Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g054370.3.1
CDS Infomation

F-box family protein (AHRD V3.3 *** T1RU12_SILVU)
Sequence

ATGAATATGTCTGCAAAACAAAGAAGCACTGTTTTTGACGAAGACCTCTTCAGTGGACTA
CCAGATGCCATCCTCATCCATATTCTCTCCTTGTTGCCATCAAAAGATGTCGTCAACATA
ATGTTAATTAGAAGATTTCATAACCTCTGGCCATTCATCCACACACTCAATTTCGAACAA
TGCATGTGGCCGCGGCACATATGTGGCTGTTATGCTCGAGGTAGTCGTCCAATCTATGAT
GAGAAGTATGTTAACTTCGTCCGTCATGTGCTTCTTCTTCATAAGGGCCCAACTATTCAT
AAGTTCTGCCTTAAGTTACATTTTAGATCATTTTATGAATTTTGGCAAAGAACATCCGGC
AGAACAAACATATGGCAGTATGATATCCTGAGGAGTGAAAAAAGGATGGCTAATGAAATT
GGTACCTGGATCCAGTTCGCACTAAATAAGAATTTAAAGGTCCTTGACTTGTCTTTTTAT
GAGCATGGTACAGACCACCCACATGCGTTTTATGAGCTGCCTAATTGTGTTCTAAGCTGT
CCTCATTTGGTTGAACTCCGGTTGACATACTGTAAGATAAATTTAAAGAGGAACAGTGAG
CTCAAGTCTCTAAAAACATTATATCTTGATAATGTTTTGCTAATGGAACAGTCAATAAAT
TATATTCTATCTGGTTGTCCGATGCTTGAGGAATTGACGCTACAGCTTTGCTATTCCCGT
AAAGGAATGGTTCTGCTCAATTCAAATTTAAAGACATTGAAGCTTCACATTAGATGGTTT
CAACAAAGGATACGTATCTCCTGTCCAACTCTCCTATCATTTGATATGTCTGGAGCTGTG
GAGTTGCTGGATATTTCAAATGTAGCATCTATTGCTGAAGTATCTGTCAAGCGTAATCTA
ATATTTGACTTCAATGAGGACAATAATTACCAAAACATGAGTAAATTCCTCCAAATATTT
AGCGGGGCCAAAACTCTAAAACTATGCTCCTGGCTTGCTCTGGCATTTTCTATGTGGCAG
TTGAACAATCTACCATCTCCAACCTTCAGCTGCAAATCTCTTCATCTTCAATTGGATTTT
GTGATATGGCACCTACCAGGAATACTGAACTTGCTGAAGTGCTGTCCTTGCTTGGAGAAT
CTTATCATCGAAATTACTTCTTACGATGAATTTACACCCTACAATGCACTCTCCTGGATT
CACCTATATGAGTTTGATGCTGGTGAATATCGGAATATGGTAGATGTTCCTGTCCAGTGC
TTGATTGATCACCTCAAGATGGTGAAGGTAGCTGGTATCGTAATGGAGAAACAGATGATT
CAGTTTCTGGAATATTTGCTCGGGCATTCCATGGTGTTACAGAAAATGAAGATATTTGCA
AAAAAGAAAGCCCCTGGTAAGGCTTATGAAACCTCTAACCCAAATAGTCTTATATCTGGT
AAGGCTCATGAAACCTCTCACCCAAATAGTCTTACGTCCGATAAAGCTTCAACCTCTAAC
CCAAATAGTCTTACATCTGATAAGGCTCATGAATATAAAGAGAGGCTTCTGAATGCACCA
AAAGCCTCTGCCGCTGCTGCAGTCTTCTTCTACTGA

Peptide Sequence

PEP ID

Solyc07g054370.3.1
PEP Infomation

F-box family protein (AHRD V3.3 *** T1RU12_SILVU)
Sequence

MNMSAKQRSTVFDEDLFSGLPDAILIHILSLLPSKDVVNIMLIRRFHNLWPFIHTLNFEQ
CMWPRHICGCYARGSRPIYDEKYVNFVRHVLLLHKGPTIHKFCLKLHFRSFYEFWQRTSG
RTNIWQYDILRSEKRMANEIGTWIQFALNKNLKVLDLSFYEHGTDHPHAFYELPNCVLSC
PHLVELRLTYCKINLKRNSELKSLKTLYLDNVLLMEQSINYILSGCPMLEELTLQLCYSR
KGMVLLNSNLKTLKLHIRWFQQRIRISCPTLLSFDMSGAVELLDISNVASIAEVSVKRNL
IFDFNEDNNYQNMSKFLQIFSGAKTLKLCSWLALAFSMWQLNNLPSPTFSCKSLHLQLDF
VIWHLPGILNLLKCCPCLENLIIEITSYDEFTPYNALSWIHLYEFDAGEYRNMVDVPVQC
LIDHLKMVKVAGIVMEKQMIQFLEYLLGHSMVLQKMKIFAKKKAPGKAYETSNPNSLISG
KAHETSHPNSLTSDKASTSNPNSLTSDKAHEYKERLLNAPKASAAAAVFFY*

Transcript Sequence

Transcript ID

Solyc07g054370.3.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** T1RU12_SILVU)
Sequence

AAAGTGATTCCAGATCTACTATTCTGATGGCTCTGTGTTGATCTTGGCAGTAAGAAATGA
ATATGTCTGCAAAACAAAGAAGCACTGTTTTTGACGAAGACCTCTTCAGTGGACTACCAG
ATGCCATCCTCATCCATATTCTCTCCTTGTTGCCATCAAAAGATGTCGTCAACATAATGT
TAATTAGAAGATTTCATAACCTCTGGCCATTCATCCACACACTCAATTTCGAACAATGCA
TGTGGCCGCGGCACATATGTGGCTGTTATGCTCGAGGTAGTCGTCCAATCTATGATGAGA
AGTATGTTAACTTCGTCCGTCATGTGCTTCTTCTTCATAAGGGCCCAACTATTCATAAGT
TCTGCCTTAAGTTACATTTTAGATCATTTTATGAATTTTGGCAAAGAACATCCGGCAGAA
CAAACATATGGCAGTATGATATCCTGAGGAGTGAAAAAAGGATGGCTAATGAAATTGGTA
CCTGGATCCAGTTCGCACTAAATAAGAATTTAAAGGTCCTTGACTTGTCTTTTTATGAGC
ATGGTACAGACCACCCACATGCGTTTTATGAGCTGCCTAATTGTGTTCTAAGCTGTCCTC
ATTTGGTTGAACTCCGGTTGACATACTGTAAGATAAATTTAAAGAGGAACAGTGAGCTCA
AGTCTCTAAAAACATTATATCTTGATAATGTTTTGCTAATGGAACAGTCAATAAATTATA
TTCTATCTGGTTGTCCGATGCTTGAGGAATTGACGCTACAGCTTTGCTATTCCCGTAAAG
GAATGGTTCTGCTCAATTCAAATTTAAAGACATTGAAGCTTCACATTAGATGGTTTCAAC
AAAGGATACGTATCTCCTGTCCAACTCTCCTATCATTTGATATGTCTGGAGCTGTGGAGT
TGCTGGATATTTCAAATGTAGCATCTATTGCTGAAGTATCTGTCAAGCGTAATCTAATAT
TTGACTTCAATGAGGACAATAATTACCAAAACATGAGTAAATTCCTCCAAATATTTAGCG
GGGCCAAAACTCTAAAACTATGCTCCTGGCTTGCTCTGGCATTTTCTATGTGGCAGTTGA
ACAATCTACCATCTCCAACCTTCAGCTGCAAATCTCTTCATCTTCAATTGGATTTTGTGA
TATGGCACCTACCAGGAATACTGAACTTGCTGAAGTGCTGTCCTTGCTTGGAGAATCTTA
TCATCGAAATTACTTCTTACGATGAATTTACACCCTACAATGCACTCTCCTGGATTCACC
TATATGAGTTTGATGCTGGTGAATATCGGAATATGGTAGATGTTCCTGTCCAGTGCTTGA
TTGATCACCTCAAGATGGTGAAGGTAGCTGGTATCGTAATGGAGAAACAGATGATTCAGT
TTCTGGAATATTTGCTCGGGCATTCCATGGTGTTACAGAAAATGAAGATATTTGCAAAAA
AGAAAGCCCCTGGTAAGGCTTATGAAACCTCTAACCCAAATAGTCTTATATCTGGTAAGG
CTCATGAAACCTCTCACCCAAATAGTCTTACGTCCGATAAAGCTTCAACCTCTAACCCAA
ATAGTCTTACATCTGATAAGGCTCATGAATATAAAGAGAGGCTTCTGAATGCACCAAAAG
CCTCTGCCGCTGCTGCAGTCTTCTTCTACTGAGGCGAACCCTTCAGACGTATTTAACAGA
TGCTTTAAGTTCGAACAGTTTGTTTCTGGGAACTCTCTTGCAATAAACAGCTAGCTGTTA
TTGGTATAAGGTGTAAAACTCCTGATAACAATATGCACAATGAATTGTGCTGTGGACACA
ATTTCCTGCATTTTCTGTAATAACTGTTGAACGGCTTTCCTGTTGGATGTTATTAAGTTT
TTCTTCTGTGAAATTGCTTTACATGAGTACCTAGTAGAGGAGAAAGGTAGATTCATGCAT
ACATACACTGACATGCATTTCAT