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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g054080.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1)
Sequence

ATGGCCTTAGAACAGCTGGACACTACCTTTAACAAACACGATACTCCATTAGGGAAATGG
AAGACAATGAACGATGAAGTTGAAGAGAATATTTCTGGTGGTTTTGAATGTAACATATGC
CTGGATCTCGTCCACGACCCTGTGGTAACTTTATGTGGTCACCTCTACTGTTGGCCTTGC
ATCTACAAATGGATTCATTTCCAGAGTGTTCCCTCAGAAAATTTGGATCAGCAGCAACCA
CAGTGCCCTGTATGCAAGGCTGAAGTTTCAGAAAGAACTTTGATTCCACTCTATGGACGC
GGTGGTCAATCTACCAAACCATCTGAAGGAAAGGCTCCGAATCTTGGTATAGTGATCCCA
CAAAGACCTCCTAGTCCAAGATGCGGCGGTCACTTACTGATACCAACTACCGATTCAAGT
CCATCCCATCTACTTCAACGACGAAATGATCAACAACAGTCTCAAACACGTCAATCGCCT
TATCAACCACAAAGCGCCTCACCAGGCACCACAGTTAATATGTTACAACCCTCCATGATT
GGACAAGTGGCCTATGCAAGAATCTTTGGTAATTCATCAACAACTCTGTATGCATACCCA
AACTCTTACAATCTAGCCATCAGCAGTAGTCCAAGAATGAGAAGGCAATTATCACAGGCT
GATAGATCACTTGGGAGAATATGTTTTTTCCTATTTTGTTATGATGTTGTAGTAGATAAG
AAAATGTACATTGAGTATTAA

Peptide Sequence

PEP ID

Solyc07g054080.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1)
Sequence

MALEQLDTTFNKHDTPLGKWKTMNDEVEENISGGFECNICLDLVHDPVVTLCGHLYCWPC
IYKWIHFQSVPSENLDQQQPQCPVCKAEVSERTLIPLYGRGGQSTKPSEGKAPNLGIVIP
QRPPSPRCGGHLLIPTTDSSPSHLLQRRNDQQQSQTRQSPYQPQSASPGTTVNMLQPSMI
GQVAYARIFGNSSTTLYAYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCYDVVVDK
KMYIEY*

Transcript Sequence

Transcript ID

Solyc07g054080.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1)
Sequence

ACTTCTAATTATCCTATACATACAGACCCCTTATATGTATAGGCGAGTCTTGTTAAAGCT
GTGTATATATATATAGAACCAAAAACATTCATCTAATTCATCATCCAATCTACTCTATTA
TTCAAAACCTCTGTTTTCACCTTTTATTTTTGCTTCTAAAACACAAAGGATTCTTAGCTT
TCTCCTTATAAAGACTCAATACTTTGCTTGTGTATTAGTTCAGAAACGTTCTTGATACAA
ATTTACTATTTGGGCATTAGAAGCCAACTTTGTTACATCAACAAGCAGGATATGGCCTTA
GAACAGCTGGACACTACCTTTAACAAACACGATACTCCATTAGGGAAATGGAAGACAATG
AACGATGAAGTTGAAGAGAATATTTCTGGTGGTTTTGAATGTAACATATGCCTGGATCTC
GTCCACGACCCTGTGGTAACTTTATGTGGTCACCTCTACTGTTGGCCTTGCATCTACAAA
TGGATTCATTTCCAGAGTGTTCCCTCAGAAAATTTGGATCAGCAGCAACCACAGTGCCCT
GTATGCAAGGCTGAAGTTTCAGAAAGAACTTTGATTCCACTCTATGGACGCGGTGGTCAA
TCTACCAAACCATCTGAAGGAAAGGCTCCGAATCTTGGTATAGTGATCCCACAAAGACCT
CCTAGTCCAAGATGCGGCGGTCACTTACTGATACCAACTACCGATTCAAGTCCATCCCAT
CTACTTCAACGACGAAATGATCAACAACAGTCTCAAACACGTCAATCGCCTTATCAACCA
CAAAGCGCCTCACCAGGCACCACAGTTAATATGTTACAACCCTCCATGATTGGACAAGTG
GCCTATGCAAGAATCTTTGGTAATTCATCAACAACTCTGTATGCATACCCAAACTCTTAC
AATCTAGCCATCAGCAGTAGTCCAAGAATGAGAAGGCAATTATCACAGGCTGATAGATCA
CTTGGGAGAATATGTTTTTTCCTATTTTGTTATGATGTTGTAGTAGATAAGAAAATGTAC
ATTGAGTATTAA