Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053280.3.1
CDS Infomation

Ketol-acid reductoisomerase (AHRD V3.3 *** K4CFM5_SOLLC)
Sequence

ATGGCGGCGGCGGCGGCAACTTCCTTCTCCATCACCACCTCTACTCCTCCGTCCTCCTCC
GCATCATCAACCAAATCCCTAAAACCTTCGCTTGTTGGTAACTTAGGGTTTCTATCCTCG
TCAACTCCATCGCTTAAGCCTCTCAGAGCTCAAGCCGCCGTTTCATCTAGCAGCTCAAAC
TCCGGCGGAGGCGCGCTTGCGGCTCGCATGGTCGCTGCACCTGCTACCGTCAAAGCTCCT
GCTTCGTTTGATTTTGAAACGTCCGTTTTTAAGAAGGAGAAAGTAACCCTAGCTGGAAAT
GATGAGTACATTGTGAGGGGAGGTAGAGATTTGTTCAAGTATTTGCCGGATGCTTTCAAA
GGAATCAAGCAGATCGGAGTTATCGGCTGGGGTTCTCAGGGACCTGCTCAAGCCCAGAAC
TTGAGGGATTCTCTTGCAGAAATAAAATCTGACATAGTTGTTAAGATTGGTTTAAGAAAG
GGTTCAAGCTCATTTGCGGAGGCCCGCACAGCTGGGTTTACTGAAGAGAATGGAACCCTT
GGTGACATATATGAGACTATCTCTGGCAGTGATCTAGTGCTGCTTTTGATTTCTGATGCT
GCTCAGGCTGATAATTATGAGAAAGTGTTCTCTCACATGAAGCCAAACAGCATACTTGGG
CTTTCACATGGATTCCTCCTTGGCCATTTGCAGTCAATGGGCCTTGACTTCCCAAAGAAC
ATTAGTGTGATTGCTGTATGTCCCAAGGGAATGGGGCCTTCAGTCAGGAGATTATATGTT
CAAGGAAAAGAAGTCAATGGTGCTGGAATTAATTCAAGTTTTGCAGTTCACCAGACTCAC
ACCTTTTACTATCTCCAGGATATTGATGGAAGAGCCACAGATGTTGCTCTTGGGTGGTCT
GTTGCCCTTGGTTCTCCCTTTACTTTTGCTACTACTCTAGAGCAGGAATATAAAAGTGAC
ATTTTTGGGGAACGAGGCATTTTACTTGGTGCTGTCCATGGAGTTGTGGAGTCGCTTTTC
AGAAGGTACACTGAGAATGGAATGAATGAGGAGCTTGCATACAAGAACACTGTAGAATGC
ATAACAGGAGTCATTTCAAAAACCATATCAACAAAGGGCATGTTGGCTGTGTATGACTCA
TTGACTGAGGAGGGCAAGAAGGAGTTTGAAGCTGCATACAGTGCTTCATTCTACCCCTGC
ATGGAGATTTTGTATGAGTGCTATGAAGATGTAGCTACAGGTAGTGAGATCAGGAGCGTT
GTCTTGGCTGGCCGCCGCTTTTATGAAAAGGAGGGCTTACCTGCCTTCCCAATGGGGAAA
ATTGATCAAACAAGGATGTGGAAGGTTGGTGAGCGCGTCCGAGCAACCCGACCAGCTGGT
GATCTTGGTCCTCTGTATCCATTCACCGCTGGTGTCTTTGTGGCATTGATGATGGCCCAG
ATTGAGGTTCTGAGGAAGAAAGGACATTCTTACTCCGAGATTATCAATGAAAGCGTCATC
GAGTCTGTAGATTCTTTGAATCCGTTTATGCACGCTCGTGGAGTATCATTCATGGTTGAC
AATTGCTCAACAACAGCACGTCTAGGTTCCAGGAAGTGGGCCCCTCGATTTGATTACAAT
CTCACCCAACAAGCACTTGTAGCCGTGGATAACAACACGCCTATCAACCGTGATCTCATC
AGCAACTTCCTTGCAGATCCCGTGCATGGAGCTATTAAAGTGTGTGCTGAACTAAGACCC
ACAGTTGATATTTCTGTAACAGCAGATGCTGATTTTGTCCGCCCTGAGCTCAGGCAATCT
GTCAATTAA

Peptide Sequence

PEP ID

Solyc07g053280.3.1
PEP Infomation

Ketol-acid reductoisomerase (AHRD V3.3 *** K4CFM5_SOLLC)
Sequence

MAAAAATSFSITTSTPPSSSASSTKSLKPSLVGNLGFLSSSTPSLKPLRAQAAVSSSSSN
SGGGALAARMVAAPATVKAPASFDFETSVFKKEKVTLAGNDEYIVRGGRDLFKYLPDAFK
GIKQIGVIGWGSQGPAQAQNLRDSLAEIKSDIVVKIGLRKGSSSFAEARTAGFTEENGTL
GDIYETISGSDLVLLLISDAAQADNYEKVFSHMKPNSILGLSHGFLLGHLQSMGLDFPKN
ISVIAVCPKGMGPSVRRLYVQGKEVNGAGINSSFAVHQTHTFYYLQDIDGRATDVALGWS
VALGSPFTFATTLEQEYKSDIFGERGILLGAVHGVVESLFRRYTENGMNEELAYKNTVEC
ITGVISKTISTKGMLAVYDSLTEEGKKEFEAAYSASFYPCMEILYECYEDVATGSEIRSV
VLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRATRPAGDLGPLYPFTAGVFVALMMAQ
IEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYN
LTQQALVAVDNNTPINRDLISNFLADPVHGAIKVCAELRPTVDISVTADADFVRPELRQS
VN*

Transcript Sequence

Transcript ID

Solyc07g053280.3.1
Transcript Infomation

Ketol-acid reductoisomerase (AHRD V3.3 *** K4CFM5_SOLLC)
Sequence

CAAATCTGCAACATCTATAAAAAGGAACTCTCCATATCACATTTTCTCCCTCTTATCCCT
CTCTCTCTGTAACACTTCGATTTGTCTGCTTTCCACTTCACAATCATGGCGGCGGCGGCG
GCAACTTCCTTCTCCATCACCACCTCTACTCCTCCGTCCTCCTCCGCATCATCAACCAAA
TCCCTAAAACCTTCGCTTGTTGGTAACTTAGGGTTTCTATCCTCGTCAACTCCATCGCTT
AAGCCTCTCAGAGCTCAAGCCGCCGTTTCATCTAGCAGCTCAAACTCCGGCGGAGGCGCG
CTTGCGGCTCGCATGGTCGCTGCACCTGCTACCGTCAAAGCTCCTGCTTCGTTTGATTTT
GAAACGTCCGTTTTTAAGAAGGAGAAAGTAACCCTAGCTGGAAATGATGAGTACATTGTG
AGGGGAGGTAGAGATTTGTTCAAGTATTTGCCGGATGCTTTCAAAGGAATCAAGCAGATC
GGAGTTATCGGCTGGGGTTCTCAGGGACCTGCTCAAGCCCAGAACTTGAGGGATTCTCTT
GCAGAAATAAAATCTGACATAGTTGTTAAGATTGGTTTAAGAAAGGGTTCAAGCTCATTT
GCGGAGGCCCGCACAGCTGGGTTTACTGAAGAGAATGGAACCCTTGGTGACATATATGAG
ACTATCTCTGGCAGTGATCTAGTGCTGCTTTTGATTTCTGATGCTGCTCAGGCTGATAAT
TATGAGAAAGTGTTCTCTCACATGAAGCCAAACAGCATACTTGGGCTTTCACATGGATTC
CTCCTTGGCCATTTGCAGTCAATGGGCCTTGACTTCCCAAAGAACATTAGTGTGATTGCT
GTATGTCCCAAGGGAATGGGGCCTTCAGTCAGGAGATTATATGTTCAAGGAAAAGAAGTC
AATGGTGCTGGAATTAATTCAAGTTTTGCAGTTCACCAGACTCACACCTTTTACTATCTC
CAGGATATTGATGGAAGAGCCACAGATGTTGCTCTTGGGTGGTCTGTTGCCCTTGGTTCT
CCCTTTACTTTTGCTACTACTCTAGAGCAGGAATATAAAAGTGACATTTTTGGGGAACGA
GGCATTTTACTTGGTGCTGTCCATGGAGTTGTGGAGTCGCTTTTCAGAAGGTACACTGAG
AATGGAATGAATGAGGAGCTTGCATACAAGAACACTGTAGAATGCATAACAGGAGTCATT
TCAAAAACCATATCAACAAAGGGCATGTTGGCTGTGTATGACTCATTGACTGAGGAGGGC
AAGAAGGAGTTTGAAGCTGCATACAGTGCTTCATTCTACCCCTGCATGGAGATTTTGTAT
GAGTGCTATGAAGATGTAGCTACAGGTAGTGAGATCAGGAGCGTTGTCTTGGCTGGCCGC
CGCTTTTATGAAAAGGAGGGCTTACCTGCCTTCCCAATGGGGAAAATTGATCAAACAAGG
ATGTGGAAGGTTGGTGAGCGCGTCCGAGCAACCCGACCAGCTGGTGATCTTGGTCCTCTG
TATCCATTCACCGCTGGTGTCTTTGTGGCATTGATGATGGCCCAGATTGAGGTTCTGAGG
AAGAAAGGACATTCTTACTCCGAGATTATCAATGAAAGCGTCATCGAGTCTGTAGATTCT
TTGAATCCGTTTATGCACGCTCGTGGAGTATCATTCATGGTTGACAATTGCTCAACAACA
GCACGTCTAGGTTCCAGGAAGTGGGCCCCTCGATTTGATTACAATCTCACCCAACAAGCA
CTTGTAGCCGTGGATAACAACACGCCTATCAACCGTGATCTCATCAGCAACTTCCTTGCA
GATCCCGTGCATGGAGCTATTAAAGTGTGTGCTGAACTAAGACCCACAGTTGATATTTCT
GTAACAGCAGATGCTGATTTTGTCCGCCCTGAGCTCAGGCAATCTGTCAATTAAGGGCTT
TACGGGTCACTTTGTGAGCGAGCAAGTGAGAATTAGTGATGTTGAGATTTCATATTGTTG
ATGTGTGTTGGTGAAGGCAAGAATACTTAAATCTGTTAGCTTATAAGAATCTTAGCCGCT
TTTCGTTGTTTAGTTACGTTGGTACTAGCACTTTTTTATGTAACGAATAACAGATTCAAA
ATTTGGGAACCCTTGTAGCAACTATAAAATGTGGGTTATGGCAGTAGCATGTTTCAGTCT
CTACGTGAGTCTAATTTTAACAGTTTCAGTGCAGTTTCTTTCTGCCTGTTTTCATCCAAC
GTATGAACGAGAGCAACAACTTGTAAGTTTTATACCCTAAATAAATGGAAGAAGTTTGTG
CAAAATACTAACTTTACAAGTATGAGAATTTAATTCTATTAATGATGAAATGTGATGCAA
AATATCAATGTTAAAGTTTATAGTTATCAAAAGGAGTGATGCAACTTCATATATAGATAT
AAAAAAACAAGTAAAAAAGATTAAATGCGCAATAATCGGAATAAAAAGAGTATGAACTTC
ATATCCTATGTAATATAATGAAAATGCAACGTAATACTAGTAGTTATGACCAAAAATTGG
AAAAAAAAAAAGAAGAAGAGAAATTCATAAGTGTTT