Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053820.3.1
CDS Infomation

Mad3/BUB1 homology region 1 (AHRD V3.3 *** A0A103XTQ9_CYNCS)
Sequence

ATGGCAATGGCCGTCATTTCAAAAAATCAAAGCAATACAACTAGCTCCGACGACCCGTTA
TTGCCTTGGTTATGGTCAATTGAGAAATCACTGAAAGAGCGAACGTCAATTGATGGAAGA
GATCTGCATGAGCTTTGCTCGAACTGCATCAGTACCTTTAAGAACAATCCTCGGTACCGA
AACGACGTCAGATTTCTCAAGATTTGGTTCCTATATATGGATAGCAGTTCGAATCACGAA
AGCATATATAGAGAAATTGAGCAGAATAAGATTTGTCTGTTCAATTCTTTGCTTTACGAG
ACATATGCGTTATTCCTAGAGGCAAAAGGGAGGTTAATTGATGCATTTCTCATTTACCAT
TTGGGAATTTCAAGGAATGCTGAGCCTTTGGGCAGATTGAAGAAGGCACAAGTGTTGTTT
CTTGAGAGAATGTCTGAGAAAGTAACAGCTGGTTCATTACAGAAGATGGACATTGTGTCG
GAGAATGGTGGATCTTGTGTCAATCCATGGGTGATCTCAACAATTAAAAATCTGTTGCAG
AAGAAGAATACTGAGATAATAAGATATGATGGATACCATCCAAGCAAAAAGGCGTATTCA
GGAAAGGTAGCACTGTCAACTTTGCAGAAATCTGCCAGGAATAAAACTATTGATATAGGT
GGATACAGCTATCAGATCAAGGGATGTGCAGGTCAGGGAGGATTTGCTCAAGTATTTAAA
GCATGTTGTGATGGTAATCCAGATGAGGTTGTCGCACTTAAGATTCAAAAGCCAGCTTTC
CCGTGGGAATTCTACATTTATCGTCAACTGGATATGAGAATTCCTGAAAAAGAAAGGTTA
AGCTTTGGGTATGCCCACAGATTGCATCTATATTCGGACTACAGCATACTTGTTTCTGAC
TTCCTGGCTAATGGCACACTTCAGGATGCAATCAATTCCAATGTTGTGCTTGGTGGGGCC
ATGGAGGAAGTATTATGCATTTATTACACCATTGAGATGCTCTGCATTTTAGAAATTTTG
CATGATACCCGGATTATTCATGGCGACTTCAAACCAGATAATCTTCTGATTCGTTATGCA
AGGGACAATCTGGCAGATGACGTGGAAAATTTTCGTCACCGTACTGGTTCATGGAGGGAA
CAGGGACTTAGCCTTGTTGACTGGGGACGGGGTATAGACCTGAGTCTTTTCCCTGACCAG
ACCGAGTTTATAGGGGACAGTCGAACTTCTGGTTTCCGCTGCATCCAAATGCAAGAACAA
AAACCATGGAAGTATCAGGTGGATGCATATGGCCTCTGTGTTATTGTACACATGATGCTT
CACAATTCATATATGGAGATTGAGAGAAGACCTTCTCCCCATGGTGGCCATAGTTATCAA
CCTAAGTTGCCTTTTAAGCGATACTGGAAAGTTGAACTCTGGAAGAACCTATTCACCACG
TTACTTAACATAGACCACACTGAAGATCATAAGAACATGTTGAAAAGCTTGAGGGAATCA
TTCCAGGATTATATGTACTCAAATCCTCAGCTGATTAAAAAGCTTAGGCAGTTGCTGGCA
AAGCAAAAAACTTCCTTATGTTCTTCATAG

Peptide Sequence

PEP ID

Solyc07g053820.3.1
PEP Infomation

Mad3/BUB1 homology region 1 (AHRD V3.3 *** A0A103XTQ9_CYNCS)
Sequence

MAMAVISKNQSNTTSSDDPLLPWLWSIEKSLKERTSIDGRDLHELCSNCISTFKNNPRYR
NDVRFLKIWFLYMDSSSNHESIYREIEQNKICLFNSLLYETYALFLEAKGRLIDAFLIYH
LGISRNAEPLGRLKKAQVLFLERMSEKVTAGSLQKMDIVSENGGSCVNPWVISTIKNLLQ
KKNTEIIRYDGYHPSKKAYSGKVALSTLQKSARNKTIDIGGYSYQIKGCAGQGGFAQVFK
ACCDGNPDEVVALKIQKPAFPWEFYIYRQLDMRIPEKERLSFGYAHRLHLYSDYSILVSD
FLANGTLQDAINSNVVLGGAMEEVLCIYYTIEMLCILEILHDTRIIHGDFKPDNLLIRYA
RDNLADDVENFRHRTGSWREQGLSLVDWGRGIDLSLFPDQTEFIGDSRTSGFRCIQMQEQ
KPWKYQVDAYGLCVIVHMMLHNSYMEIERRPSPHGGHSYQPKLPFKRYWKVELWKNLFTT
LLNIDHTEDHKNMLKSLRESFQDYMYSNPQLIKKLRQLLAKQKTSLCSS*

Transcript Sequence

Transcript ID

Solyc07g053820.3.1
Transcript Infomation

Mad3/BUB1 homology region 1 (AHRD V3.3 *** A0A103XTQ9_CYNCS)
Sequence

TTTTTTTTTGAATATTATAAGAATGTATTTTGTTTACTTATATAATATAAGGATGTTGGA
GAAATATTTTAGTCCGAAACTCACAACAAAATTCAAATACATTGTATTCCCGCCCGTTTC
ATCTCCCTGAACCAGTAGGACAATTTTTCATTTTCCGGCGAGTGAGGCTGAATCAGATGG
CAATGGCCGTCATTTCAAAAAATCAAAGCAATACAACTAGCTCCGACGACCCGTTATTGC
CTTGGTTATGGTCAATTGAGAAATCACTGAAAGAGCGAACGTCAATTGATGGAAGAGATC
TGCATGAGCTTTGCTCGAACTGCATCAGTACCTTTAAGAACAATCCTCGGTACCGAAACG
ACGTCAGATTTCTCAAGATTTGGTTCCTATATATGGATAGCAGTTCGAATCACGAAAGCA
TATATAGAGAAATTGAGCAGAATAAGATTTGTCTGTTCAATTCTTTGCTTTACGAGACAT
ATGCGTTATTCCTAGAGGCAAAAGGGAGGTTAATTGATGCATTTCTCATTTACCATTTGG
GAATTTCAAGGAATGCTGAGCCTTTGGGCAGATTGAAGAAGGCACAAGTGTTGTTTCTTG
AGAGAATGTCTGAGAAAGTAACAGCTGGTTCATTACAGAAGATGGACATTGTGTCGGAGA
ATGGTGGATCTTGTGTCAATCCATGGGTGATCTCAACAATTAAAAATCTGTTGCAGAAGA
AGAATACTGAGATAATAAGATATGATGGATACCATCCAAGCAAAAAGGCGTATTCAGGAA
AGGTAGCACTGTCAACTTTGCAGAAATCTGCCAGGAATAAAACTATTGATATAGGTGGAT
ACAGCTATCAGATCAAGGGATGTGCAGGTCAGGGAGGATTTGCTCAAGTATTTAAAGCAT
GTTGTGATGGTAATCCAGATGAGGTTGTCGCACTTAAGATTCAAAAGCCAGCTTTCCCGT
GGGAATTCTACATTTATCGTCAACTGGATATGAGAATTCCTGAAAAAGAAAGGTTAAGCT
TTGGGTATGCCCACAGATTGCATCTATATTCGGACTACAGCATACTTGTTTCTGACTTCC
TGGCTAATGGCACACTTCAGGATGCAATCAATTCCAATGTTGTGCTTGGTGGGGCCATGG
AGGAAGTATTATGCATTTATTACACCATTGAGATGCTCTGCATTTTAGAAATTTTGCATG
ATACCCGGATTATTCATGGCGACTTCAAACCAGATAATCTTCTGATTCGTTATGCAAGGG
ACAATCTGGCAGATGACGTGGAAAATTTTCGTCACCGTACTGGTTCATGGAGGGAACAGG
GACTTAGCCTTGTTGACTGGGGACGGGGTATAGACCTGAGTCTTTTCCCTGACCAGACCG
AGTTTATAGGGGACAGTCGAACTTCTGGTTTCCGCTGCATCCAAATGCAAGAACAAAAAC
CATGGAAGTATCAGGTGGATGCATATGGCCTCTGTGTTATTGTACACATGATGCTTCACA
ATTCATATATGGAGATTGAGAGAAGACCTTCTCCCCATGGTGGCCATAGTTATCAACCTA
AGTTGCCTTTTAAGCGATACTGGAAAGTTGAACTCTGGAAGAACCTATTCACCACGTTAC
TTAACATAGACCACACTGAAGATCATAAGAACATGTTGAAAAGCTTGAGGGAATCATTCC
AGGATTATATGTACTCAAATCCTCAGCTGATTAAAAAGCTTAGGCAGTTGCTGGCAAAGC
AAAAAACTTCCTTATGTTCTTCATAGAGACGGTCTGTAGAAAAATGCGCCCTGAAGCAGT
TCAATGTGTCAAAGCCTCATTGATTTACGAAACTGTATACGTTCATGCTGATATATCAAG
GCGTTGTGGGGATTGGCCTACAAAGCTTAATGATATTCATGAATCTGCAGAACTGTAGTT
GCTGCTGTCCCCGTCTTTCCGAAATTATTTTTCAGGAAAGATAGGCTAGACTTGTATGTG
TCATTTGTATCCAAAAACAACATATAACTGGTGTTGTTAACATTTGAATTCCTATGTGAC
TTGCAATTGAGTAGGAAGCAAACTTCTACTGATCAGATATTGTAACTGTATTCGCTACAA
TGTGAAACTTTACTTGGAACTTCTCCAATAATTTATGTTAATTTTGGGACAACTCCCAAG
TGTTATCTTCATTTCAATTTATAAAAGGTTTC