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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053640.1.1
CDS Infomation

LOW QUALITY:Arabinogalactan-protein (AHRD V3.3 *-* Q41256_NICAL)
Sequence

ATGGGGCATTTTATCAAGCAAGTGGTGTGCATTCTGTTCTTGGTGATTTCAACTCCGTCT
GTGCAAATTGAAGCTAGAAATAGCAAGTTTATGATAATTCCTACATCTCCTTCACCTGCT
CCTACTCCGATTTCTAATGAAATTAGTTTCCCTCCTTTTTCATCGTTAAGTCCAACACCA
GCACCAGCACCAACACCGGACTTTAATGATTTTGGATTTCCTCCTTTGTCGTTTTTAAGT
CCAACACCATCACCGATAGAGGGTGATCAAGATCCTGGTTTGCCAACACCGGCGGGGGCA
CCGGAGGAAGGTGATATTGAAGCACCAGCACCACTTTTGAGTGACACTCCTTATGGACTT
TATGGTCCTCATGCTCAGGAAGTTCCTTCTACTACTCTCACAAATTTTGATGATGTAGAA
AAGGAATTACAAGGTGCCCGTTTCAACACGGACGAGTCCTACAATAACAATAACAACAAC
AATAACAATGGATACTCTGATAATTACAACTACGATAGCCACTCGAAGAATTACAACAAC
AATGATGGTCACTCGGAGAATTACAATAACAACAATGGGTATTCCCAAAATTACAACAAC
AATGATTTCTCCGAGACTTACAACAACAACGACGATGCTTTCTCAGAGAATCACAACAAC
AACAATGATGCTTTCTCGGAGAATCACAACAACAACAATGATGGTTTTTCGGAGAATTAC
AACAACCTCAACCATAACAACAATGATTTCTCCGAAAAATACAACCACAACAACAATGAT
TTCTCCGAGAATTACAACAACAACAACAATGTTTTCTCCAAGAATTACAACAATAACAAT
GATTTCTCCGAGAAATACAACAACAACAACAATGTTTTCTCCGAGAATTACAACAACAAC
AACAATGATTTCTCCGAGAAATACAACAACAACAACAAACTCTACTCTGAGAATAATAAC
AACAACAACAACGACGACAATAGCTACTCCAAGAATTACAACAGCAACAATGATTTCTCC
GAGAATTACAACAACAACAACAATGGTTTCTCTGAAAATTACAACAACAATGACTTCTCG
GGGAATTACAAAACTAACAACAACAACAATGTTTTCTCTGAGAATTACAACAACAACGGG
TACTCCAATAGTTACAACAACAACAACAACAACAACAGATACTCTGAGAATATGTCAGAG
AGGCAAGGATTAAGCGACACAAGATTCTTGAACAATGGCAAGTACTACTATGACATCAAG
AATGACAATCCCAACAACAACAATGATCATGCTAACAGCTACAATAACAATGCAAATATG
GTGGAAACTCAAGGATTCAGTGAGACACGATTTTCGGACAATGGCAACTACTTTTATGGT
AAAAATGGTGAGAAAATGACCATGGAAGAGTTCAAAAGACAACAGGACTATCCAGGCACT
GAGGATCAGTATGAACTTCCTTGA

Peptide Sequence

PEP ID

Solyc07g053640.1.1
PEP Infomation

LOW QUALITY:Arabinogalactan-protein (AHRD V3.3 *-* Q41256_NICAL)
Sequence

MGHFIKQVVCILFLVISTPSVQIEARNSKFMIIPTSPSPAPTPISNEISFPPFSSLSPTP
APAPTPDFNDFGFPPLSFLSPTPSPIEGDQDPGLPTPAGAPEEGDIEAPAPLLSDTPYGL
YGPHAQEVPSTTLTNFDDVEKELQGARFNTDESYNNNNNNNNNGYSDNYNYDSHSKNYNN
NDGHSENYNNNNGYSQNYNNNDFSETYNNNDDAFSENHNNNNDAFSENHNNNNDGFSENY
NNLNHNNNDFSEKYNHNNNDFSENYNNNNNVFSKNYNNNNDFSEKYNNNNNVFSENYNNN
NNDFSEKYNNNNKLYSENNNNNNNDDNSYSKNYNSNNDFSENYNNNNNGFSENYNNNDFS
GNYKTNNNNNVFSENYNNNGYSNSYNNNNNNNRYSENMSERQGLSDTRFLNNGKYYYDIK
NDNPNNNNDHANSYNNNANMVETQGFSETRFSDNGNYFYGKNGEKMTMEEFKRQQDYPGT
EDQYELP*

Transcript Sequence

Transcript ID

Solyc07g053640.1.1
Transcript Infomation

LOW QUALITY:Arabinogalactan-protein (AHRD V3.3 *-* Q41256_NICAL)
Sequence

ATGGGGCATTTTATCAAGCAAGTGGTGTGCATTCTGTTCTTGGTGATTTCAACTCCGTCT
GTGCAAATTGAAGCTAGAAATAGCAAGTTTATGATAATTCCTACATCTCCTTCACCTGCT
CCTACTCCGATTTCTAATGAAATTAGTTTCCCTCCTTTTTCATCGTTAAGTCCAACACCA
GCACCAGCACCAACACCGGACTTTAATGATTTTGGATTTCCTCCTTTGTCGTTTTTAAGT
CCAACACCATCACCGATAGAGGGTGATCAAGATCCTGGTTTGCCAACACCGGCGGGGGCA
CCGGAGGAAGGTGATATTGAAGCACCAGCACCACTTTTGAGTGACACTCCTTATGGACTT
TATGGTCCTCATGCTCAGGAAGTTCCTTCTACTACTCTCACAAATTTTGATGATGTAGAA
AAGGAATTACAAGGTGCCCGTTTCAACACGGACGAGTCCTACAATAACAATAACAACAAC
AATAACAATGGATACTCTGATAATTACAACTACGATAGCCACTCGAAGAATTACAACAAC
AATGATGGTCACTCGGAGAATTACAATAACAACAATGGGTATTCCCAAAATTACAACAAC
AATGATTTCTCCGAGACTTACAACAACAACGACGATGCTTTCTCAGAGAATCACAACAAC
AACAATGATGCTTTCTCGGAGAATCACAACAACAACAATGATGGTTTTTCGGAGAATTAC
AACAACCTCAACCATAACAACAATGATTTCTCCGAAAAATACAACCACAACAACAATGAT
TTCTCCGAGAATTACAACAACAACAACAATGTTTTCTCCAAGAATTACAACAATAACAAT
GATTTCTCCGAGAAATACAACAACAACAACAATGTTTTCTCCGAGAATTACAACAACAAC
AACAATGATTTCTCCGAGAAATACAACAACAACAACAAACTCTACTCTGAGAATAATAAC
AACAACAACAACGACGACAATAGCTACTCCAAGAATTACAACAGCAACAATGATTTCTCC
GAGAATTACAACAACAACAACAATGGTTTCTCTGAAAATTACAACAACAATGACTTCTCG
GGGAATTACAAAACTAACAACAACAACAATGTTTTCTCTGAGAATTACAACAACAACGGG
TACTCCAATAGTTACAACAACAACAACAACAACAACAGATACTCTGAGAATATGTCAGAG
AGGCAAGGATTAAGCGACACAAGATTCTTGAACAATGGCAAGTACTACTATGACATCAAG
AATGACAATCCCAACAACAACAATGATCATGCTAACAGCTACAATAACAATGCAAATATG
GTGGAAACTCAAGGATTCAGTGAGACACGATTTTCGGACAATGGCAACTACTTTTATGGT
AAAAATGGTGAGAAAATGACCATGGAAGAGTTCAAAAGACAACAGGACTATCCAGGCACT
GAGGATCAGTATGAACTTCCTTGA