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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053490.3.1
CDS Infomation

Optic atrophy 3 protein (OPA3) (AHRD V3.3 *** A0A061GM20_THECC)
Sequence

ATGATATTACCAGTGTTTAAGCTTGGCACACTTGCCCTCAAATCTTTCTGTAAACCTATC
GGTAATCGAATCAAGAAAGAGGCTGGATATCACCCCAGGTTCAGAAATTTCATCATCAAC
ATTGCCCAGGCAAACCATAGACTGTCAACTAAATTGCAAAGACGTATATATGGTCATGCA
ACTGATGTGGCAATTCGCCCATTAAATGAAGATAAAGCTGTTCAAGCTGCTGCTGATCTC
CTAGGTGAACTCTTTGTGTTCTCGGTCGCTGGAGTGGCCGTTATCTTTGAGGTGCAAAGA
AGTTCCAGATCTGAAGCTAGAAAGGAGGAAGTTCGGAGGAAGGAACTAGAGGCATTGAAA
CAGCGAGACGATGACCTTAGTAGAGAGCTTGAGTTCCTCAAGAACAGAATCGATGAACTG
GAGCGACATTCCAAAACACGAGGATTAAGTAGTATTTTTAGCATCAGTCATGCAGAAAGT
ACCAAGGATAAAGTTAAAGCTGGTTGA

Peptide Sequence

PEP ID

Solyc07g053490.3.1
PEP Infomation

Optic atrophy 3 protein (OPA3) (AHRD V3.3 *** A0A061GM20_THECC)
Sequence

MILPVFKLGTLALKSFCKPIGNRIKKEAGYHPRFRNFIINIAQANHRLSTKLQRRIYGHA
TDVAIRPLNEDKAVQAAADLLGELFVFSVAGVAVIFEVQRSSRSEARKEEVRRKELEALK
QRDDDLSRELEFLKNRIDELERHSKTRGLSSIFSISHAESTKDKVKAG*

Transcript Sequence

Transcript ID

Solyc07g053490.3.1
Transcript Infomation

Optic atrophy 3 protein (OPA3) (AHRD V3.3 *** A0A061GM20_THECC)
Sequence

ATATTTATGTTTTATCTCAATTTTTCACTTTTATTTCTTTCCACTCTCCATGATTGAGAG
CTTCAGAGTGATCAAAACCCTTTTGTGTTTTCTTCAATACTTTTTCTTAACTCTCTAAAA
ATTTCTCTGTTTGTTTTGGGAAGTGAGATCTGATGATATTACCAGTGTTTAAGCTTGGCA
CACTTGCCCTCAAATCTTTCTGTAAACCTATCGGTAATCGAATCAAGAAAGAGGCTGGAT
ATCACCCCAGGTTCAGAAATTTCATCATCAACATTGCCCAGGCAAACCATAGACTGTCAA
CTAAATTGCAAAGACGTATATATGGTCATGCAACTGATGTGGCAATTCGCCCATTAAATG
AAGATAAAGCTGTTCAAGCTGCTGCTGATCTCCTAGGTGAACTCTTTGTGTTCTCGGTCG
CTGGAGTGGCCGTTATCTTTGAGGTGCAAAGAAGTTCCAGATCTGAAGCTAGAAAGGAGG
AAGTTCGGAGGAAGGAACTAGAGGCATTGAAACAGCGAGACGATGACCTTAGTAGAGAGC
TTGAGTTCCTCAAGAACAGAATCGATGAACTGGAGCGACATTCCAAAACACGAGGATTAA
GTAGTATTTTTAGCATCAGTCATGCAGAAAGTACCAAGGATAAAGTTAAAGCTGGTTGAT
CCTCTGCTAGTGTTGTGCTAACATACATACACATTGTAAGACACCCCTCTCCAGTTGAGC
AATAACGACTCAATCTCTATTTTTCTCTACTTCTTATTTCTACTATTATAACTTCTGGAA
GTAAAGAAACTTGAAGCAACTCCGACAAAAGGAAGATTTTCGGAACATGTAAGGTTGACA
GGTGAAAGCCTTTAGAATATTACTAACCAAAATGCATTATCCATTGTTTGCAGCCTTTGG
TCTTTGAATAAAAGGCAACATTTCATATTGTAACCGAATTCGATATTTTGGTGAATTTTT
GCACCTAGCCATTGAGGCAATATTGATGACTATTTCACTTGTTTGGCTTTCAGTTCAGTA
ATAAGAATTATTATTAAGAGTTCATTGTGCGTTCTCCTGAGATGTTCAGGGAGTTTTACC
TCTTAATATAAGAGGATTATGAATGTTTATGTTGCTCGGACTCTCTAA