Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053960.3.1
CDS Infomation

Ubiquitin conjugating enzyme, putative (AHRD V3.3 *** B9RVZ2_RICCO)
Sequence

ATGGACGTTGAAATCGAAGAAATTTCTGCTCATGATGGTTCTGTGAAGGTTAAAGACAAC
AAGGAGGTTATGACTGAGGATAATCCAGATACTGTAGCTGGTTCCACACCTGGATCTACC
GACTCTGGCATTAAGAACAGTTCCAATTTAGACATTACATTTCATGAGGATGAGAATGAC
GGAGATGATGGGTTGGATGATTGTGATGATATGTCAAACTATGATGACGACGACGATGAC
TATATGTATTATGATGATGAGGAAGATGAATGTGATTACTTGAGTATGCAAGCACAATTT
GATAATGTTGATTTGCCCGCTGGTGTTGAGGCAACAGTTTCTTGGTTAAATGAACCTGCT
CCTAGTTCAAAAGTGTCTTCCCAAGCTAGCTCTTCAAGTCATCTAGCAGGTGCTCAGACA
TTGAATTCTACACTTTCTGAGCATGCAAGTAGTAGCTTTGCTCAGGTCCCTGCTTCAAGC
AGTTCTCTGGTGTCTGGAGGATCAAATTCCTGTGGGAAGGAAGAGGTAACTGAAGATGAA
CTCATGAAAAAGTATCGAAGTTTTAAGCATTTTGATGTGGTAGAGGACTTCTCGGATCAT
CATTACAGTAACTTGGGCGTCAAGGGACAACAGCCACCTAAGGCCTGGAGCAAGAAAGTT
CAGGATGAGTGGAAAATATTGGAAAATGATTTACCTGATACAATATATGTAAGGGTCTAC
GAAGCAAGGATGGATCTCCTTAGGGCTGTCATCATTGGGCCACAAGGCACTCCATACCAT
GATGGTCTCTTTGTCTTTGATGTCCTGTTCCCTCAAAATTACCCTGATGTTCCACCGATG
GTTTACTACTATTCTGGTGGTTTGAGACTGAATCCCAACTTGTATGATTGTGGAAAAGTC
TGTCTCAGTCTTCTGAACACTTGGACTGGTAAAGGTAACGAGAGGTGGATGCCCAATTCA
TCGACCATGCTGCAAGTCTTGGTTTCCATACAAGCTCTAATTTTGAATTCAAAGCCTTTC
TTTAATGAGCCTGGATATGAAGCTTCATATGCTGGACCTGAGGGACAGAGGAGATCTAAC
TCTTACAATGAAGATGTTTTTGTTCTATCTTTGAAAACAATGACATATACGTTGAGGAGG
CCACCAAAGCATTTTGAAGACCTTGTCAAAGGTCATTTCCGTTGCCATGCTGTAGACATT
CTCTCTGCATGCAAGGCATATATAGAAGGAGCTCCAGTTGGTTCAGTGGTCAACGGAATA
GTCCAGGATCTTAGTGCAACTGCAGAGAAGAGCTCAGTAACATTCAGAGAATCAGTATCC
AGAATGAAGAATGGTCTTATATCCCTTTTCACTAAGAATGGTGCCAATGATTGTGACCGG
TTTCGCGCCTAA

Peptide Sequence

PEP ID

Solyc07g053960.3.1
PEP Infomation

Ubiquitin conjugating enzyme, putative (AHRD V3.3 *** B9RVZ2_RICCO)
Sequence

MDVEIEEISAHDGSVKVKDNKEVMTEDNPDTVAGSTPGSTDSGIKNSSNLDITFHEDEND
GDDGLDDCDDMSNYDDDDDDYMYYDDEEDECDYLSMQAQFDNVDLPAGVEATVSWLNEPA
PSSKVSSQASSSSHLAGAQTLNSTLSEHASSSFAQVPASSSSLVSGGSNSCGKEEVTEDE
LMKKYRSFKHFDVVEDFSDHHYSNLGVKGQQPPKAWSKKVQDEWKILENDLPDTIYVRVY
EARMDLLRAVIIGPQGTPYHDGLFVFDVLFPQNYPDVPPMVYYYSGGLRLNPNLYDCGKV
CLSLLNTWTGKGNERWMPNSSTMLQVLVSIQALILNSKPFFNEPGYEASYAGPEGQRRSN
SYNEDVFVLSLKTMTYTLRRPPKHFEDLVKGHFRCHAVDILSACKAYIEGAPVGSVVNGI
VQDLSATAEKSSVTFRESVSRMKNGLISLFTKNGANDCDRFRA*

Transcript Sequence

Transcript ID

Solyc07g053960.3.1
Transcript Infomation

Ubiquitin conjugating enzyme, putative (AHRD V3.3 *** B9RVZ2_RICCO)
Sequence

CGTGTTCCTTCTAGCGTACGATTAGAAACGTATTTCATAAGGCAACAAAAATATCGCTCT
CTCTAAAACCCGAATAGTTCATAGTGATAGTGTGTTTGTTAGGGTTTTTGACATCACTGA
GAAATTTTTTGTGAAAAAATTGAAATCGCTGCGCTGCAATGGACGTTGAAATCGAAGAAA
TTTCTGCTCATGATGGTTCTGTGAAGGTTAAAGACAACAAGGAGGTTATGACTGAGGATA
ATCCAGATACTGTAGCTGGTTCCACACCTGGATCTACCGACTCTGGCATTAAGAACAGTT
CCAATTTAGACATTACATTTCATGAGGATGAGAATGACGGAGATGATGGGTTGGATGATT
GTGATGATATGTCAAACTATGATGACGACGACGATGACTATATGTATTATGATGATGAGG
AAGATGAATGTGATTACTTGAGTATGCAAGCACAATTTGATAATGTTGATTTGCCCGCTG
GTGTTGAGGCAACAGTTTCTTGGTTAAATGAACCTGCTCCTAGTTCAAAAGTGTCTTCCC
AAGCTAGCTCTTCAAGTCATCTAGCAGGTGCTCAGACATTGAATTCTACACTTTCTGAGC
ATGCAAGTAGTAGCTTTGCTCAGGTCCCTGCTTCAAGCAGTTCTCTGGTGTCTGGAGGAT
CAAATTCCTGTGGGAAGGAAGAGGTAACTGAAGATGAACTCATGAAAAAGTATCGAAGTT
TTAAGCATTTTGATGTGGTAGAGGACTTCTCGGATCATCATTACAGTAACTTGGGCGTCA
AGGGACAACAGCCACCTAAGGCCTGGAGCAAGAAAGTTCAGGATGAGTGGAAAATATTGG
AAAATGATTTACCTGATACAATATATGTAAGGGTCTACGAAGCAAGGATGGATCTCCTTA
GGGCTGTCATCATTGGGCCACAAGGCACTCCATACCATGATGGTCTCTTTGTCTTTGATG
TCCTGTTCCCTCAAAATTACCCTGATGTTCCACCGATGGTTTACTACTATTCTGGTGGTT
TGAGACTGAATCCCAACTTGTATGATTGTGGAAAAGTCTGTCTCAGTCTTCTGAACACTT
GGACTGGTAAAGGTAACGAGAGGTGGATGCCCAATTCATCGACCATGCTGCAAGTCTTGG
TTTCCATACAAGCTCTAATTTTGAATTCAAAGCCTTTCTTTAATGAGCCTGGATATGAAG
CTTCATATGCTGGACCTGAGGGACAGAGGAGATCTAACTCTTACAATGAAGATGTTTTTG
TTCTATCTTTGAAAACAATGACATATACGTTGAGGAGGCCACCAAAGCATTTTGAAGACC
TTGTCAAAGGTCATTTCCGTTGCCATGCTGTAGACATTCTCTCTGCATGCAAGGCATATA
TAGAAGGAGCTCCAGTTGGTTCAGTGGTCAACGGAATAGTCCAGGATCTTAGTGCAACTG
CAGAGAAGAGCTCAGTAACATTCAGAGAATCAGTATCCAGAATGAAGAATGGTCTTATAT
CCCTTTTCACTAAGAATGGTGCCAATGATTGTGACCGGTTTCGCGCCTAAGCCTACAAGG
ATTCATCAACTAAATTTCATATGAAAATCACATGTTGCGCTTGCAGAATGGGTCCATTTT
CGCCTGCTTGATTCCCCCTCCTCCATTCACAATTTCGTGTACATAATAGCTCTAATTTTT
TTAATCTAAGATAAAACCGTATGTCTTTGTGCTGCTGTAGTAGGAAGTTGGCTTATTGTA
AGTGGAAATTAAATCGCACAAGGGATCTAGAGCTTATTCTGGACATATACTTTTGTAGAG
AATTGATCATAATATCTTAATATTCCAGAGAACATAACTGTGTCTATTTCTTTCCAATGG
TGCTCTTGGGTTTATTCAAATAATTTTACATCATACATTTTTGTGATTTGCACTCAGTGT
GCCTTCGCTGTAATTTCTTTCCAATAGCGAGAGGCCATGGATGTTTACCCTGGATCAACG
CAACAGCAAGTCTGCATCTTTCATCAAAAAGAGCGATATTTGTTGTAAAACTTTATCTAT
AGCTACGAAGTATAATATTTTAAAACTAGTTGTATAAAGTAAACACATATTACATATTGA
AAAAATATGCTCAATAGAAAACTGAATTATTAGAAATAAGATTACAATTAAACTTGTTCG
TAACAATTTGGCAATGTATATTTCTGTTGATAGTACTATGTCAATCTCGATAACATTATA
TTTTGGGGCCTAATTTAATTCAAAATCTCCTTCCTCGAACCCCATGTATAGCGAAAGTTT
AGTTTAGGACACAAGACTGCCCGAAATAGAGAGAAGAAAGATGCAACTGTAAATGAAAAA
TCGTTTAAATCCATTCCTCATGTTTTCATTTAAATGTTTGAGAAGCAGAGTGAAAAAACT
ACAAACAAATCATCGTACAATATCTGAGTAATACAGCAGCGTGTGATGCTGATAAATAAC
ATCTAGGAATGGAGTGGAACAGCTACAATCTTGTCGTAGGCTCGATGGAATTTATACACA
ACACATAACAATTCGCGATACATACTCATAACTAGTTGGAAATGTACATTGCCAATTTGG
CTTCACCACCAAAATAACTCAACTTCTGATGTTCACAGGACTGCATAAGGCTGAGATTAA
AGGAAAAAATTAACAGTTACAGAGTCGACAGATTAATCGTTTCTATCAAATTTACAATCA
GAAATATTGATGAAGTTACCAGCATGAAGAAAAGGAGGAGTAAACTTATGGATCGTCATG
GGAGCATTCTGTTAGTTCAGAACTCAGCATGTGATGCAGGAGGAAATCTACTCGCTGGCT
CCGAGTCTTAGTGCTGTGTAATGAAAGAAGTTGCCAGTCAGATAAATGGTTTACATAAAG
TTTTTCCCATATTTCAACATTAGTCAATCAAACTTACCCAACATTACGTCTCCGCTCACT
TCTTGATTCCTGAATTACACAAAGAATTCAGGTTCACATGAGTACATATTATTAACAAAG
ACGACACTGTTAACTGTTAAGTAACAGAAAAAAGAGATGTAGATCTCCAAGATTAGTACC
AATTGGTTCGTTTAATGAGGACTTGGTTCAAGACTAAAGGATCAAACAGAGGGTAGGCTA
GTAGAAAAACGTAAAGTCTAGAACTGTTTTGAGGATTATAGAGTGATGAAAAAGGTTAGA
ATACTATTATGTATGTTCTGATAAGTGCTGTTTTTTGTAAATGCAGATTTGAATGCCGAG
GGATTTAAAAATAGGAGGAAGTGAGGGAAGGTAAATAAACAGGGTTTACAGTAGGGAAAA
AGAAACAAATTATACTCGGAGTTTAGGTTCGTGACATTTGTTGGAGTCATTTCCATGTGC
TACAGCAGTTAGCAGTGATATTTTTGTCAATGATTTGAATAAAATGTTCTGTTTATTCTT
TTTTGAAGAGTGACCAAGGCTGGTAGATCATGAAGGAATTAGTCTCTTTCTGAACTTCAC
TGGCTATAAATTTCACGAGTGTAAATAATAAATAGCATTTCTATGATGAAACGAAGAACT
CCAACAACTCGCTAGAGTCTGCCAAGATGTTCCTGTCTGCAAATGAATACGCTAGTAATA
ATAGACTCGCTGCATGAGAACCAGCTGATGCAGGCTCATAAACTAACCTTGTCATCACCA
TCCGCACAGTTTGCTGCAGCCTCTAGATCCATTTCTGCTTGGAAAGCTTCCAAGACAAAT
GCTACAATCTGAAAAGAGTCCAAGCAAAGGTTAAGTAATCGTTTAGCAATTATCATTTAT
TGATGAAGTATTTTTTTGTCGTTTCAGCACTGGTCTTTGCTAAAGGACTATACTGAGTAT
AAACACATAGGATAGAAGAAAGTGTTCGAACACAAGAAAAGTAATGATAAGATCAATTAA
AAAGATGCAGTATTACAACTTCTGTAATTTTAAGTTTCTAAAATATACCCCTAAATGGAT
TTCATTTTTTTAAAAAAACTATTTGTCACTTCCTTAGACGAGATA