Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g054580.3.1
CDS Infomation

Indole-3-acetic acid-amido synthetase GH3.5, putative (AHRD V3.3 *** B9RW45_RICCO)
Sequence

ATGACGAATATTAACTGTAAGGATAAAATAGAAACTGACATCATAGGATGGTTCGATGAA
GTCGCCGACGATTCCGCCGTTGTTCAACGGCGGACGCTTCGGCGAATTCTTGAAATGAAT
CATGGTGTGGAGTATCTTAAGAAATGGATTGGAGATATTAAAATTGAAGAAATTGATGAA
AATTTATTGGAGTCAACTTATGCTTCTTTAGTCCCTCTTGCTTCTCATGCAGATATTGAG
CCTTTTACAAAGAGAATTGCTGATGGAGATACAACTCCTCTACTCACTCAACAACCCATT
ACAAATCTATCATTAAGTTCAGGAACCACAGATGGAAGACAAAAATTTGTGCCCTTTACC
CACCATAGCTCTCAAACTACTCTTCAGATTTTCAAGTTGGCAGCAGCATATAGATCAAGG
ATATATCCAATAAGAAGAGGAGGAAGAATTCTTGAATTTATATATAGCAGCAAACAATGT
AAAACAAAAGGAGGAATAATAGTAGGAACAGCCACAACACACTATTATGCTAGTGATGAA
TTCAAGATTAAACAACAGCAAACAAAGTCATTCACTTGTAGCCCTCAAGAAGTTATTTCA
TGTGGAGATTATAAACAATCAACATATTGTCACCTCCTTCTTGGCTTATATTTTTCACAT
GAAGTTGAATTTGTTACATCAGCTTTTGCTTATAGCATAGTTGAAGCATTTAGATCATTT
GAAGAAATGTGGAAGGAATTGTGCCATGACATTAGGGAAGGTAGTCTTAGCTCAATAATC
AACATTGATAAAGTCCGAAAATCTGTGTCAGGTATCACTCAGCCTAATCCAGAGTTGGCT
TCAAGAATTGAATCAATTTGTGTGGAGCTAGAAAGGGCAGATTGGTTTAGCATAATCCCA
AAATTATGGCCAAATGCTAAATATGTTTACTCAATAATGACAGGATCAATGATGCCATAT
TTAACAAAATTAAGACATTATGCTGGGGAATTACCTCTAGTGAGTGCTGATTATGGATCC
ACTGAGAGTTGGATTGGAGTTAATTTGGATCCATCTAATCCACCAGAAAAAGTTACTTTT
GCAGTTGTACCAACTTTTTCTTACTTTGAGTTTATACCCCTTTATAAACACAAGTCAAAT
TATAATTACCAAAACGTAAATCTTAATTCAACAAATGATGATTACATAGAAGGTAATTCG
ATGCCCTTGTGTCAAGTCAAGAGTGGACAACAATATGAAATCGTCATAACAACTTTTACA
GGTCTTTATAGATATAGATTAGGGGATGTGGTAGAAGTTGATGGTTTTTACAAGAAAACC
CCTAAACTCAACTTCATATGCAGGAGAAATCTGATATTAGCAATAAACATCGATAAGAAT
ACTGAAAAAGACCTCCAATTAGTAGTGGAGAGAGGCGCACGAATACTAAGCAAGGGCACA
AGACGAGCCGAGCTAGTAGATTTCACGAGCCATGCAAACGTGACAAAGCAACCGGGTCAC
TATGTGATTTATTGGGAAATCAAAGGAGAAATCGATGAAAAGGTACTCGATGAGTGTTGT
AGAGATATGGATGCTTCGTTTGTAGATCATGGTTATGTTGTGTCAAGAAGAACAAAATCC
ATTGGTCCATTAGAGTTATGCATTGTAGAGAGAGGCACTTTCAAGAAAATATTGGAATCT
TACATAGGAAATGGGGCTGCATTGAGTCAATTCAAGACTCCTAGATGCACTAGCAACAAA
GAGTTACTAAATATCCTCAATGTTTGTACCATTAAGAGGTTTTATAGCACAGCTTATGGG
TAG

Peptide Sequence

PEP ID

Solyc07g054580.3.1
PEP Infomation

Indole-3-acetic acid-amido synthetase GH3.5, putative (AHRD V3.3 *** B9RW45_RICCO)
Sequence

MTNINCKDKIETDIIGWFDEVADDSAVVQRRTLRRILEMNHGVEYLKKWIGDIKIEEIDE
NLLESTYASLVPLASHADIEPFTKRIADGDTTPLLTQQPITNLSLSSGTTDGRQKFVPFT
HHSSQTTLQIFKLAAAYRSRIYPIRRGGRILEFIYSSKQCKTKGGIIVGTATTHYYASDE
FKIKQQQTKSFTCSPQEVISCGDYKQSTYCHLLLGLYFSHEVEFVTSAFAYSIVEAFRSF
EEMWKELCHDIREGSLSSIINIDKVRKSVSGITQPNPELASRIESICVELERADWFSIIP
KLWPNAKYVYSIMTGSMMPYLTKLRHYAGELPLVSADYGSTESWIGVNLDPSNPPEKVTF
AVVPTFSYFEFIPLYKHKSNYNYQNVNLNSTNDDYIEGNSMPLCQVKSGQQYEIVITTFT
GLYRYRLGDVVEVDGFYKKTPKLNFICRRNLILAINIDKNTEKDLQLVVERGARILSKGT
RRAELVDFTSHANVTKQPGHYVIYWEIKGEIDEKVLDECCRDMDASFVDHGYVVSRRTKS
IGPLELCIVERGTFKKILESYIGNGAALSQFKTPRCTSNKELLNILNVCTIKRFYSTAYG
*

Transcript Sequence

Transcript ID

Solyc07g054580.3.1
Transcript Infomation

Indole-3-acetic acid-amido synthetase GH3.5, putative (AHRD V3.3 *** B9RW45_RICCO)
Sequence

CATTACATTACATATATACAATTTCTTCCTGCTGGCTGCATGCCTAGCAAAATATGACGA
ATATTAACTGTAAGGATAAAATAGAAACTGACATCATAGGATGGTTCGATGAAGTCGCCG
ACGATTCCGCCGTTGTTCAACGGCGGACGCTTCGGCGAATTCTTGAAATGAATCATGGTG
TGGAGTATCTTAAGAAATGGATTGGAGATATTAAAATTGAAGAAATTGATGAAAATTTAT
TGGAGTCAACTTATGCTTCTTTAGTCCCTCTTGCTTCTCATGCAGATATTGAGCCTTTTA
CAAAGAGAATTGCTGATGGAGATACAACTCCTCTACTCACTCAACAACCCATTACAAATC
TATCATTAAGTTCAGGAACCACAGATGGAAGACAAAAATTTGTGCCCTTTACCCACCATA
GCTCTCAAACTACTCTTCAGATTTTCAAGTTGGCAGCAGCATATAGATCAAGGATATATC
CAATAAGAAGAGGAGGAAGAATTCTTGAATTTATATATAGCAGCAAACAATGTAAAACAA
AAGGAGGAATAATAGTAGGAACAGCCACAACACACTATTATGCTAGTGATGAATTCAAGA
TTAAACAACAGCAAACAAAGTCATTCACTTGTAGCCCTCAAGAAGTTATTTCATGTGGAG
ATTATAAACAATCAACATATTGTCACCTCCTTCTTGGCTTATATTTTTCACATGAAGTTG
AATTTGTTACATCAGCTTTTGCTTATAGCATAGTTGAAGCATTTAGATCATTTGAAGAAA
TGTGGAAGGAATTGTGCCATGACATTAGGGAAGGTAGTCTTAGCTCAATAATCAACATTG
ATAAAGTCCGAAAATCTGTGTCAGGTATCACTCAGCCTAATCCAGAGTTGGCTTCAAGAA
TTGAATCAATTTGTGTGGAGCTAGAAAGGGCAGATTGGTTTAGCATAATCCCAAAATTAT
GGCCAAATGCTAAATATGTTTACTCAATAATGACAGGATCAATGATGCCATATTTAACAA
AATTAAGACATTATGCTGGGGAATTACCTCTAGTGAGTGCTGATTATGGATCCACTGAGA
GTTGGATTGGAGTTAATTTGGATCCATCTAATCCACCAGAAAAAGTTACTTTTGCAGTTG
TACCAACTTTTTCTTACTTTGAGTTTATACCCCTTTATAAACACAAGTCAAATTATAATT
ACCAAAACGTAAATCTTAATTCAACAAATGATGATTACATAGAAGGTAATTCGATGCCCT
TGTGTCAAGTCAAGAGTGGACAACAATATGAAATCGTCATAACAACTTTTACAGGTCTTT
ATAGATATAGATTAGGGGATGTGGTAGAAGTTGATGGTTTTTACAAGAAAACCCCTAAAC
TCAACTTCATATGCAGGAGAAATCTGATATTAGCAATAAACATCGATAAGAATACTGAAA
AAGACCTCCAATTAGTAGTGGAGAGAGGCGCACGAATACTAAGCAAGGGCACAAGACGAG
CCGAGCTAGTAGATTTCACGAGCCATGCAAACGTGACAAAGCAACCGGGTCACTATGTGA
TTTATTGGGAAATCAAAGGAGAAATCGATGAAAAGGTACTCGATGAGTGTTGTAGAGATA
TGGATGCTTCGTTTGTAGATCATGGTTATGTTGTGTCAAGAAGAACAAAATCCATTGGTC
CATTAGAGTTATGCATTGTAGAGAGAGGCACTTTCAAGAAAATATTGGAATCTTACATAG
GAAATGGGGCTGCATTGAGTCAATTCAAGACTCCTAGATGCACTAGCAACAAAGAGTTAC
TAAATATCCTCAATGTTTGTACCATTAAGAGGTTTTATAGCACAGCTTATGGGTAGTAAA
TTAGAATAATGTGGTGATTATGTATTCACGGTTCGTGATATCTTAATTTATGTGACATAT
TTTTATTTGTAATTTAAATAACTTGAATTTTAAAACCAACCACTTCTATCAATATAACCT
AATG