Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g052470.3.1
CDS Infomation

Syntaxin, putative (AHRD V3.3 *** B9SUS4_RICCO)
Sequence

ATGAATGATCTTCTAGCGGATTCAAGTTTTATTGCTGGCAAAGATAATGCTTCCAAAGAA
TCCGATATCGAGATGGGAAACCGATTTACGAGGAGCCAGTCAGATTCTGGAATCGACAGC
TTTAACAAGCAGATACAAGAAATCGAGAAACAAGTTGATAGACTTTCTGGTTTACTGAAG
ACTCTTAAGGATGCTAATGAGGAAACAAAGTCCGTAACTAAAGCATCAGCAATGAAAGCT
ATAAGGAAGCGGATGGAGAAAGATATAGATGAAGTTGGGAAGATTGCAAGAAATGTCAAA
GCAAAAATAGAAGCAACTAATAAAGAGAACTTGGCTAATCTACAAAAGCCTGGATGCGGA
AAGGGTACAAGTGTTGACAGATCAAGGACAAATATGACCAATTCCTTGACAAAGAAGTTC
AGAGATGTTATGACAGAATTTCAGACATTAAGGCAGAGGATAGACAATGAATATCGCGAG
GTTGTAGAGCGAAGGGTGATCACAGTAACTGGAACCAGACCAGATGAGGAGACAATCAAC
AACCTGATCGAAACTGGAAACAGTGAACAAATCTTCCAGAACGCTATCCAAGGAATGGGA
CGAGGACAGGTCTTAAGCACCGTAGAGGAAATTCAGGAAAGACACGATGCAGTGAAGGAA
ATTGAGAGAAAACTTCTTGATCTGCATCAGATATATCTTGATATGGCTGTTCTGGTTGAA
GCTCAAGGAGACTTGTTAGATAATATCGAAACACAGGTGAGATATGCAGTGGATCATGTT
AATATGGGTACAGATGCACTTCAAACTGCAAAGAGCTTGCAGAAAAAATCAAGAAAATGT
ATGATGATCGCCATTATTTTGCTTCTGATTATCGCCGCGATTATCGTTCTATCTGTGATC
AAACCTTGGAAGAAGTAA

Peptide Sequence

PEP ID

Solyc07g052470.3.1
PEP Infomation

Syntaxin, putative (AHRD V3.3 *** B9SUS4_RICCO)
Sequence

MNDLLADSSFIAGKDNASKESDIEMGNRFTRSQSDSGIDSFNKQIQEIEKQVDRLSGLLK
TLKDANEETKSVTKASAMKAIRKRMEKDIDEVGKIARNVKAKIEATNKENLANLQKPGCG
KGTSVDRSRTNMTNSLTKKFRDVMTEFQTLRQRIDNEYREVVERRVITVTGTRPDEETIN
NLIETGNSEQIFQNAIQGMGRGQVLSTVEEIQERHDAVKEIERKLLDLHQIYLDMAVLVE
AQGDLLDNIETQVRYAVDHVNMGTDALQTAKSLQKKSRKCMMIAIILLLIIAAIIVLSVI
KPWKK*

Transcript Sequence

Transcript ID

Solyc07g052470.3.1
Transcript Infomation

Syntaxin, putative (AHRD V3.3 *** B9SUS4_RICCO)
Sequence

CATAAATTAAGACGACCACTTATTAATTTGTTTCTATTTTTTTCTCGTCATTCTCGTCTT
CCCATTGTCACGCCGGTCACCCGGCCCATACAAAGACAAAATTTACACACACAAAGAAAA
ATCCCACAAACAAAAAAGATACTCCTAAAATATTGCCACCCTGTTGTTTTAACTTTCTTG
TTTTTTCTTTTTTTGTCTTTCGATCATCATCAGCAAGCACTAATTCTTCTTAGACGGCCA
TAAAGACTTCCTTTCACTAATTTTTGGAAAATATGAATGATCTTCTAGCGGATTCAAGTT
TTATTGCTGGCAAAGATAATGCTTCCAAAGAATCCGATATCGAGATGGGAAACCGATTTA
CGAGGAGCCAGTCAGATTCTGGAATCGACAGCTTTAACAAGCAGATACAAGAAATCGAGA
AACAAGTTGATAGACTTTCTGGTTTACTGAAGACTCTTAAGGATGCTAATGAGGAAACAA
AGTCCGTAACTAAAGCATCAGCAATGAAAGCTATAAGGAAGCGGATGGAGAAAGATATAG
ATGAAGTTGGGAAGATTGCAAGAAATGTCAAAGCAAAAATAGAAGCAACTAATAAAGAGA
ACTTGGCTAATCTACAAAAGCCTGGATGCGGAAAGGGTACAAGTGTTGACAGATCAAGGA
CAAATATGACCAATTCCTTGACAAAGAAGTTCAGAGATGTTATGACAGAATTTCAGACAT
TAAGGCAGAGGATAGACAATGAATATCGCGAGGTTGTAGAGCGAAGGGTGATCACAGTAA
CTGGAACCAGACCAGATGAGGAGACAATCAACAACCTGATCGAAACTGGAAACAGTGAAC
AAATCTTCCAGAACGCTATCCAAGGAATGGGACGAGGACAGGTCTTAAGCACCGTAGAGG
AAATTCAGGAAAGACACGATGCAGTGAAGGAAATTGAGAGAAAACTTCTTGATCTGCATC
AGATATATCTTGATATGGCTGTTCTGGTTGAAGCTCAAGGAGACTTGTTAGATAATATCG
AAACACAGGTGAGATATGCAGTGGATCATGTTAATATGGGTACAGATGCACTTCAAACTG
CAAAGAGCTTGCAGAAAAAATCAAGAAAATGTATGATGATCGCCATTATTTTGCTTCTGA
TTATCGCCGCGATTATCGTTCTATCTGTGATCAAACCTTGGAAGAAGTAAATTAGTTAAC
TCAGAATACACATTACTTGCTGTTAATCCTTCAAACTTTCTTCTACGTATCTTCATTTTT
CTTGTGAAATTGTATCTTAATAATGTATTTAGTTGCCAGAATTTTATAATTTGAATAATA
AGTTGTGAAAAAGCATCAAAAAATATTCCATTAATAAGCAACTGAAAACTTTAGCACAAC
TTGGAAGTCCAAATATAGATAAAGATACAAATGATCACACTAGTAGGCAATTTGAAGGTC
AAAATAATGCCCAAAATGATTCAAATCCCTGAAGAATTATTTAAAATGCTTAAAAAACAT
CTTTTATTGTACTTGAAGTTCACAACCTAAAAATTGAGATAGTTCCAAAGCTCCACAAAT
CTTCACACTCCAAAAGAAATCACTTTTTTTTTTGTTTGTTGTTGTTGATTTTCTTACATC
CTTGCCTTTGCAATCACCACACTTCCATCACCTAAGTTTGTTGCCCCAGTCCTTGTCCAT
TTTTCCTCAAATTGCTCCTCAGTTACACCTGTAATCACACCATATTTTGAATACAAACGT
TACTAATAATTCGTGTTTGAAGTTTAAGTTTTATACACTGACATGTAAAAAACGCGTAAA
ACTTAAATACCTTTTCCCATAGCAGCAGTTGAAGTGATGCCTCCCTGGACAGTCCTTAGA
ACTCTATCATAGTAATTAGCCCCAGACCATTTCTGATGAGCCAATGTATCAACACCATTG
CTCCTCTCCTCTCTTTGTATTTTCTCCACATAGGCCAACATTCCCCTCCTGGCGAAATCC
TTGGCAAACGTGTCGACGATGAGTGCATCAGCATGGAAACCAGCTAAAGTAATGAACTGC
CAGCAATAGCCTAATTTGGCTATTCTTGGAATGAAATCCATCATTTGGTTATCATTCATC
CCTGATGCATCCCAATTGAATGAGGGAGACAGATTGTAAGCCAGCATCAGCTCAGGCCTT
AGAGTCTTAACTCCTTGAGAAAATTTTGTGCATTCCACCATATCAGGACTTGATGTCTCC
ATCCAGACTAGATCACAGTACTCGGCAAAAGCCCATCCGCGAACAATTGCAGCCTCTACT
GAGCCCTGAAACCTGTAGAACCCTTCTCTGGTTCTAGGCAAGTCCCAGTCCCAAAAGAGA
TTAGGAAGGCCAAGTCTTTCAGCTACCTCCCTAGCTTGTTCGTGCGAAAGACATTTCTCA
TAGCTCGAATGATTCATCCATTCGTTCAACTTCCTCTGCTTCTCATACTCCGCGAGGTTC
ATTTTCTTGATTGCATCAGTGACACATTGAGAAAATGTCTTGAGTTCAGCCATTCCAAGC
CAGTTATCCTCAATGGCTTGAAGTTCCGGCCCTGTTTTGCCTGCAGCCATAGCTTCAGAC
AAAAGAGTAGCCAAACCCTTGCCCTTGAGATTCGGGTTGGAAGCACCCAAAATGAACTGA
TGATCCCTTGTATCCACATTGGTTTGGATCAATGTGGCTGCAACCGCATCAGTACGAGCC
ACGAGGACTGTCTCAGTCCCCATGACATCAAACTGCAACCTTGCAGCCACAAGCCTGTTA
ATATGTTCACTTACAGCAACAAGAACTTTACCAGCCATATGACCACATTTCTTAGTAACA
GAGGACTGATCCTCAATGTGGACACCAGCAGCACCGCGCTCCACGAAAAGCTTACACAGC
TTAACAGTAGCAGTTGCACCACCAAATCCAGTGTCACCATCAGCAATGATAGGTTTCAAG
TAATCAATGAAAGGGGTTCTTGCCCTCTCCTCTCTGCTCATGCTCATTCTTGCTTCTCTC
TGCTTCCTATCATGATACTGCTGAGCAAAAAACAAATGTTCCACTTTGTTCGGAACAGTA
TCATAAGGGTAATCAGCAAGATCAGGCCCTGGTTCATTAGTACTTGTGTGAGTTGAAGAA
CACTGCCAGCCAGATACATAAATAGTATCCAAATGCTTAGCCATCATAGTAACTTGAACA
GGGTCAAGTGCACCAAAAGTCCTTGAAGCTGTCCCATTAGCTTGATGAGTCTTGAGTGTC
CTCCATAGCTTCTGAGCCAACTCATTGGATGCATAACTTTGC