Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc07g051850.3.1
CDS Infomation

Aspartic proteinase, putative (AHRD V3.3 *** B9SVA7_RICCO)
Sequence

ATGGGTACTAGATATGGAGCCTGTTTAATTGCGGTGTGCTTGTTGCTTCTTTTATCCCCT
TTGGTGTTTTCGGTATCAAATGATGGACTGGTCAGAGTTGAAATTAAGAAGAGGAAGTTG
GATCAGACCAACCATGTTTTTGGGGGCATTGATTCTAATGGAGTGCATTCTGCACGGAAG
TATCGTCTTGGTGGAAATGTAGGAGATTCAGACTCTGGTATTATTGCACTAAAGAACTAC
TTGGATGCTCAGTACTTTGGTGAGATTAGCATTGGCTCACCACCTCAAAAGTTCACTGTC
ATCTTTGATACTGGAAGTTCTAATCTTTGGGTGCCCTCTGCTAAATGTCATTTTTCACTT
GCTTGTTATCTCCACCCAAAATACAAGTCAAGTCACTCCAGTACCTACAAAAAGAACGGG
ACATCTGCTGCAATCCACTATGGAACTGGATCAATTTCTGGATATTTTAGCAATGACAAT
GTCAAAGTTGGCGATCTCGTTGTCAAAGATCAGGACTTTATCGAGGCAACTCGAGAACCA
GGCATCACCTTTTTGGCAGCCAAGTTTGATGGTATTCTTGGACTTGGATTTCAAGAGATA
TCTGTAGGGAAAGCTGTCCCTGTCTGGTATAATATGGTAAATCAAGGTCTTGTTAAACAA
TCTGTCTTCTCATTCTGGTTCAATCGGAATGCTGAAGAGGAAGAAGGAGGTGAACTTGTT
TTCGGTGGAGTTGATCCCAATCATTTCAAGGGTGAACATACATATGTTCCTGTAACTCAC
AAAGGCTACTGGCAGTTTGATATGGGTGATGTGCTTGTCGGTGGTGAAACAACTGGATTT
TGTTCTGGTGGTTGTTCAGCAATTGCAGACTCTGGAACGTCCTTATTGGCAGGACCAACG
ACCATTATTACTCAAATAAATCATGCAATTGGAGCGTCAGGAGTTGTCAGCCAGGAGTGC
AAGTCAGTAGTCAGTGAATATGGAAAAACTATACTGGATCTACTCGAATCAAAGGCAGCG
CCTCAACAGATCTGCTCCCAAATCGGTTTATGCTCTAGGGATGGTGGAAAAGATGTTAGC
ATGATTATTGAGAGTGTGGTGGACAAACACAATGAGGCTTCGAATGGTGTGCATGACGAG
ATGTGCAGGGTTTGTGAGATGGCTGTGGTATGGATGCAAAACCAATTAAGGCGAAATGAA
ACTGCAGATAGAATCTTTGACTATATGAATAAGCTTTGCGACCGAATTCCCAGTCCAATG
GGAGAATCTGCAGTTGACTGCAACAGCCTTGCTTCCATGCCTAATGTTTCCTTTACCGTT
GGTGATAAAACATTTGAGCTGACGCCGCAGCAGTATGTCCTTAAAGTTGGCGAGGCTCCT
GTTGCACAGTGCATAAGTGGATTCACAGCATTAGATGTGCCGCCTCCTCGTGGACCCCTT
TGGATCTTGGGAGATGTTTTCATGGGTCGCTACCATACAGTGTTTGACTATGAGAAAATG
AGAGTTGGCTTTGCGGAAGCAGCTTAA

Peptide Sequence

PEP ID

Solyc07g051850.3.1
PEP Infomation

Aspartic proteinase, putative (AHRD V3.3 *** B9SVA7_RICCO)
Sequence

MGTRYGACLIAVCLLLLLSPLVFSVSNDGLVRVEIKKRKLDQTNHVFGGIDSNGVHSARK
YRLGGNVGDSDSGIIALKNYLDAQYFGEISIGSPPQKFTVIFDTGSSNLWVPSAKCHFSL
ACYLHPKYKSSHSSTYKKNGTSAAIHYGTGSISGYFSNDNVKVGDLVVKDQDFIEATREP
GITFLAAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVKQSVFSFWFNRNAEEEEGGELV
FGGVDPNHFKGEHTYVPVTHKGYWQFDMGDVLVGGETTGFCSGGCSAIADSGTSLLAGPT
TIITQINHAIGASGVVSQECKSVVSEYGKTILDLLESKAAPQQICSQIGLCSRDGGKDVS
MIIESVVDKHNEASNGVHDEMCRVCEMAVVWMQNQLRRNETADRIFDYMNKLCDRIPSPM
GESAVDCNSLASMPNVSFTVGDKTFELTPQQYVLKVGEAPVAQCISGFTALDVPPPRGPL
WILGDVFMGRYHTVFDYEKMRVGFAEAA*

Transcript Sequence

Transcript ID

Solyc07g051850.3.1
Transcript Infomation

Aspartic proteinase, putative (AHRD V3.3 *** B9SVA7_RICCO)
Sequence

TTTAATATATGCAACCTTGGGTTATGTGAGTAACCCAATTGGCTAAGTTAAAGCTCTATA
AGTTGACACACCATTCTTGTTTTGTTCATTCTAGGTTTCTCCTAAAAACCTAAAACTTTT
CAATTTTTTCGGTGTCGATTCTCTGTGCTAAGTATGGGTACTAGATATGGAGCCTGTTTA
ATTGCGGTGTGCTTGTTGCTTCTTTTATCCCCTTTGGTGTTTTCGGTATCAAATGATGGA
CTGGTCAGAGTTGAAATTAAGAAGAGGAAGTTGGATCAGACCAACCATGTTTTTGGGGGC
ATTGATTCTAATGGAGTGCATTCTGCACGGAAGTATCGTCTTGGTGGAAATGTAGGAGAT
TCAGACTCTGGTATTATTGCACTAAAGAACTACTTGGATGCTCAGTACTTTGGTGAGATT
AGCATTGGCTCACCACCTCAAAAGTTCACTGTCATCTTTGATACTGGAAGTTCTAATCTT
TGGGTGCCCTCTGCTAAATGTCATTTTTCACTTGCTTGTTATCTCCACCCAAAATACAAG
TCAAGTCACTCCAGTACCTACAAAAAGAACGGGACATCTGCTGCAATCCACTATGGAACT
GGATCAATTTCTGGATATTTTAGCAATGACAATGTCAAAGTTGGCGATCTCGTTGTCAAA
GATCAGGACTTTATCGAGGCAACTCGAGAACCAGGCATCACCTTTTTGGCAGCCAAGTTT
GATGGTATTCTTGGACTTGGATTTCAAGAGATATCTGTAGGGAAAGCTGTCCCTGTCTGG
TATAATATGGTAAATCAAGGTCTTGTTAAACAATCTGTCTTCTCATTCTGGTTCAATCGG
AATGCTGAAGAGGAAGAAGGAGGTGAACTTGTTTTCGGTGGAGTTGATCCCAATCATTTC
AAGGGTGAACATACATATGTTCCTGTAACTCACAAAGGCTACTGGCAGTTTGATATGGGT
GATGTGCTTGTCGGTGGTGAAACAACTGGATTTTGTTCTGGTGGTTGTTCAGCAATTGCA
GACTCTGGAACGTCCTTATTGGCAGGACCAACGACCATTATTACTCAAATAAATCATGCA
ATTGGAGCGTCAGGAGTTGTCAGCCAGGAGTGCAAGTCAGTAGTCAGTGAATATGGAAAA
ACTATACTGGATCTACTCGAATCAAAGGCAGCGCCTCAACAGATCTGCTCCCAAATCGGT
TTATGCTCTAGGGATGGTGGAAAAGATGTTAGCATGATTATTGAGAGTGTGGTGGACAAA
CACAATGAGGCTTCGAATGGTGTGCATGACGAGATGTGCAGGGTTTGTGAGATGGCTGTG
GTATGGATGCAAAACCAATTAAGGCGAAATGAAACTGCAGATAGAATCTTTGACTATATG
AATAAGCTTTGCGACCGAATTCCCAGTCCAATGGGAGAATCTGCAGTTGACTGCAACAGC
CTTGCTTCCATGCCTAATGTTTCCTTTACCGTTGGTGATAAAACATTTGAGCTGACGCCG
CAGCAGTATGTCCTTAAAGTTGGCGAGGCTCCTGTTGCACAGTGCATAAGTGGATTCACA
GCATTAGATGTGCCGCCTCCTCGTGGACCCCTTTGGATCTTGGGAGATGTTTTCATGGGT
CGCTACCATACAGTGTTTGACTATGAGAAAATGAGAGTTGGCTTTGCGGAAGCAGCTTAA
GCGCCTCAACATCTCTGTGTTGTGACCCGATTAGTATCACGTTGTCATTTAAACTAGAAA
ATTGTCTGCACTTGTAAATAAATAACTGATGCTTGAATCTTTTTGCTGGATTTTTTAACA
GCTGTTGTGTTATGACAGTAATTTGCCCGTCTATCGTAATTGCTGGTTAATTTGTAATAC
TAAAAGAAAATTACTCATCAATATCTACATCTTTTAAGTACTTTTTGAAGATTTAGATGA
AAATAGATTCAGTGTATTGTTGTAAATTGATTTCAAGTGTTTCCGAGAGTCATCTTCAAT
TATTTTAGCTTATGGTAGCTTTCATCAGTACGATAGAAGGGAACTTTAACATAACTAAAA
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