Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053100.3.1
CDS Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** U5FEZ9_POPTR)
Sequence

ATGAATTCTATATATAGAGAGAAGGAAGAACAGGAGGTGTCGTATAGTTTGGGAAAAACA
ATGGAGTTTGATAGTTTCTTACCTCTTTTACTGTTAGTTTTCTCATGTTGTTGCTTACCT
GTTCTTCCTTGTCAAAATTGTGTGGAAGTTGGCAAATCAATCACTGGTAATCAGAAATTG
ATTTCATCTGATAGAAGTTTCGCCTTAGGATTTTTCATTCCATCAAATTCAATGTACACC
TATCTTGGCATATGGTACAACATAATCCCTCAACAAACAGTTGTTTGGGTAGCCAACAGA
GAATCTCCAATCCCATCAAATGCTTCACCAGTTTTCACTGTCGGCGGTGATGGAAATTTA
GTGATTTTCGATGAAAAAGGTGAACTCATTTGGTCATCGAATGTCTCATCAACATCACGG
GAACCATTATTAACTTCAAATTCTACTATCGGAATATTGTTGGATACCGGGAATCTTGTT
CTCCGATACTACGGTGAGTCCAATTATTTGTGGCAGAGCTTCCAGCATCCTACAGATACG
TTATTACGCCATATGAGATTTGGTTTCAATAAAATTAGTGGCTTACGAAATGTGATCACT
TCATGGACGAGTAATGAAGATCCTCAGCCTGGAAATTTCTCTTTTGGAATAGATCGGGTT
ATGCGTTTTGTTATTTGGAACCAAAATGATATTTATTATAGATTTGACGATGGTTGCAGA
GCGTATATACTAGCAACAGTGTGGTGTTTCACTGTTGTTACTGAAAATGATAATGTATAT
CTTAATTTAGCTTACTACAGAATCTTTCTGAGATTAAGAGTCGTGCTGAACCCGAGCGGG
CAGCTTCAGGTGATGGTGTGGAATAAGAATAAAAGTAACAAATGGAATGTTGAATTTGAA
GCACCACGATCTAAGTGTGAACTTTACGCGCATTGTGGTCCGTTTGGTACTTGTGGGATC
AGATCAAAAGGATTATGCAGTTGTTTAGACGGATTTGAACCTAAGTTTTCGACAGATTGG
GCAAATGAGATATGGAATGGAGGTTGTGTGAGAAAAATAGCGTTGGGATGTGATGGTGGA
GATGGATTTTTTAAGCATGAGAACATGAAGTTGCCAGATTATGCCGTCTCTTTAGGAAAT
ATGAGCACTGAAGAGTGTGAAACTCAGTGCATTAGGAACTGCTCTTGTTCAGCTTATGCT
TGTACGAGAAACGCCTGTTTTATATGGCATGGCGATTTACTGGATATTGGGCATGACATT
ACTAACGGCAGAACTCTCTATGTTCGAGTTCACAACTCAGAGCAAGTTACTAATGCTCAA
TCTAGAAATTCAGCTCGAAGATACAAAATTCTCATTGCAAAAATTGTTTCCGCAAGTTTT
GCAATCTTGCTTCTTATTAGTATCTCTGCTTTTATCTTCAAAAGAAAGCGCTTGAGAAGA
CGAGGTGAATCTAGCATTTCTAAACTGGACGGAGATTCTGCTCTAGTTAGCTCCATGCCT
AGTGGATCTTTAGTTGGCAAAGATGATATGAAGTTGGTACAGTACAGCCTGCAGAATATA
AGAGATGCAACAAACAACTTCCATGAAGAAAACAAACTCGGAGAAGGTGGTTTTGGCCCC
GTGTTTAAGGGGTCTTTGCCTGAATTCGGAGATGTAGCCATCAAAAGGCTAAGCAGGAAG
TCATCACAAGGACTAGAGGAGTTCATGAATGAATTGAAGCTAATCGCAAACTTGCAGCAC
AAAAATCTAGTCAGCCTCTTAGGATGTTGCGTTGAAGGGGAGGAGAAGATACTGATCTAT
GAATATATGCCCAATTGCAGCCTGGACAAATTTCTTTCTGACCCTTCATTGAAGGTTACA
CTCGGTTGGGATACACGTTTTGGGATAATAGAAGGAATTGCTCAAGGAATGCTTTACCTG
CATAAGTACTCGAGATTAAAAGTCATTCACAGGGACTTGAAAGTAAGCAACATTTTGCTA
GATCAAGAGATGATCCCAAAAATATCAGACTTTGGAATGGCAAGGATTTTCGGGACTGAT
CAAACACAGGCCAGTACAAAACGAGTGGTTGGTACATATGGCTACATGTCTCCAGAATAC
GTAGTATATGGCCAATTCTCGGAGAAATCAGATGTATTCAGCTTTGGAGTATTGTTGTTG
GAAATCTTGACTGGTGAACGAAACTCAGACTTCTTCACAACTGAAGTTTGTGTATCTCTA
TTAGGATGGGCATGGAAAATGTGGAAAGAAGGAAGAATGTTGGAGTTGATTGATCCATCA
ATAAGGGCAATCTGCGACAGTAACAAAGCAGCACGGTCTGTTCTGGTTTCTCTTCTTTGC
GTTCAAGAAGTTCCTACTGATCGACCAACAATGTCTGATATAGTTGTCATGTTAAGCAAC
GAAACAACACCCATCCCTGAGCCAAAAGAACCGGCTTTCCGCAGCAGCTGGCGACATCAA
ACGTCAAGCGATTTCTCCATAAATGAGTTGACATTAACTTTGCCAGTACCTAGATGA

Peptide Sequence

PEP ID

Solyc07g053100.3.1
PEP Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** U5FEZ9_POPTR)
Sequence

MNSIYREKEEQEVSYSLGKTMEFDSFLPLLLLVFSCCCLPVLPCQNCVEVGKSITGNQKL
ISSDRSFALGFFIPSNSMYTYLGIWYNIIPQQTVVWVANRESPIPSNASPVFTVGGDGNL
VIFDEKGELIWSSNVSSTSREPLLTSNSTIGILLDTGNLVLRYYGESNYLWQSFQHPTDT
LLRHMRFGFNKISGLRNVITSWTSNEDPQPGNFSFGIDRVMRFVIWNQNDIYYRFDDGCR
AYILATVWCFTVVTENDNVYLNLAYYRIFLRLRVVLNPSGQLQVMVWNKNKSNKWNVEFE
APRSKCELYAHCGPFGTCGIRSKGLCSCLDGFEPKFSTDWANEIWNGGCVRKIALGCDGG
DGFFKHENMKLPDYAVSLGNMSTEECETQCIRNCSCSAYACTRNACFIWHGDLLDIGHDI
TNGRTLYVRVHNSEQVTNAQSRNSARRYKILIAKIVSASFAILLLISISAFIFKRKRLRR
RGESSISKLDGDSALVSSMPSGSLVGKDDMKLVQYSLQNIRDATNNFHEENKLGEGGFGP
VFKGSLPEFGDVAIKRLSRKSSQGLEEFMNELKLIANLQHKNLVSLLGCCVEGEEKILIY
EYMPNCSLDKFLSDPSLKVTLGWDTRFGIIEGIAQGMLYLHKYSRLKVIHRDLKVSNILL
DQEMIPKISDFGMARIFGTDQTQASTKRVVGTYGYMSPEYVVYGQFSEKSDVFSFGVLLL
EILTGERNSDFFTTEVCVSLLGWAWKMWKEGRMLELIDPSIRAICDSNKAARSVLVSLLC
VQEVPTDRPTMSDIVVMLSNETTPIPEPKEPAFRSSWRHQTSSDFSINELTLTLPVPR*

Transcript Sequence

Transcript ID

Solyc07g053100.3.1
Transcript Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** U5FEZ9_POPTR)
Sequence

ATAGTATTTGAAAATGAAGTTAAAACAACTTTTAAGTTTTAAACTAAAGATAAAATCTTG
CTTAGAAAAGGAAAGAGACACTCCAAATGAAACAAATTAAATATAAAGTTACGACAAAAC
GAATTGAAACGTGAATTATGAATTCTATATATAGAGAGAAGGAAGAACAGGAGGTGTCGT
ATAGTTTGGGAAAAACAATGGAGTTTGATAGTTTCTTACCTCTTTTACTGTTAGTTTTCT
CATGTTGTTGCTTACCTGTTCTTCCTTGTCAAAATTGTGTGGAAGTTGGCAAATCAATCA
CTGGTAATCAGAAATTGATTTCATCTGATAGAAGTTTCGCCTTAGGATTTTTCATTCCAT
CAAATTCAATGTACACCTATCTTGGCATATGGTACAACATAATCCCTCAACAAACAGTTG
TTTGGGTAGCCAACAGAGAATCTCCAATCCCATCAAATGCTTCACCAGTTTTCACTGTCG
GCGGTGATGGAAATTTAGTGATTTTCGATGAAAAAGGTGAACTCATTTGGTCATCGAATG
TCTCATCAACATCACGGGAACCATTATTAACTTCAAATTCTACTATCGGAATATTGTTGG
ATACCGGGAATCTTGTTCTCCGATACTACGGTGAGTCCAATTATTTGTGGCAGAGCTTCC
AGCATCCTACAGATACGTTATTACGCCATATGAGATTTGGTTTCAATAAAATTAGTGGCT
TACGAAATGTGATCACTTCATGGACGAGTAATGAAGATCCTCAGCCTGGAAATTTCTCTT
TTGGAATAGATCGGGTTATGCGTTTTGTTATTTGGAACCAAAATGATATTTATTATAGAT
TTGACGATGGTTGCAGAGCGTATATACTAGCAACAGTGTGGTGTTTCACTGTTGTTACTG
AAAATGATAATGTATATCTTAATTTAGCTTACTACAGAATCTTTCTGAGATTAAGAGTCG
TGCTGAACCCGAGCGGGCAGCTTCAGGTGATGGTGTGGAATAAGAATAAAAGTAACAAAT
GGAATGTTGAATTTGAAGCACCACGATCTAAGTGTGAACTTTACGCGCATTGTGGTCCGT
TTGGTACTTGTGGGATCAGATCAAAAGGATTATGCAGTTGTTTAGACGGATTTGAACCTA
AGTTTTCGACAGATTGGGCAAATGAGATATGGAATGGAGGTTGTGTGAGAAAAATAGCGT
TGGGATGTGATGGTGGAGATGGATTTTTTAAGCATGAGAACATGAAGTTGCCAGATTATG
CCGTCTCTTTAGGAAATATGAGCACTGAAGAGTGTGAAACTCAGTGCATTAGGAACTGCT
CTTGTTCAGCTTATGCTTGTACGAGAAACGCCTGTTTTATATGGCATGGCGATTTACTGG
ATATTGGGCATGACATTACTAACGGCAGAACTCTCTATGTTCGAGTTCACAACTCAGAGC
AAGTTACTAATGCTCAATCTAGAAATTCAGCTCGAAGATACAAAATTCTCATTGCAAAAA
TTGTTTCCGCAAGTTTTGCAATCTTGCTTCTTATTAGTATCTCTGCTTTTATCTTCAAAA
GAAAGCGCTTGAGAAGACGAGGTGAATCTAGCATTTCTAAACTGGACGGAGATTCTGCTC
TAGTTAGCTCCATGCCTAGTGGATCTTTAGTTGGCAAAGATGATATGAAGTTGGTACAGT
ACAGCCTGCAGAATATAAGAGATGCAACAAACAACTTCCATGAAGAAAACAAACTCGGAG
AAGGTGGTTTTGGCCCCGTGTTTAAGGGGTCTTTGCCTGAATTCGGAGATGTAGCCATCA
AAAGGCTAAGCAGGAAGTCATCACAAGGACTAGAGGAGTTCATGAATGAATTGAAGCTAA
TCGCAAACTTGCAGCACAAAAATCTAGTCAGCCTCTTAGGATGTTGCGTTGAAGGGGAGG
AGAAGATACTGATCTATGAATATATGCCCAATTGCAGCCTGGACAAATTTCTTTCTGACC
CTTCATTGAAGGTTACACTCGGTTGGGATACACGTTTTGGGATAATAGAAGGAATTGCTC
AAGGAATGCTTTACCTGCATAAGTACTCGAGATTAAAAGTCATTCACAGGGACTTGAAAG
TAAGCAACATTTTGCTAGATCAAGAGATGATCCCAAAAATATCAGACTTTGGAATGGCAA
GGATTTTCGGGACTGATCAAACACAGGCCAGTACAAAACGAGTGGTTGGTACATATGGCT
ACATGTCTCCAGAATACGTAGTATATGGCCAATTCTCGGAGAAATCAGATGTATTCAGCT
TTGGAGTATTGTTGTTGGAAATCTTGACTGGTGAACGAAACTCAGACTTCTTCACAACTG
AAGTTTGTGTATCTCTATTAGGATGGGCATGGAAAATGTGGAAAGAAGGAAGAATGTTGG
AGTTGATTGATCCATCAATAAGGGCAATCTGCGACAGTAACAAAGCAGCACGGTCTGTTC
TGGTTTCTCTTCTTTGCGTTCAAGAAGTTCCTACTGATCGACCAACAATGTCTGATATAG
TTGTCATGTTAAGCAACGAAACAACACCCATCCCTGAGCCAAAAGAACCGGCTTTCCGCA
GCAGCTGGCGACATCAAACGTCAAGCGATTTCTCCATAAATGAGTTGACATTAACTTTGC
CAGTACCTAGATGAGAGGATTTAGCTTTCTATTTCTCTTATGGAATTAATATTATTTTGT
AAAGAACCATCTTCTCAAAAATGTTTAGCACTGTAAATAAAAAAGAATCAAAAACCAATT
CAGTTACTCCTTTCTGTCCCAATTTATA