Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g052480.3.1
CDS Infomation

isocitrate lyase LEU18678
Sequence

ATGGCTGCATCTTACTCAGTTCCTTCAATGATTATGGAAGAAGAGAGGAGATTTGAAGCA
GAGGTAGCAGAGGTGCAAGCATGGTGGAACACAGAGAGGTTCAGGCTAACAAAGAGGGCA
TATTCAGCTAGGGATGTGGTGGCACTAAGAGGAACTATGAGGCAAAGTTATGCATCCAAT
GAGTTGGCTCAGAAGCTATGGAGGACACTCAAGACTCATCAAGCTAATGGGACAGCTTCA
AGGACTTTTGGTGCACTTGACCCTGTTCAAGTTACTATGATGGCTAAGCATTTGGATACT
ATTTATGTATCTGGCTGGCAGTGTTCTTCAACTCACACAAGTACTAATGAACCAGGGCCT
GATCTTGCTGATTACCCTTATGATACTGTTCCGAACAAAGTGGAACATTTGTTTTTTGCT
CAGCAGTATCATGATAGGAAGCAGAGAGAAGCAAGAATGAGCATGAGCAGAGAGGAGAGG
GCAAGAACCCCTTTCATTGATTACTTGAAACCTATCATTGCTGATGGTGACACTGGATTT
GGTGGTGCAACTGCTACTGTTAAGCTGTGTAAGCTTTTCGTGGAGCGCGGTGCTGCTGGT
GTCCACATTGAGGATCAGTCCTCTGTTACTAAGAAATGTGGTCATATGGCTGGTAAAGTT
CTTGTTGCTGTAAGTGAACATATTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTC
ATGGGGACTGAGACAGTCCTCGTGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAA
ACCAATGTGGATACAAGGGATCATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAG
GGCAAGGGTTTGGCTACTCTTTTGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAA
CTTCAAGCCATTGAGGATAACTGGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGT
GTCACTGATGCAATCAAGAAAATGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAAC
GAATGGATGAATCATTCGAGCTATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTA
GCTGAAAGACTTGGCCTTCCTAATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAA
GGGTTCTACAGGTTTCAGGGCTCAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCC
GAGTACTGTGATCTAGTCTGGATGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAA
TTTTCTCAAGGAGTTAAGACTCTAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCC
TCATTCAATTGGGATGCATCAGGGATGAATGATAACCAAATGATGGATTTCATTCCAAGA
ATAGCCAAATTAGGCTATTGCTGGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCA
CTCATCGTCGACACGTTTGCCAAGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAG
AAAATACAAAGAGAGGAGAGGAGCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCT
GGGGCTAATTACTATGATAGAGTTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCT
GCTATGGGAAAAGGTGTAACTGAGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCA
ACAAACTTAGGTGATGGAAGTGTGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAA
CAACAAACAAAAAAAAAAGTGATTTCTTTTGGAGTGTGA

Peptide Sequence

PEP ID

Solyc07g052480.3.1
PEP Infomation

isocitrate lyase LEU18678
Sequence

MAASYSVPSMIMEEERRFEAEVAEVQAWWNTERFRLTKRAYSARDVVALRGTMRQSYASN
ELAQKLWRTLKTHQANGTASRTFGALDPVQVTMMAKHLDTIYVSGWQCSSTHTSTNEPGP
DLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPFIDYLKPIIADGDTGF
GGATATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAVSEHINRLVAARLQFDV
MGTETVLVARTDAVAATLIQTNVDTRDHQFILGASNPNLKGKGLATLLSEAMAAGKTGPE
LQAIEDNWLGMAELKTFSQCVTDAIKKMNLAEYEKQRKLNEWMNHSSYEKCLSHEQAREV
AERLGLPNLFWDWDLPRTREGFYRFQGSVEAAIVRGWAFAEYCDLVWMETSSPDMVECTK
FSQGVKTLRPELMLAYNLSPSFNWDASGMNDNQMMDFIPRIAKLGYCWQFITLAGFHADA
LIVDTFAKDFARRGMLAYVEKIQREERSNGVDTLAHQKWSGANYYDRVLRTVQGGITSTA
AMGKGVTEEQFEEKWTRTGATNLGDGSVVIAKARM*ENQQQQTKKKVISFGV*

Transcript Sequence

Transcript ID

Solyc07g052480.3.1
Transcript Infomation

isocitrate lyase LEU18678
Sequence

AAATTGAGCCTCTTTGCCTCGACCATTTGCATACACAATTCATCATTTGCAATTGTATAG
GTACTACACAAAATAAAAAAAGATTAAAAGTTCTAGCCATGGCTGCATCTTACTCAGTTC
CTTCAATGATTATGGAAGAAGAGAGGAGATTTGAAGCAGAGGTAGCAGAGGTGCAAGCAT
GGTGGAACACAGAGAGGTTCAGGCTAACAAAGAGGGCATATTCAGCTAGGGATGTGGTGG
CACTAAGAGGAACTATGAGGCAAAGTTATGCATCCAATGAGTTGGCTCAGAAGCTATGGA
GGACACTCAAGACTCATCAAGCTAATGGGACAGCTTCAAGGACTTTTGGTGCACTTGACC
CTGTTCAAGTTACTATGATGGCTAAGCATTTGGATACTATTTATGTATCTGGCTGGCAGT
GTTCTTCAACTCACACAAGTACTAATGAACCAGGGCCTGATCTTGCTGATTACCCTTATG
ATACTGTTCCGAACAAAGTGGAACATTTGTTTTTTGCTCAGCAGTATCATGATAGGAAGC
AGAGAGAAGCAAGAATGAGCATGAGCAGAGAGGAGAGGGCAAGAACCCCTTTCATTGATT
ACTTGAAACCTATCATTGCTGATGGTGACACTGGATTTGGTGGTGCAACTGCTACTGTTA
AGCTGTGTAAGCTTTTCGTGGAGCGCGGTGCTGCTGGTGTCCACATTGAGGATCAGTCCT
CTGTTACTAAGAAATGTGGTCATATGGCTGGTAAAGTTCTTGTTGCTGTAAGTGAACATA
TTAACAGGCTTGTGGCTGCAAGGTTGCAGTTTGATGTCATGGGGACTGAGACAGTCCTCG
TGGCTCGTACTGATGCGGTTGCAGCCACATTGATCCAAACCAATGTGGATACAAGGGATC
ATCAGTTCATTTTGGGTGCTTCCAACCCGAATCTCAAGGGCAAGGGTTTGGCTACTCTTT
TGTCTGAAGCTATGGCTGCAGGCAAAACAGGGCCGGAACTTCAAGCCATTGAGGATAACT
GGCTTGGAATGGCTGAACTCAAGACATTTTCTCAATGTGTCACTGATGCAATCAAGAAAA
TGAACCTCGCGGAGTATGAGAAGCAGAGGAAGTTGAACGAATGGATGAATCATTCGAGCT
ATGAGAAATGTCTTTCGCACGAACAAGCTAGGGAGGTAGCTGAAAGACTTGGCCTTCCTA
ATCTCTTTTGGGACTGGGACTTGCCTAGAACCAGAGAAGGGTTCTACAGGTTTCAGGGCT
CAGTAGAGGCTGCAATTGTTCGCGGATGGGCTTTTGCCGAGTACTGTGATCTAGTCTGGA
TGGAGACATCAAGTCCTGATATGGTGGAATGCACAAAATTTTCTCAAGGAGTTAAGACTC
TAAGGCCTGAGCTGATGCTGGCTTACAATCTGTCTCCCTCATTCAATTGGGATGCATCAG
GGATGAATGATAACCAAATGATGGATTTCATTCCAAGAATAGCCAAATTAGGCTATTGCT
GGCAGTTCATTACTTTAGCTGGTTTCCATGCTGATGCACTCATCGTCGACACGTTTGCCA
AGGATTTCGCCAGGAGGGGAATGTTGGCCTATGTGGAGAAAATACAAAGAGAGGAGAGGA
GCAATGGTGTTGATACATTGGCTCATCAGAAATGGTCTGGGGCTAATTACTATGATAGAG
TTCTAAGGACTGTCCAGGGAGGCATCACTTCAACTGCTGCTATGGGAAAAGGTGTAACTG
AGGAGCAATTTGAGGAAAAATGGACAAGGACTGGGGCAACAAACTTAGGTGATGGAAGTG
TGGTGATTGCAAAGGCAAGGATGTAAGAAAATCAACAACAACAAACAAAAAAAAAAGTGA
TTTCTTTTGGAGTGTGAAGATTTGTGGAGCTTTGGAACTATCTCAATTTTTAGGTTGTGA
ACTTCAAGTACAATAAAAGATGTTTTTTAAGCATTTTAAATAATTCTTCAGGGATTTGAA
TCATTTTGGGCATTATTTTGACCTTCAAATTGCCTACTAGTGTGATCATTTGTATCTTTA
TCTATATTTGGACTTCCAAGTTGTGCTAAAGTTTTCAGTTGCTTATTAATGGAATATTTT
TTGATGCTTTTTCACAACTTATTATTCAAATTATAAAATTCTGGCAACTAAATACATTAT
TAAGATACAATTTCACAAGAAAAATGAAGATACGTAGAAGAAAGTTTGAAGGATTAACAG
CAAGTAATGTGTATTCTGAGTTAACTAATTTACTTCTTCCAAGGTTTGATCACAGATAGA
ACGATAATCGCGGCGATAATCAGAAGCAAAATAATGGCGATCATCATACATTTTCTTGAT
TTTTTCTGCAAGCTCTTTGCAGTTTGAAGTGCATCTGTACCCATATTAACATGATCCACT
GCATATCTCACCTGAAAATCCAAAGGAACAAATTTCATAAATTGTCACACAACTAAAAGT
TTTTCTGAAGAGTCACAACGCTATCATATTCATAATAACCGGAAAATGCAAAAGAATGTA
TAGTTGTGTGACTATTTTACGAAGGAGACACTATTTTACACATCAACCATGCTCATAAAA
AGTCAAATTAATCGCCTAAAAGTTAAGACCGTCAATCAACTGATTAAATTACATTAATAA
TAAATAAAATCATGTATAATATAGATGTAGGTAACTTGAAACAAAATCATAATGGATAGT
AGGGGAAGTTACATAAGTACTAACAAATGAGTAAAATATTCTACAACCTGTAATTATTAA
TTAAAATTACATAAAACTTATGAATGAGTAAATGAGAAATCCATAGGTAGGAACTTTTTT
ATAAATAAGGAGACTAAATCTGATTAGATTATATATTTCTTCCTTCAATTAAGATTTAAG
TCGACTAAATATGAACAATATTTAATATAATTAATTAGTTACCACAAAATTTTCATTCTG
GTACTATCTAATTAGGAAATATTATCATCAGAGGCTACAAATACTTTATTAGACATAATT
TGTATTTTCTTTCATTTAATTTCTTCTTCATAAAATTATGT