCACTGATTGAACAGTTACGGGTTCAGGACACTAAAAAG
TTGCGTACTATTAATCTAGTTTCAAATCCTAACCTGCAATTCTTTGGAGTGCATCTTCCT
TGTCCTCATGGTGGTGGTAAAATTCGTATAGAATCCCCAAATCTTCATTCACTTGAATTC
ATTTCATTCAACATACACCTGTGTGAATTAGAGATTATGTCCACCACAACCGTACGAAAG
TTGACGTTGCTACATGCTTATGACCCAGAAACATTTATAGAAAAATTCCCTCTACTTGAC
AAACTCGTCCTAGATACTTGCGGTTGGTCGCAAAAACTTCATATTTCTCAACCGAATTTG
GTTAGCTTGGTGCTCAAGGATAGCACTGTGCGGCGGGAGGTAAGAATAGATTCACCCAAG
TTAAAATCATTGGAGTATAAGGGTGGCCTCACAGATTTTACGGGCATACAAGATTTACAA
GAATTGGAATTCGTTCTGTTATATCTAGATCTCCTTAAGCTTCCTGATAACTGGTACAGT
TGGTTTAGAGATATTTTGGAGTCGTGTGCTCGTTCCAAAACTTTGAGTTTGATCTGCGAT
ATTCAAGAGGTTGTCCTCATTCCTGTTAAGGTAACTGATATATTACCAGTAAATGATATC
AAGAATCTGGAGTTAGAAATTAAAACACGTCATGGTACTTTTGAAGTGGTTATAGCTGAG
CTCATCAGTATGCTTCCAGATTTGAAGACTTTGTCATTGACTTTGGGTTCCACCACAAAG
TTCTTTAAGTTTTCGTAG

Peptide Sequence

PEP ID

Solyc07g054600.3.1
PEP Infomation

F-box family protein (AHRD V3.3 *-* T1RU12_SILVU)
Sequence

MDRISNLPIEIIREIQSRLPRIYAVKTSILSKKWQRIWASHPKILLDEIDFGADNSRYRA
KDKPKREAFLTYLIKSLEIRERHKNCEVDELFLRMIVDSDADELLVSKWISFALENSIKR
LCLSLQTIRRDHYHLYGVAFCSHKLVDLILSDCKIKNCSFKLPALKLLFLFVVRIEDDDF
KDLIAGCPLIEQLRVQDTKKLRTINLVSNPNLQFFGVHLPCPHGGGKIRIESPNLHSLEF
ISFNIHLCELEIMSTTTVRKLTLLHAYDPETFIEKFPLLDKLVLDTCGWSQKLHISQPNL
VSLVLKDSTVRREVRIDSPKLKSLEYKGGLTDFTGIQDLQELEFVLLYLDLLKLPDNWYS
WFRDILESCARSKTLSLICDIQEVVLIPVKVTDILPVNDIKNLELEIKTRHGTFEVVIAE
LISMLPDLKTLSLTLGSTTKFFKFS*

Transcript Sequence

Transcript ID

Solyc07g054600.3.1
Transcript Infomation

F-box family protein (AHRD V3.3 *-* T1RU12_SILVU)
Sequence

ACAAAGACACAGCCTTATGTAAATAGAGAATATAAATTGAGATCCTAAACCTAAAAGTTG
AGTCTGAAAATATAACGGCGATGGACAGAATATCGAATTTGCCAATTGAAATCATCCGTG
AAATTCAGAGTCGTCTTCCACGGATCTATGCAGTGAAAACTAGTATTTTGTCGAAAAAAT
GGCAAAGAATCTGGGCTTCTCACCCTAAAATTTTGTTGGACGAAATTGATTTTGGTGCCG
ACAATTCACGATACAGAGCTAAAGATAAACCCAAAAGAGAGGCCTTCTTAACTTACTTGA
TTAAGTCGTTAGAAATCCGTGAGAGGCACAAAAATTGTGAAGTTGACGAACTCTTTCTTC
GAATGATAGTTGATTCTGATGCTGATGAACTGCTCGTAAGCAAGTGGATTTCTTTTGCCT
TGGAAAATAGCATTAAAAGGTTATGTCTCAGTTTACAAACGATTCGTCGTGATCATTACC
ATCTGTATGGTGTTGCATTTTGTTCTCATAAATTAGTTGATCTAATACTATCGGATTGTA
AGATTAAAAATTGTTCCTTTAAGCTTCCTGCTCTTAAGTTACTCTTTCTATTTGTTGTTC
GCATTGAGGATGATGATTTTAAGGATCTCATAGCTGGATGCCCACTGATTGAACAGTTAC
GGGTTCAGGACACTAAAAAGTTGCGTACTATTAATCTAGTTTCAAATCCTAACCTGCAAT
TCTTTGGAGTGCATCTTCCTTGTCCTCATGGTGGTGGTAAAATTCGTATAGAATCCCCAA
ATCTTCATTCACTTGAATTCATTTCATTCAACATACACCTGTGTGAATTAGAGATTATGT
CCACCACAACCGTACGAAAGTTGACGTTGCTACATGCTTATGACCCAGAAACATTTATAG
AAAAATTCCCTCTACTTGACAAACTCGTCCTAGATACTTGCGGTTGGTCGCAAAAACTTC
ATATTTCTCAACCGAATTTGGTTAGCTTGGTGCTCAAGGATAGCACTGTGCGGCGGGAGG
TAAGAATAGATTCACCCAAGTTAAAATCATTGGAGTATAAGGGTGGCCTCACAGATTTTA
CGGGCATACAAGATTTACAAGAATTGGAATTCGTTCTGTTATATCTAGATCTCCTTAAGC
TTCCTGATAACTGGTACAGTTGGTTTAGAGATATTTTGGAGTCGTGTGCTCGTTCCAAAA
CTTTGAGTTTGATCTGCGATATTCAAGAGGTTGTCCTCATTCCTGTTAAGGTAACTGATA
TATTACCAGTAAATGATATCAAGAATCTGGAGTTAGAAATTAAAACACGTCATGGTACTT
TTGAAGTGGTTATAGCTGAGCTCATCAGTATGCTTCCAGATTTGAAGACTTTGTCATTGA
CTTTGGGTTCCACCACAAAGTTCTTTAAGTTTTCGTAG