Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g053040.2.1
CDS Infomation

F-box family protein (AHRD V3.3 *** B9I6J7_POPTR)
Sequence

ATGAAGAACAAAAAGATCATTCTAATGGAAACAAGATCCGTTAAGAAAAAAAGGCTTCTT
CATGAAATTTACGCGAGTTTTTCATGTGGTGAAGACCGCATCAGTGATCTCCCTGACGCG
GTCATTCACCACATTCTTTTCTTCCTTCCAATCAAATCCATCGCCAAACTTAGCGTACTT
TCTAAGCGATGGAGGCACATATGGCACACATTCCCAGATCTCGATTTTACAACAATCAAT
GTCCCATCAACATCATCTTCATCAGGTTATTATAACTTAACCTCAAAAGTCAGCTCATAC
GTCCGTAACAATTACAAAAAATTCCACGCAAATTGTACTAGTTCCGGAGGTGCTGATTTC
ATAGATCAAGTGTTATCTTTTCGCGAAAAAAATTCAGGGATCAGAGTACTCCGATTTCAT
GCAAATTTGAGTTTTTCACGTCTAAACGCCTTGATACGTGGCGCTGTTAAGCACAATGTC
CAGGAACTTGACGTTGAAGTAGCCACTAATGATTATTTCAATTTTCCAAGAAGTGCTATA
ACTAGTGAATCTTTAAGAGTTTTTAATTTAAAGTCAAAATATCCAGGATTTAGGTTACCA
CCTTCATCAATTATGAAAAATGGGTTCAAAAATTTATTTTCATTGTCACTATCGTGTCTA
ATTATGTACGAACAACCTTCGTTACGTGATTTATTCACGGAGACATCTTTCCCGTTGCTT
AAAAAATTGAGTCTTGATGGTTGTACGGGGCTAACTTACTTACATGTAAGTTGTCGTGTA
CTCGCGAATTTAAATCTTGAAAATTGTTTTCAATTGGAGAATTTAGATATAATGTGTCCA
AAATTGGAGAAATTGAGTGTTAAGAGTTGTTTTGATTCGTATACTAGTGGTACTGAGGTT
AAGATTGTTGGTCCAAGGCTAAAAAGTATTGTTTGGTCGAATAATACTATAACGGACCAA
AGTTGTTTGGAGGATTTGACTTGTCTGATTGAGGCTTTTGTTGGGTTTTTTGTTCTTCTT
GAGGATATTGGTACAATGAAGCTTCGAAGTGTCAATGATTTCTTGTCTGGCCTCTCTCAT
TCACATTCATTAGTTCTTGAAAATCCAAGTGTTGAGATTCTATCGAAGAATAATCACTTG
GCAGGAATATCATTACGTCCTTTTAGTGAACTAAAATCGTTAGAGTTGCACACAGGATTC
CACAAACACAACATTCCAGGATTAGCAAATCTCTTTAGGAGTTCTCCAGCTACTAATACA
CTCATTCTCAACATTACCAATGAACACAACATTCAAAGAAGGAAATGGAATAGGGACCTA
TGGCAATTGTCAAACTCAGGTGAAGAAAGATTTTGGGAGTCACAAAGTAATGCTATGAAT
TCTTTCCTTCAACATCTAAAAGTAGTGAAGATACATGGATTTTCAGAGTGTGAAAGTGAT
GTTAGTTTAGTGAAGTTTTTGTTGAAGCATGGAAAAGTGTTGCAAGAAATGTTCTTGTGT
GTAGCTGAGCTTTCCAAATCAAGAGACTCACTTCATAGAGAAAAAATCAAATCACAAATA
ATGGGGTTTTCTAAAGCATCTTGTAATGCTAAGATTGTGTTCAAGTAA

Peptide Sequence

PEP ID

Solyc07g053040.2.1
PEP Infomation

F-box family protein (AHRD V3.3 *** B9I6J7_POPTR)
Sequence

MKNKKIILMETRSVKKKRLLHEIYASFSCGEDRISDLPDAVIHHILFFLPIKSIAKLSVL
SKRWRHIWHTFPDLDFTTINVPSTSSSSGYYNLTSKVSSYVRNNYKKFHANCTSSGGADF
IDQVLSFREKNSGIRVLRFHANLSFSRLNALIRGAVKHNVQELDVEVATNDYFNFPRSAI
TSESLRVFNLKSKYPGFRLPPSSIMKNGFKNLFSLSLSCLIMYEQPSLRDLFTETSFPLL
KKLSLDGCTGLTYLHVSCRVLANLNLENCFQLENLDIMCPKLEKLSVKSCFDSYTSGTEV
KIVGPRLKSIVWSNNTITDQSCLEDLTCLIEAFVGFFVLLEDIGTMKLRSVNDFLSGLSH
SHSLVLENPSVEILSKNNHLAGISLRPFSELKSLELHTGFHKHNIPGLANLFRSSPATNT
LILNITNEHNIQRRKWNRDLWQLSNSGEERFWESQSNAMNSFLQHLKVVKIHGFSECESD
VSLVKFLLKHGKVLQEMFLCVAELSKSRDSLHREKIKSQIMGFSKASCNAKIVFK*

Transcript Sequence

Transcript ID

Solyc07g053040.2.1
Transcript Infomation

F-box family protein (AHRD V3.3 *** B9I6J7_POPTR)
Sequence

ATGAAGAACAAAAAGATCATTCTAATGGAAACAAGATCCGTTAAGAAAAAAAGGCTTCTT
CATGAAATTTACGCGAGTTTTTCATGTGGTGAAGACCGCATCAGTGATCTCCCTGACGCG
GTCATTCACCACATTCTTTTCTTCCTTCCAATCAAATCCATCGCCAAACTTAGCGTACTT
TCTAAGCGATGGAGGCACATATGGCACACATTCCCAGATCTCGATTTTACAACAATCAAT
GTCCCATCAACATCATCTTCATCAGGTTATTATAACTTAACCTCAAAAGTCAGCTCATAC
GTCCGTAACAATTACAAAAAATTCCACGCAAATTGTACTAGTTCCGGAGGTGCTGATTTC
ATAGATCAAGTGTTATCTTTTCGCGAAAAAAATTCAGGGATCAGAGTACTCCGATTTCAT
GCAAATTTGAGTTTTTCACGTCTAAACGCCTTGATACGTGGCGCTGTTAAGCACAATGTC
CAGGAACTTGACGTTGAAGTAGCCACTAATGATTATTTCAATTTTCCAAGAAGTGCTATA
ACTAGTGAATCTTTAAGAGTTTTTAATTTAAAGTCAAAATATCCAGGATTTAGGTTACCA
CCTTCATCAATTATGAAAAATGGGTTCAAAAATTTATTTTCATTGTCACTATCGTGTCTA
ATTATGTACGAACAACCTTCGTTACGTGATTTATTCACGGAGACATCTTTCCCGTTGCTT
AAAAAATTGAGTCTTGATGGTTGTACGGGGCTAACTTACTTACATGTAAGTTGTCGTGTA
CTCGCGAATTTAAATCTTGAAAATTGTTTTCAATTGGAGAATTTAGATATAATGTGTCCA
AAATTGGAGAAATTGAGTGTTAAGAGTTGTTTTGATTCGTATACTAGTGGTACTGAGGTT
AAGATTGTTGGTCCAAGGCTAAAAAGTATTGTTTGGTCGAATAATACTATAACGGACCAA
AGTTGTTTGGAGGATTTGACTTGTCTGATTGAGGCTTTTGTTGGGTTTTTTGTTCTTCTT
GAGGATATTGGTACAATGAAGCTTCGAAGTGTCAATGATTTCTTGTCTGGCCTCTCTCAT
TCACATTCATTAGTTCTTGAAAATCCAAGTGTTGAGATTCTATCGAAGAATAATCACTTG
GCAGGAATATCATTACGTCCTTTTAGTGAACTAAAATCGTTAGAGTTGCACACAGGATTC
CACAAACACAACATTCCAGGATTAGCAAATCTCTTTAGGAGTTCTCCAGCTACTAATACA
CTCATTCTCAACATTACCAATGAACACAACATTCAAAGAAGGAAATGGAATAGGGACCTA
TGGCAATTGTCAAACTCAGGTGAAGAAAGATTTTGGGAGTCACAAAGTAATGCTATGAAT
TCTTTCCTTCAACATCTAAAAGTAGTGAAGATACATGGATTTTCAGAGTGTGAAAGTGAT
GTTAGTTTAGTGAAGTTTTTGTTGAAGCATGGAAAAGTGTTGCAAGAAATGTTCTTGTGT
GTAGCTGAGCTTTCCAAATCAAGAGACTCACTTCATAGAGAAAAAATCAAATCACAAATA
ATGGGGTTTTCTAAAGCATCTTGTAATGCTAAGATTGTGTTCAAGTAAACTTAGAGCTAT
GTATAACTTCCAAGATTTAAACAAAGGGTAGTTCTTTCATTTTATTTTTGAATTATATCA
AAATTTATAGACTTATGGTTGGACATTTGGAATTTCATGGTCATGGCTTAATTGACTTAA
TATACATTATTATCTCAATTAATGTAAAGTATGTATCTTCTTTAAAAAAAAAATTTGCTC
GAGTTTTTACATGTGGCATACTTTATTGGCCCGTGGTTAGGCATGAATAAGGTATGTATT
AAACACAATTAGGATAAAGTTTGGTATAAATATGTAAAAAGGAATTTGTCTACAAGCTGA
GGAGATCAACTGTATTAAGCCTAACTTAATTAGTC