Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g052570.3.1
CDS Infomation

histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *** AT3G21820.1)
Sequence

ATGGAAATAATTTGCCCAATTGATGCACAATACTCAGACCAGATTGCCGCACTTCTCAAG
CCGCCACCTCCACTAGAAAAGTATTTTGAAGAGCTTTTAGCCACTAGACAATGCGATGGC
ATCAAAGTTAAACCTACTCCACGTTATGGAAAAGGGGTTTATGCTGAGACGGATTTCAAA
GAAGAGGACCTTGTCTTGAAGGATCAAATGCTTGCTGGTGCCCAACATCCTTCAAATAAG
GTAGACTGCTTGGTATGTAGTTATTGTTTCTGCTTTGTTGGGTCTATAGAGCTTCAAATT
GGGAGGAAGCTATATTTAGAACAGCTGGGAGTCTCCCCTATCGATGAGTGTCATATGCAA
AAAGATTGTTATAACTCTGATTCATCTGTTGGTGAAGATGATTCTGATGTAGAAGATCAG
CAGGTCTCTGGAGAATGTGCTTCTAGCCCTTCAAAAGATAAAATTTCTCTCCCTAAGGAT
GTGGTCGAGTCATTGTTTAATGGCGAGATGCGACTACCATATTCTGAGAAATTCTCAATG
CCTCCAATTGTTTCTTGTCCAGGTGGATGTAAAGAGAACTACTATTGCAGCAAATCTTGT
GCAGAGGCTGATTGGGAGTCTTTTCATTCTTTGCTGTGCACGGGGGAGGGGTCAAAGTCA
TTAAGCACAAAGGCGCTTCAGAAATTTATAGAACATGCTAATGATACAAATGACATTTTC
CTTCTTGCAGCAAAGGTTATTTCTTTCACCATTTTGAGACATAAGAATTTGAAAGAAAGT
CGTCATGAGGGAAAAGGGAAGCAGGTTATTTCAGAAAGTATTGATTTTTCTTTACTGGGG
GAGGCATGGAAGCCCGTGTCCATGGGCTACAAACGAAGGTGGTGGGATTGCATTGCTTTA
CCAGCTGATGTTGATGGTTCTGATGAAGCTTCATTCCGAATGCAAATAAAGGAGCTGGCA
TTAACGTCTCTGCAGCTTCTCAAGGAGGCTATCTTTGATGAGGAATGCCAGCCATTATTC
TCGCTTGAAATATATGGCAATATCATTGGCATGTTTGAGCTGAATAACCTTGATTTGGTG
GTAGAGTCACCAGTGGAGGATTACTTTCTGTATATTGATGATCTTCCTCTCTCTGAAAAG
GGAGAGGTTGAGCAAACTACAAAGCCTATCCTAGATGCTCTTGGTGATGACTATTCAATT
TGTTGTCAAGGTACTGCGTTTTTCCCCTTGCAAAGCTGTATGAACCATTCCTGCAGACCT
AATGCAAAAGCTTTTAAGCGAGAAGAGGATCGAGATGGCCAAGCAACCATAATTGCTCTT
CAACCCATTGCCAAAGGAGAAGAGATAACTATTTCATATATCGACGAGGACCTTCCTTTT
GAAGAGAGACAGGCATTACTCGCAGACTATGGTTTCAGATGTGGATGCTCCAAATGTCTA
GAGGAAACTTAG

Peptide Sequence

PEP ID

Solyc07g052570.3.1
PEP Infomation

histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *** AT3G21820.1)
Sequence

MEIICPIDAQYSDQIAALLKPPPPLEKYFEELLATRQCDGIKVKPTPRYGKGVYAETDFK
EEDLVLKDQMLAGAQHPSNKVDCLVCSYCFCFVGSIELQIGRKLYLEQLGVSPIDECHMQ
KDCYNSDSSVGEDDSDVEDQQVSGECASSPSKDKISLPKDVVESLFNGEMRLPYSEKFSM
PPIVSCPGGCKENYYCSKSCAEADWESFHSLLCTGEGSKSLSTKALQKFIEHANDTNDIF
LLAAKVISFTILRHKNLKESRHEGKGKQVISESIDFSLLGEAWKPVSMGYKRRWWDCIAL
PADVDGSDEASFRMQIKELALTSLQLLKEAIFDEECQPLFSLEIYGNIIGMFELNNLDLV
VESPVEDYFLYIDDLPLSEKGEVEQTTKPILDALGDDYSICCQGTAFFPLQSCMNHSCRP
NAKAFKREEDRDGQATIIALQPIAKGEEITISYIDEDLPFEERQALLADYGFRCGCSKCL
EET*

Transcript Sequence

Transcript ID

Solyc07g052570.3.1
Transcript Infomation

histone-lysine N-methyltransferase ATXR2 (AHRD V3.3 *** AT3G21820.1)
Sequence

ATGGAAATAATTTGCCCAATTGATGCACAATACTCAGACCAGATTGCCGCACTTCTCAAG
CCGCCACCTCCACTAGAAAAGTATTTTGAAGAGCTTTTAGCCACTAGACAATGCGATGGC
ATCAAAGTTAAACCTACTCCACGTTATGGAAAAGGGGTTTATGCTGAGACGGATTTCAAA
GAAGAGGACCTTGTCTTGAAGGATCAAATGCTTGCTGGTGCCCAACATCCTTCAAATAAG
GTAGACTGCTTGGTATGTAGTTATTGTTTCTGCTTTGTTGGGTCTATAGAGCTTCAAATT
GGGAGGAAGCTATATTTAGAACAGCTGGGAGTCTCCCCTATCGATGAGTGTCATATGCAA
AAAGATTGTTATAACTCTGATTCATCTGTTGGTGAAGATGATTCTGATGTAGAAGATCAG
CAGGTCTCTGGAGAATGTGCTTCTAGCCCTTCAAAAGATAAAATTTCTCTCCCTAAGGAT
GTGGTCGAGTCATTGTTTAATGGCGAGATGCGACTACCATATTCTGAGAAATTCTCAATG
CCTCCAATTGTTTCTTGTCCAGGTGGATGTAAAGAGAACTACTATTGCAGCAAATCTTGT
GCAGAGGCTGATTGGGAGTCTTTTCATTCTTTGCTGTGCACGGGGGAGGGGTCAAAGTCA
TTAAGCACAAAGGCGCTTCAGAAATTTATAGAACATGCTAATGATACAAATGACATTTTC
CTTCTTGCAGCAAAGGTTATTTCTTTCACCATTTTGAGACATAAGAATTTGAAAGAAAGT
CGTCATGAGGGAAAAGGGAAGCAGGTTATTTCAGAAAGTATTGATTTTTCTTTACTGGGG
GAGGCATGGAAGCCCGTGTCCATGGGCTACAAACGAAGGTGGTGGGATTGCATTGCTTTA
CCAGCTGATGTTGATGGTTCTGATGAAGCTTCATTCCGAATGCAAATAAAGGAGCTGGCA
TTAACGTCTCTGCAGCTTCTCAAGGAGGCTATCTTTGATGAGGAATGCCAGCCATTATTC
TCGCTTGAAATATATGGCAATATCATTGGCATGTTTGAGCTGAATAACCTTGATTTGGTG
GTAGAGTCACCAGTGGAGGATTACTTTCTGTATATTGATGATCTTCCTCTCTCTGAAAAG
GGAGAGGTTGAGCAAACTACAAAGCCTATCCTAGATGCTCTTGGTGATGACTATTCAATT
TGTTGTCAAGGTACTGCGTTTTTCCCCTTGCAAAGCTGTATGAACCATTCCTGCAGACCT
AATGCAAAAGCTTTTAAGCGAGAAGAGGATCGAGATGGCCAAGCAACCATAATTGCTCTT
CAACCCATTGCCAAAGGAGAAGAGATAACTATTTCATATATCGACGAGGACCTTCCTTTT
GAAGAGAGACAGGCATTACTCGCAGACTATGGTTTCAGATGTGGATGCTCCAAATGTCTA
GAGGAAACTTAGTTAAAGATCAAAGGCAACTTCTTGAAAATGACCACAATTTTGGAACAT
GTAACTGATGTACAATATGGATTTAGA